RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
SYCP3-204ENST00000478139 HDGFL1Q5TGJ6 251 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 SLC4A10Q6U841 1118 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 NWD1Q149M9 1564 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 SLFN5Q08AF3 891 aa9.61□□□□□ -0.87
SYCP3-204ENST00000478139 DHX37Q8IY37 1157 aaKnown RBP9.61□□□□□ -0.87
SYCP3-204ENST00000478139 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
SYCP3-204ENST00000478139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYCP3-204ENST00000478139 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 BARGINQ6ZT62 677 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 SMC4Q9NTJ3 1288 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 FRAT2O75474 233 aaPredicted RBP9.6□□□□□ -0.87
SYCP3-204ENST00000478139 SLC39A6Q13433 755 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 RIC3Q7Z5B4 369 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 RTCBQ9Y3I0 505 aaKnown RBP9.6□□□□□ -0.87
SYCP3-204ENST00000478139 CPDO75976 1380 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 TAF7LQ5H9L4 462 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 BICDL1Q6ZP65 573 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 MIS18AQ9NYP9 233 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
SYCP3-204ENST00000478139 ROBO1Q9Y6N7 1651 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 PHLPP1O60346 1717 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 G3V3G9 751 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 SAMD1Q6SPF0 538 aaPredicted RBP9.59□□□□□ -0.87
SYCP3-204ENST00000478139 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 E9PSI1 815 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 MYL6BP14649 208 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 CCDC125Q86Z20 511 aa9.59□□□□□ -0.87
SYCP3-204ENST00000478139 XRN1Q8IZH2 1706 aaKnown RBP9.59□□□□□ -0.87
SYCP3-204ENST00000478139 RNMTO43148 476 aaKnown RBP9.58□□□□□ -0.88
SYCP3-204ENST00000478139 PHKG2P15735 406 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 FKBP5Q13451 457 aaPredicted RBP9.58□□□□□ -0.88
SYCP3-204ENST00000478139 CCDC30Q5VVM6 783 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 KIF1AQ12756 1690 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 NRXN3Q9Y4C0 1643 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
SYCP3-204ENST00000478139 ERVV-2B6SEH9 535 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 GNPATO15228 680 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 IGHDP01880 384 aa9.58□□□□□ -0.88
SYCP3-204ENST00000478139 SNRPA1P09661 255 aaKnown RBP9.58□□□□□ -0.88
SYCP3-204ENST00000478139 CHMP4BQ9H444 224 aaKnown RBP9.58□□□□□ -0.88
SYCP3-204ENST00000478139 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
SYCP3-204ENST00000478139 A0A087WZG4 1122 aa9.57□□□□□ -0.88
SYCP3-204ENST00000478139 HSP90B1P14625 803 aaKnown RBP9.57□□□□□ -0.88
SYCP3-204ENST00000478139 MAP3K5Q99683 1374 aa9.57□□□□□ -0.88
SYCP3-204ENST00000478139 ARHGEF28Q8N1W1 1705 aaKnown RBP9.57□□□□□ -0.88
SYCP3-204ENST00000478139 OS9Q13438 667 aaPredicted RBP9.56□□□□□ -0.88
SYCP3-204ENST00000478139 IGSF1Q8N6C5 1336 aa9.56□□□□□ -0.88
SYCP3-204ENST00000478139 FLAD1Q8NFF5 587 aa9.56□□□□□ -0.88
SYCP3-204ENST00000478139 MYOM1P52179 1685 aa9.56□□□□□ -0.88
SYCP3-204ENST00000478139 OVOS2A0A0G2JMS6 1433 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 OVOS2A0A0J9YW53 1432 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 PDE4CQ08493 712 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 OVOS2Q6IE36 1432 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 DEFB132Q7Z7B7 95 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
SYCP3-204ENST00000478139 PANK1Q8TE04 598 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 PHACTR3Q96KR7 559 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 ITSN1Q15811 1721 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 SEC24BO95487 1268 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 TWISTNBQ3B726 338 aaPredicted RBP9.55□□□□□ -0.88
SYCP3-204ENST00000478139 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 C9orf78Q9NZ63 289 aaPredicted RBP9.55□□□□□ -0.88
SYCP3-204ENST00000478139 COG6Q9Y2V7 657 aa9.55□□□□□ -0.88
SYCP3-204ENST00000478139 SLC52A2Q9HAB3 445 aa9.54□□□□□ -0.88
SYCP3-204ENST00000478139 LGR6Q9HBX8 967 aa9.54□□□□□ -0.88
SYCP3-204ENST00000478139 BCL2L13Q9BXK5 485 aa9.54□□□□□ -0.88
SYCP3-204ENST00000478139 LOC102724428A0A0B4J2F2 783 aa9.54□□□□□ -0.88
SYCP3-204ENST00000478139 SIK1P57059 783 aa9.54□□□□□ -0.88
SYCP3-204ENST00000478139 MARCH10Q8NA82 808 aaPredicted RBP9.54□□□□□ -0.88
SYCP3-204ENST00000478139 TSR2Q969E8 191 aaKnown RBP9.53□□□□□ -0.88
SYCP3-204ENST00000478139 PXDNQ92626 1479 aa9.53□□□□□ -0.88
SYCP3-204ENST00000478139 IFT172Q9UG01 1749 aa9.53□□□□□ -0.88
SYCP3-204ENST00000478139 KCNQ2O43526 872 aa9.53□□□□□ -0.88
SYCP3-204ENST00000478139 TXNRD1Q16881 649 aa9.53□□□□□ -0.88
SYCP3-204ENST00000478139 WDR63Q8IWG1 891 aa9.53□□□□□ -0.88
SYCP3-204ENST00000478139 KNDC1Q76NI1 1749 aa9.52□□□□□ -0.88
SYCP3-204ENST00000478139 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.88
SYCP3-204ENST00000478139 CYP27B1O15528 508 aa9.52□□□□□ -0.88
SYCP3-204ENST00000478139 EXOSC9Q06265 439 aaKnown RBP9.52□□□□□ -0.88
SYCP3-204ENST00000478139 ZNF790Q6PG37 636 aa9.52□□□□□ -0.88
SYCP3-204ENST00000478139 SLKQ9H2G2 1235 aaPredicted RBP9.52□□□□□ -0.88
SYCP3-204ENST00000478139 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.88
SYCP3-204ENST00000478139 PSDA5PKW4 1024 aaPredicted RBP9.52□□□□□ -0.89
SYCP3-204ENST00000478139 DNAJC10Q8IXB1 793 aa9.52□□□□□ -0.89
SYCP3-204ENST00000478139 ASAP1Q9ULH1 1129 aa9.52□□□□□ -0.89
SYCP3-204ENST00000478139 FMN2Q9NZ56 1722 aa9.52□□□□□ -0.89
SYCP3-204ENST00000478139 IFT57Q9NWB7 429 aa9.52□□□□□ -0.89
SYCP3-204ENST00000478139 KCNQ4P56696 695 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 CLUAP1Q96AJ1 413 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 TNNQ9UQP3 1299 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 ADGRB2O60241 1585 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 SLC4A2P04920 1241 aa9.51□□□□□ -0.89
SYCP3-204ENST00000478139 VIRMAQ69YN4 1812 aaKnown RBP9.51□□□□□ -0.89
SYCP3-204ENST00000478139 R3HDM1Q15032 1099 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms