RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL13A1-207ENST00000478219 IL25Q9H293 177 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 WDR33Q9C0J8 1336 aaKnown RBP11.81□□□□□ -0.52
COL13A1-207ENST00000478219 TWISTNBQ3B726 338 aaPredicted RBP11.81□□□□□ -0.52
COL13A1-207ENST00000478219 LUZP1Q86V48 1076 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 ZBTB9Q96C00 473 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
COL13A1-207ENST00000478219 CCDC66A2RUB6 948 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 UBE2HP62256 183 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 SYCP1Q15431 976 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 DIAPH1O60610 1272 aaKnown RBP11.8□□□□□ -0.52
COL13A1-207ENST00000478219 HMOX1P09601 288 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 FBXO38Q6PIJ6 1188 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 AFAP1Q8N556 730 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
COL13A1-207ENST00000478219 ZNF215Q9UL58 517 aaPredicted RBP11.8□□□□□ -0.52
COL13A1-207ENST00000478219 USP27XA6NNY8 438 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 MCM2P49736 904 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 PDE1AP54750 535 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 ANO2Q9NQ90 1003 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 LRRC7Q96NW7 1537 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 CHGAP10645 457 aaKnown RBP11.79□□□□□ -0.52
COL13A1-207ENST00000478219 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 MEIS3Q99687 375 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 ZNF446Q9NWS9 450 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
COL13A1-207ENST00000478219 RGS12O14924 1447 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 FYB1O15117 783 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 ZSCAN22P10073 491 aaPredicted RBP11.78□□□□□ -0.52
COL13A1-207ENST00000478219 SLC20A2Q08357 652 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
COL13A1-207ENST00000478219 DNAJC2Q99543 621 aaKnown RBP11.78□□□□□ -0.52
COL13A1-207ENST00000478219 YEATS2Q9ULM3 1422 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 ERBB3P21860 1342 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
COL13A1-207ENST00000478219 NPHP1O15259 732 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 SYT1P21579 422 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
COL13A1-207ENST00000478219 CAMK4Q16566 473 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
COL13A1-207ENST00000478219 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 TULP4Q9NRJ4 1543 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 NSD2O96028 1365 aa11.78□□□□□ -0.52
COL13A1-207ENST00000478219 FAM83GA6ND36 823 aa11.77□□□□□ -0.52
COL13A1-207ENST00000478219 HNRNPH2P55795 449 aaKnown RBP11.77□□□□□ -0.52
COL13A1-207ENST00000478219 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.52
COL13A1-207ENST00000478219 ARID5BQ14865 1188 aa11.77□□□□□ -0.52
COL13A1-207ENST00000478219 ELF2Q15723 593 aa11.77□□□□□ -0.52
COL13A1-207ENST00000478219 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.52
COL13A1-207ENST00000478219 CCDC144CPQ8IYA2 1237 aa11.77□□□□□ -0.52
COL13A1-207ENST00000478219 CACTINQ8WUQ7 758 aaKnown RBP11.77□□□□□ -0.52
COL13A1-207ENST00000478219 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.52
COL13A1-207ENST00000478219 GOLGA6L6A8MZA4 724 aa11.77□□□□□ -0.53
COL13A1-207ENST00000478219 TPM3P06753 285 aa11.77□□□□□ -0.53
COL13A1-207ENST00000478219 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
COL13A1-207ENST00000478219 UNC5CLQ8IV45 518 aa11.77□□□□□ -0.53
COL13A1-207ENST00000478219 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
COL13A1-207ENST00000478219 ZNF853P0CG23 659 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 TPD52L1Q16890 204 aaPredicted RBP11.76□□□□□ -0.53
COL13A1-207ENST00000478219 ZNF397Q8NF99 534 aaPredicted RBP11.76□□□□□ -0.53
COL13A1-207ENST00000478219 MSH6P52701 1360 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 STX6O43752 255 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 F13A1P00488 732 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 DRC7Q8IY82 874 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 ADGRB1O14514 1584 aa11.76□□□□□ -0.53
COL13A1-207ENST00000478219 CHMLP26374 656 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
COL13A1-207ENST00000478219 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
COL13A1-207ENST00000478219 FEZ2Q9UHY8 353 aaPredicted RBP11.75□□□□□ -0.53
COL13A1-207ENST00000478219 FCHSD2O94868 740 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 LARGE1O95461 756 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 CKAP2LQ8IYA6 745 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 FAM200AQ8TCP9 573 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 RILPL2Q969X0 211 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 CALCOCO1Q9P1Z2 691 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 EXOC6BQ9Y2D4 811 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 PAXBP1Q9Y5B6 917 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 FAM135BQ49AJ0 1406 aa11.75□□□□□ -0.53
COL13A1-207ENST00000478219 KIF3BO15066 747 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 CPA1P15085 419 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms