RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
COL27A1-204ENST00000477421 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
COL27A1-204ENST00000477421 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
COL27A1-204ENST00000477421 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
COL27A1-204ENST00000477421 ATP5J2-PTCD1G3V325 749 aa13.26□□□□□ -0.29
COL27A1-204ENST00000477421 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
COL27A1-204ENST00000477421 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
COL27A1-204ENST00000477421 INSRP06213 1382 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 METP08581 1390 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 MCM2P49736 904 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 MYD88Q99836 296 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
COL27A1-204ENST00000477421 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-204ENST00000477421 SYCE3A1L190 88 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 PPFIA3O75145 1194 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 CYP46A1Q9Y6A2 500 aa13.25□□□□□ -0.29
COL27A1-204ENST00000477421 CPLX1O14810 134 aa13.24□□□□□ -0.29
COL27A1-204ENST00000477421 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
COL27A1-204ENST00000477421 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
COL27A1-204ENST00000477421 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
COL27A1-204ENST00000477421 CDC42BPBQ9Y5S2 1711 aa13.24□□□□□ -0.29
COL27A1-204ENST00000477421 CCDC83Q8IWF9 413 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 ZFYVE16Q7Z3T8 1539 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 ADRA2BP18089 450 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL27A1-204ENST00000477421 CHL1O00533 1208 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
COL27A1-204ENST00000477421 ZGPATQ8N5A5 531 aaKnown RBP13.23□□□□□ -0.29
COL27A1-204ENST00000477421 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 BECN2A8MW95 431 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 BAG4O95429 457 aaKnown RBP13.22□□□□□ -0.29
COL27A1-204ENST00000477421 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
COL27A1-204ENST00000477421 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
COL27A1-204ENST00000477421 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
COL27A1-204ENST00000477421 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 MSH6P52701 1360 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
COL27A1-204ENST00000477421 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
COL27A1-204ENST00000477421 FLT4P35916 1363 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.29
COL27A1-204ENST00000477421 MBD3O95983 291 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 HOXC9P31274 260 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 PSMA5P28066 241 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 ORAI2Q96SN7 254 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.29
COL27A1-204ENST00000477421 XRCC6P12956 609 aaKnown RBP eCLIP13.21□□□□□ -0.3
COL27A1-204ENST00000477421 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.3
COL27A1-204ENST00000477421 UBE3BQ7Z3V4 1068 aa13.21□□□□□ -0.3
COL27A1-204ENST00000477421 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 NRDCO43847 1150 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 R3HCC1Q9Y3T6 440 aaKnown RBP13.2□□□□□ -0.3
COL27A1-204ENST00000477421 CLTCL1P53675 1640 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 ESPNB1AK53 854 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 TMX3Q96JJ7 454 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 ZBTB3Q9H5J0 574 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
COL27A1-204ENST00000477421 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
COL27A1-204ENST00000477421 HSP90AA2PQ14568 343 aaPredicted RBP13.2□□□□□ -0.3
COL27A1-204ENST00000477421 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
COL27A1-204ENST00000477421 A0A087WZG4 1122 aa13.19□□□□□ -0.3
COL27A1-204ENST00000477421 TRDNQ13061 729 aa13.19□□□□□ -0.3
COL27A1-204ENST00000477421 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
COL27A1-204ENST00000477421 GCP02774 474 aa13.19□□□□□ -0.3
COL27A1-204ENST00000477421 ATP8B2P98198 1209 aa13.19□□□□□ -0.3
COL27A1-204ENST00000477421 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
COL27A1-204ENST00000477421 DHX37Q8IY37 1157 aaKnown RBP13.18□□□□□ -0.3
COL27A1-204ENST00000477421 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 IQGAP3Q86VI3 1631 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 SYNMO15061 1565 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 NFXL1Q6ZNB6 911 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 MYOM2P54296 1465 aa13.18□□□□□ -0.3
COL27A1-204ENST00000477421 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 NFATC2IPQ8NCF5 419 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 PIK3R4Q99570 1358 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 CPA1P15085 419 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
COL27A1-204ENST00000477421 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
COL27A1-204ENST00000477421 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
COL27A1-204ENST00000477421 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms