RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
HLA-DMA-208ENST00000477541 ZDHHC9Q9Y397 364 aa16.49■□□□□ 0.23
HLA-DMA-208ENST00000477541 BRD1O95696 1058 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 PRIM1P49642 420 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 NME9Q86XW9 330 aa16.48■□□□□ 0.23
HLA-DMA-208ENST00000477541 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
HLA-DMA-208ENST00000477541 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
HLA-DMA-208ENST00000477541 PDE1AP54750 535 aa16.47■□□□□ 0.23
HLA-DMA-208ENST00000477541 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
HLA-DMA-208ENST00000477541 CRB1P82279 1406 aa16.46■□□□□ 0.23
HLA-DMA-208ENST00000477541 ANKLE2Q86XL3 938 aa16.46■□□□□ 0.23
HLA-DMA-208ENST00000477541 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
HLA-DMA-208ENST00000477541 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
HLA-DMA-208ENST00000477541 PXDNLA1KZ92 1463 aa16.46■□□□□ 0.23
HLA-DMA-208ENST00000477541 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
HLA-DMA-208ENST00000477541 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 PKNOX2Q96KN3 472 aa16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 NUDT16Q96DE0 195 aaKnown RBP16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 TMX3Q96JJ7 454 aa16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 ESYT1Q9BSJ8 1104 aa16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
HLA-DMA-208ENST00000477541 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
HLA-DMA-208ENST00000477541 PKP1Q13835 747 aa16.44■□□□□ 0.22
HLA-DMA-208ENST00000477541 TSPY26PQ9H489 355 aa16.44■□□□□ 0.22
HLA-DMA-208ENST00000477541 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
HLA-DMA-208ENST00000477541 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
HLA-DMA-208ENST00000477541 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 NPHP4O75161 1426 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 FAM83GA6ND36 823 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 GNAI2P04899 355 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 GNAI3P08754 354 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 SASS6Q6UVJ0 657 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 OTUD7AQ8TE49 926 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 MEIS3Q99687 375 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 STAP2Q9UGK3 403 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 TNRQ92752 1358 aa16.43■□□□□ 0.22
HLA-DMA-208ENST00000477541 NEK4P51957 841 aa16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-208ENST00000477541 SYCE3A1L190 88 aa16.41■□□□□ 0.22
HLA-DMA-208ENST00000477541 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
HLA-DMA-208ENST00000477541 FBLN1P23142 703 aa16.41■□□□□ 0.22
HLA-DMA-208ENST00000477541 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-208ENST00000477541 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
HLA-DMA-208ENST00000477541 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
HLA-DMA-208ENST00000477541 R3HCC1Q9Y3T6 440 aaKnown RBP16.4■□□□□ 0.22
HLA-DMA-208ENST00000477541 STRCP1A6NGW2 1772 aa16.4■□□□□ 0.22
HLA-DMA-208ENST00000477541 PEAK1Q9H792 1746 aa16.39■□□□□ 0.22
HLA-DMA-208ENST00000477541 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 MX1P20591 662 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 SULT6B1Q6IMI4 303 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 FBXO31Q5XUX0 539 aaPredicted RBP16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
HLA-DMA-208ENST00000477541 UQCRHLA0A096LP55 91 aa16.38■□□□□ 0.21
HLA-DMA-208ENST00000477541 UQCRHP07919 91 aa16.38■□□□□ 0.21
HLA-DMA-208ENST00000477541 CHMLP26374 656 aa16.38■□□□□ 0.21
HLA-DMA-208ENST00000477541 KDRP35968 1356 aa16.37■□□□□ 0.21
HLA-DMA-208ENST00000477541 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-208ENST00000477541 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
HLA-DMA-208ENST00000477541 PRIMPOLQ96LW4 560 aa16.37■□□□□ 0.21
HLA-DMA-208ENST00000477541 STK31Q9BXU1 1019 aa16.37■□□□□ 0.21
HLA-DMA-208ENST00000477541 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
HLA-DMA-208ENST00000477541 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
HLA-DMA-208ENST00000477541 ATP6V1DQ9Y5K8 247 aa16.36■□□□□ 0.21
HLA-DMA-208ENST00000477541 METP08581 1390 aa16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 USP6P35125 1406 aa16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 CRYBG1Q9Y4K1 1723 aa16.35■□□□□ 0.21
HLA-DMA-208ENST00000477541 TTC21AQ8NDW8 1320 aa16.34■□□□□ 0.21
HLA-DMA-208ENST00000477541 PTMAP06454 111 aaKnown RBP16.34■□□□□ 0.21
HLA-DMA-208ENST00000477541 TPM3P06753 285 aa16.34■□□□□ 0.21
HLA-DMA-208ENST00000477541 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
HLA-DMA-208ENST00000477541 HSPA4P34932 840 aa16.33■□□□□ 0.21
HLA-DMA-208ENST00000477541 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.21
HLA-DMA-208ENST00000477541 MCM10Q7L590 875 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms