RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
LINC00996-201ENST00000477392 RBM25P49756 843 aaKnown RBP19.54■□□□□ 0.72
LINC00996-201ENST00000477392 FKBP5Q13451 457 aaPredicted RBP19.54■□□□□ 0.72
LINC00996-201ENST00000477392 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
LINC00996-201ENST00000477392 ZNF530Q6P9A1 599 aaPredicted RBP19.54■□□□□ 0.72
LINC00996-201ENST00000477392 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
LINC00996-201ENST00000477392 TBC1D9Q6ZT07 1266 aa19.54■□□□□ 0.72
LINC00996-201ENST00000477392 AXIN2Q9Y2T1 843 aa19.54■□□□□ 0.72
LINC00996-201ENST00000477392 DCCP43146 1447 aa19.54■□□□□ 0.72
LINC00996-201ENST00000477392 TMEM94Q12767 1356 aa19.54■□□□□ 0.72
LINC00996-201ENST00000477392 OVOS2A0A0G2JMS6 1433 aa19.53■□□□□ 0.72
LINC00996-201ENST00000477392 EIF4A1P60842 406 aaKnown RBP19.53■□□□□ 0.72
LINC00996-201ENST00000477392 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
LINC00996-201ENST00000477392 C16orf71Q8IYS4 520 aaPredicted RBP19.53■□□□□ 0.72
LINC00996-201ENST00000477392 ADAMTS7Q9UKP4 1686 aa19.53■□□□□ 0.72
LINC00996-201ENST00000477392 HDGFL1Q5TGJ6 251 aa19.52■□□□□ 0.72
LINC00996-201ENST00000477392 ANTXR1Q9H6X2 564 aa19.52■□□□□ 0.72
LINC00996-201ENST00000477392 CRYBG1Q9Y4K1 1723 aa19.52■□□□□ 0.72
LINC00996-201ENST00000477392 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
LINC00996-201ENST00000477392 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.71
LINC00996-201ENST00000477392 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
LINC00996-201ENST00000477392 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
LINC00996-201ENST00000477392 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
LINC00996-201ENST00000477392 SMARCA5O60264 1052 aaPredicted RBP19.51■□□□□ 0.71
LINC00996-201ENST00000477392 HMMRO75330 724 aa19.51■□□□□ 0.71
LINC00996-201ENST00000477392 GNAI2P04899 355 aa19.51■□□□□ 0.71
LINC00996-201ENST00000477392 NCOA3Q9Y6Q9 1424 aa19.5■□□□□ 0.71
LINC00996-201ENST00000477392 COL18A1P39060 1754 aa19.5■□□□□ 0.71
LINC00996-201ENST00000477392 KCNQ3O43525 872 aa19.5■□□□□ 0.71
LINC00996-201ENST00000477392 CDC45O75419 566 aa19.5■□□□□ 0.71
LINC00996-201ENST00000477392 HOXB7P09629 217 aa19.5■□□□□ 0.71
LINC00996-201ENST00000477392 MPRIPQ6WCQ1 1025 aa19.5■□□□□ 0.71
LINC00996-201ENST00000477392 SLKQ9H2G2 1235 aaPredicted RBP19.5■□□□□ 0.71
LINC00996-201ENST00000477392 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
LINC00996-201ENST00000477392 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
LINC00996-201ENST00000477392 ERBB3P21860 1342 aa19.48■□□□□ 0.71
LINC00996-201ENST00000477392 FRAT2O75474 233 aaPredicted RBP19.48■□□□□ 0.71
LINC00996-201ENST00000477392 GNAI3P08754 354 aa19.48■□□□□ 0.71
LINC00996-201ENST00000477392 TEFQ10587 303 aa19.48■□□□□ 0.71
LINC00996-201ENST00000477392 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
LINC00996-201ENST00000477392 TUBGCP6Q96RT7 1819 aa19.48■□□□□ 0.71
LINC00996-201ENST00000477392 APBB1O00213 710 aa19.47■□□□□ 0.71
LINC00996-201ENST00000477392 ATF3P18847 181 aa19.47■□□□□ 0.71
LINC00996-201ENST00000477392 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
LINC00996-201ENST00000477392 BTBD11A6QL63 1104 aa19.46■□□□□ 0.71
LINC00996-201ENST00000477392 C1orf141Q5JVX7 400 aa19.46■□□□□ 0.71
LINC00996-201ENST00000477392 KIF2CQ99661 725 aa19.46■□□□□ 0.71
LINC00996-201ENST00000477392 EIF2S2P20042 333 aaKnown RBP19.45■□□□□ 0.7
LINC00996-201ENST00000477392 ZC3H6P61129 1189 aaKnown RBP19.45■□□□□ 0.7
LINC00996-201ENST00000477392 USP44Q9H0E7 712 aa19.45■□□□□ 0.7
LINC00996-201ENST00000477392 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
LINC00996-201ENST00000477392 CHPF2Q9P2E5 772 aa19.45■□□□□ 0.7
LINC00996-201ENST00000477392 SCN11AQ9UI33 1791 aa19.44■□□□□ 0.7
LINC00996-201ENST00000477392 PNMA6EA0A0J9YXQ4 647 aa19.44■□□□□ 0.7
LINC00996-201ENST00000477392 HEG1Q9ULI3 1381 aa19.44■□□□□ 0.7
LINC00996-201ENST00000477392 ATP8B2P98198 1209 aa19.44■□□□□ 0.7
LINC00996-201ENST00000477392 LRRFIP2Q9Y608 721 aaKnown RBP19.44■□□□□ 0.7
LINC00996-201ENST00000477392 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
LINC00996-201ENST00000477392 ABCC6O95255 1503 aa19.44■□□□□ 0.7
LINC00996-201ENST00000477392 SNX21Q969T3 373 aa19.43■□□□□ 0.7
LINC00996-201ENST00000477392 EXOC6BQ9Y2D4 811 aa19.42■□□□□ 0.7
LINC00996-201ENST00000477392 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
LINC00996-201ENST00000477392 SDSP20132 328 aa19.42■□□□□ 0.7
LINC00996-201ENST00000477392 HSCBQ8IWL3 235 aa19.42■□□□□ 0.7
LINC00996-201ENST00000477392 OSBPL3Q9H4L5 887 aa19.42■□□□□ 0.7
LINC00996-201ENST00000477392 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
LINC00996-201ENST00000477392 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
LINC00996-201ENST00000477392 UBTFL1P0CB47 393 aaPredicted RBP19.41■□□□□ 0.7
LINC00996-201ENST00000477392 SPRYD3Q8NCJ5 442 aa19.41■□□□□ 0.7
LINC00996-201ENST00000477392 MEGF6O75095 1541 aa19.4■□□□□ 0.7
LINC00996-201ENST00000477392 ADCY9O60503 1353 aa19.4■□□□□ 0.7
LINC00996-201ENST00000477392 HSPA2P54652 639 aa19.4■□□□□ 0.7
LINC00996-201ENST00000477392 CADPS2Q86UW7 1296 aa19.4■□□□□ 0.7
LINC00996-201ENST00000477392 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
LINC00996-201ENST00000477392 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
LINC00996-201ENST00000477392 ANXA1P04083 346 aa19.39■□□□□ 0.69
LINC00996-201ENST00000477392 PDE1AP54750 535 aa19.39■□□□□ 0.69
LINC00996-201ENST00000477392 C5P01031 1676 aa19.39■□□□□ 0.69
LINC00996-201ENST00000477392 KDM6AO15550 1401 aaPredicted RBP19.39■□□□□ 0.69
LINC00996-201ENST00000477392 GIGYF1O75420 1035 aaPredicted RBP19.39■□□□□ 0.69
LINC00996-201ENST00000477392 BEND3Q5T5X7 828 aa19.39■□□□□ 0.69
LINC00996-201ENST00000477392 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
LINC00996-201ENST00000477392 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
LINC00996-201ENST00000477392 LRRCC1Q9C099 1032 aa19.38■□□□□ 0.69
LINC00996-201ENST00000477392 PI4KAP2A4QPH2 592 aa19.37■□□□□ 0.69
LINC00996-201ENST00000477392 PI4KAP1Q8N8J0 262 aa19.37■□□□□ 0.69
LINC00996-201ENST00000477392 CABLES1Q8TDN4 633 aa19.37■□□□□ 0.69
LINC00996-201ENST00000477392 SSH3Q8TE77 659 aa19.37■□□□□ 0.69
LINC00996-201ENST00000477392 NLRP2Q9NX02 1062 aa19.37■□□□□ 0.69
LINC00996-201ENST00000477392 DBF4Q9UBU7 674 aaPredicted RBP19.37■□□□□ 0.69
LINC00996-201ENST00000477392 SPATA31A3Q5VYP0 1347 aa19.36■□□□□ 0.69
LINC00996-201ENST00000477392 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
LINC00996-201ENST00000477392 EIF5BO60841 1220 aaKnown RBP19.36■□□□□ 0.69
LINC00996-201ENST00000477392 STRCQ7RTU9 1775 aa19.36■□□□□ 0.69
LINC00996-201ENST00000477392 CD2BP2O95400 341 aaKnown RBP19.35■□□□□ 0.69
LINC00996-201ENST00000477392 POLA2Q14181 598 aa19.35■□□□□ 0.69
LINC00996-201ENST00000477392 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
LINC00996-201ENST00000477392 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
LINC00996-201ENST00000477392 DDIT3P35638 169 aa19.35■□□□□ 0.69
LINC00996-201ENST00000477392 MRC1P22897 1456 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms