RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 PPIP5K1Q6PFW1 1433 aa11.08□□□□□ -0.64
PTPRN-214ENST00000477819 HTRA3P83110 453 aa11.07□□□□□ -0.64
PTPRN-214ENST00000477819 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
PTPRN-214ENST00000477819 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
PTPRN-214ENST00000477819 CPSF1Q10570 1443 aaKnown RBP11.07□□□□□ -0.64
PTPRN-214ENST00000477819 G3V3G9 751 aa11.06□□□□□ -0.64
PTPRN-214ENST00000477819 PRELPP51888 382 aa11.06□□□□□ -0.64
PTPRN-214ENST00000477819 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
PTPRN-214ENST00000477819 TNS4Q8IZW8 715 aa11.06□□□□□ -0.64
PTPRN-214ENST00000477819 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-214ENST00000477819 SLC27A3Q5K4L6 730 aa11.05□□□□□ -0.64
PTPRN-214ENST00000477819 COL23A1Q86Y22 540 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-214ENST00000477819 CABP1Q9NZU7 370 aa11.05□□□□□ -0.64
PTPRN-214ENST00000477819 TRPM1Q7Z4N2 1603 aa11.05□□□□□ -0.64
PTPRN-214ENST00000477819 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
PTPRN-214ENST00000477819 ABCC6O95255 1503 aa11.04□□□□□ -0.64
PTPRN-214ENST00000477819 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
PTPRN-214ENST00000477819 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
PTPRN-214ENST00000477819 SNPHO15079 494 aa11.02□□□□□ -0.65
PTPRN-214ENST00000477819 CD2APQ9Y5K6 639 aa11.02□□□□□ -0.65
PTPRN-214ENST00000477819 IL2RBP14784 551 aa11.01□□□□□ -0.65
PTPRN-214ENST00000477819 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
PTPRN-214ENST00000477819 SYTL4Q96C24 671 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-214ENST00000477819 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
PTPRN-214ENST00000477819 TOMM70O94826 608 aa11□□□□□ -0.65
PTPRN-214ENST00000477819 PRIM1P49642 420 aaKnown RBP11□□□□□ -0.65
PTPRN-214ENST00000477819 KCNH5Q8NCM2 988 aa11□□□□□ -0.65
PTPRN-214ENST00000477819 KLRG1Q96E93 195 aa11□□□□□ -0.65
PTPRN-214ENST00000477819 WDR90Q96KV7 1748 aa11□□□□□ -0.65
PTPRN-214ENST00000477819 NFAT5O94916 1531 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 JMYQ8N9B5 988 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 NMRK2Q9NPI5 230 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
PTPRN-214ENST00000477819 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 TTC21BQ7Z4L5 1316 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 IGSF1Q8N6C5 1336 aa10.99□□□□□ -0.65
PTPRN-214ENST00000477819 RGL2O15211 777 aa10.98□□□□□ -0.65
PTPRN-214ENST00000477819 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
PTPRN-214ENST00000477819 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
PTPRN-214ENST00000477819 LY75O60449 1722 aa10.98□□□□□ -0.65
PTPRN-214ENST00000477819 SLC34A2O95436 690 aa10.97□□□□□ -0.65
PTPRN-214ENST00000477819 ERBB3P21860 1342 aa10.97□□□□□ -0.65
PTPRN-214ENST00000477819 QRICH2Q9H0J4 1663 aa10.96□□□□□ -0.65
PTPRN-214ENST00000477819 NSD2O96028 1365 aa10.96□□□□□ -0.65
PTPRN-214ENST00000477819 SMIM5Q71RC9 77 aa10.96□□□□□ -0.65
PTPRN-214ENST00000477819 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
PTPRN-214ENST00000477819 ANKRD24Q8TF21 1146 aa10.96□□□□□ -0.65
PTPRN-214ENST00000477819 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
PTPRN-214ENST00000477819 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
PTPRN-214ENST00000477819 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
PTPRN-214ENST00000477819 STK25O00506 426 aa10.95□□□□□ -0.66
PTPRN-214ENST00000477819 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
PTPRN-214ENST00000477819 AMIGO3Q86WK7 504 aa10.94□□□□□ -0.66
PTPRN-214ENST00000477819 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
PTPRN-214ENST00000477819 DOT1LQ8TEK3 1739 aa10.94□□□□□ -0.66
PTPRN-214ENST00000477819 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
PTPRN-214ENST00000477819 RBM46Q8TBY0 533 aaKnown RBP10.93□□□□□ -0.66
PTPRN-214ENST00000477819 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPRN-214ENST00000477819 LTV1Q96GA3 475 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-214ENST00000477819 TTC21AQ8NDW8 1320 aa10.91□□□□□ -0.66
PTPRN-214ENST00000477819 LTN1O94822 1766 aa10.91□□□□□ -0.66
PTPRN-214ENST00000477819 C5P01031 1676 aa10.9□□□□□ -0.66
PTPRN-214ENST00000477819 PHF14O94880 888 aa10.9□□□□□ -0.66
PTPRN-214ENST00000477819 HSPA1AP0DMV8 641 aaKnown RBP10.9□□□□□ -0.66
PTPRN-214ENST00000477819 HSPA1BP0DMV9 641 aaKnown RBP10.9□□□□□ -0.66
PTPRN-214ENST00000477819 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
PTPRN-214ENST00000477819 ARHGAP27Q6ZUM4 889 aa10.9□□□□□ -0.66
PTPRN-214ENST00000477819 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
PTPRN-214ENST00000477819 CICQ96RK0 1608 aaPredicted RBP10.9□□□□□ -0.66
PTPRN-214ENST00000477819 USP47Q96K76 1375 aa10.9□□□□□ -0.67
PTPRN-214ENST00000477819 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
PTPRN-214ENST00000477819 EMP3P54852 163 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 FSTL1Q12841 308 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 NME9Q86XW9 330 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
PTPRN-214ENST00000477819 KTN1Q86UP2 1357 aaKnown RBP10.89□□□□□ -0.67
PTPRN-214ENST00000477819 A0A0G2JLW4 131 aa10.88□□□□□ -0.67
PTPRN-214ENST00000477819 FLAD1Q8NFF5 587 aa10.88□□□□□ -0.67
PTPRN-214ENST00000477819 ZCRB1Q8TBF4 217 aaKnown RBP10.88□□□□□ -0.67
PTPRN-214ENST00000477819 KIAA1210Q9ULL0 1709 aa10.88□□□□□ -0.67
PTPRN-214ENST00000477819 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
PTPRN-214ENST00000477819 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
PTPRN-214ENST00000477819 EVC2Q86UK5 1308 aa10.87□□□□□ -0.67
PTPRN-214ENST00000477819 TOGARAM1Q9Y4F4 1720 aa10.87□□□□□ -0.67
PTPRN-214ENST00000477819 C9orf131Q5VYM1 1079 aa10.87□□□□□ -0.67
PTPRN-214ENST00000477819 RRAGCQ9HB90 399 aa10.87□□□□□ -0.67
PTPRN-214ENST00000477819 PXDNLA1KZ92 1463 aa10.87□□□□□ -0.67
PTPRN-214ENST00000477819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
PTPRN-214ENST00000477819 AK7Q96M32 723 aa10.86□□□□□ -0.67
PTPRN-214ENST00000477819 USP31Q70CQ4 1352 aa10.86□□□□□ -0.67
PTPRN-214ENST00000477819 RAB3GAP2Q9H2M9 1393 aa10.86□□□□□ -0.67
PTPRN-214ENST00000477819 KCPQ6ZWJ8 1503 aa10.85□□□□□ -0.67
PTPRN-214ENST00000477819 C4BP0C0L5 1744 aa10.85□□□□□ -0.67
PTPRN-214ENST00000477819 PALLDQ8WX93 1383 aa10.85□□□□□ -0.67
PTPRN-214ENST00000477819 RGPD2P0DJD1 1756 aa10.85□□□□□ -0.67
PTPRN-214ENST00000477819 UBR3Q6ZT12 1888 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms