RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 UVSSAQ2YD98 709 aa18.59■□□□□ 0.57
CLSTN1-205ENST00000477264 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
CLSTN1-205ENST00000477264 TTC22Q5TAA0 569 aa18.59■□□□□ 0.57
CLSTN1-205ENST00000477264 FAM184AQ8NB25 1140 aa18.59■□□□□ 0.57
CLSTN1-205ENST00000477264 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
CLSTN1-205ENST00000477264 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
CLSTN1-205ENST00000477264 SYCE3A1L190 88 aa18.58■□□□□ 0.56
CLSTN1-205ENST00000477264 KIF20AO95235 890 aa18.58■□□□□ 0.56
CLSTN1-205ENST00000477264 GSPT1P15170 499 aaKnown RBP18.58■□□□□ 0.56
CLSTN1-205ENST00000477264 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
CLSTN1-205ENST00000477264 RBM27Q9P2N5 1060 aaKnown RBP18.58■□□□□ 0.56
CLSTN1-205ENST00000477264 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
CLSTN1-205ENST00000477264 U2SURPO15042 1029 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-205ENST00000477264 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
CLSTN1-205ENST00000477264 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
CLSTN1-205ENST00000477264 ATF3P18847 181 aa18.57■□□□□ 0.56
CLSTN1-205ENST00000477264 PIBF1Q8WXW3 757 aa18.57■□□□□ 0.56
CLSTN1-205ENST00000477264 REC8O95072 547 aa18.56■□□□□ 0.56
CLSTN1-205ENST00000477264 MCM2P49736 904 aa18.56■□□□□ 0.56
CLSTN1-205ENST00000477264 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
CLSTN1-205ENST00000477264 ZSCAN20P17040 1043 aaPredicted RBP18.55■□□□□ 0.56
CLSTN1-205ENST00000477264 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
CLSTN1-205ENST00000477264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.55■□□□□ 0.561e-7■■■■■ 27.2
CLSTN1-205ENST00000477264 LETM1O95202 739 aaPredicted RBP18.55■□□□□ 0.56
CLSTN1-205ENST00000477264 ZDHHC9Q9Y397 364 aa18.55■□□□□ 0.56
CLSTN1-205ENST00000477264 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
CLSTN1-205ENST00000477264 PKP1Q13835 747 aa18.54■□□□□ 0.56
CLSTN1-205ENST00000477264 PNPLA6Q8IY17 1366 aa18.54■□□□□ 0.56
CLSTN1-205ENST00000477264 DCCP43146 1447 aa18.54■□□□□ 0.56
CLSTN1-205ENST00000477264 SIRT2Q8IXJ6 389 aa18.54■□□□□ 0.56
CLSTN1-205ENST00000477264 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
CLSTN1-205ENST00000477264 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
CLSTN1-205ENST00000477264 OVOS2A0A0J9YW53 1432 aa18.53■□□□□ 0.56
CLSTN1-205ENST00000477264 OVOS2Q6IE36 1432 aa18.53■□□□□ 0.56
CLSTN1-205ENST00000477264 PSME1Q06323 249 aa18.53■□□□□ 0.56
CLSTN1-205ENST00000477264 DNTTIP2Q5QJE6 756 aaKnown RBP18.53■□□□□ 0.56
CLSTN1-205ENST00000477264 FBLN1P23142 703 aa18.52■□□□□ 0.56
CLSTN1-205ENST00000477264 MSH6P52701 1360 aa18.52■□□□□ 0.56
CLSTN1-205ENST00000477264 DCTPP1Q9H773 170 aa18.52■□□□□ 0.56
CLSTN1-205ENST00000477264 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-205ENST00000477264 CADPS2Q86UW7 1296 aa18.51■□□□□ 0.55
CLSTN1-205ENST00000477264 ZGPATQ8N5A5 531 aaKnown RBP18.51■□□□□ 0.55
CLSTN1-205ENST00000477264 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
CLSTN1-205ENST00000477264 SPTLC3Q9NUV7 552 aa18.51■□□□□ 0.55
CLSTN1-205ENST00000477264 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 FCHSD2O94868 740 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 BRD1O95696 1058 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 ABTB2Q8N961 1025 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 KIF3AQ9Y496 699 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 C1orf167Q5SNV9 1468 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 TUBGCP6Q96RT7 1819 aa18.5■□□□□ 0.55
CLSTN1-205ENST00000477264 NLRP6P59044 892 aa18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 EMILIN1Q9Y6C2 1016 aa18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 KIF1AQ12756 1690 aa18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 VAMP4O75379 141 aa18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 FKBP5Q13451 457 aaPredicted RBP18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 RRS1Q15050 365 aaKnown RBP18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
CLSTN1-205ENST00000477264 NOLC1Q14978 699 aaKnown RBP eCLIP18.48■□□□□ 0.552e-8■□□□□ 10.4
CLSTN1-205ENST00000477264 ZNF710Q8N1W2 664 aa18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 XIRP1Q702N8 1843 aaKnown RBP18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 FOXO3O43524 673 aa18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 GNAI1P63096 354 aa18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 TAF3Q5VWG9 929 aa18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
CLSTN1-205ENST00000477264 CUL4AQ13619 759 aa18.47■□□□□ 0.55
CLSTN1-205ENST00000477264 RNF214Q8ND24 703 aa18.47■□□□□ 0.55
CLSTN1-205ENST00000477264 MST1RQ04912 1400 aa18.47■□□□□ 0.55
CLSTN1-205ENST00000477264 ERC2O15083 957 aa18.47■□□□□ 0.55
CLSTN1-205ENST00000477264 TPM3P06753 285 aa18.47■□□□□ 0.55
CLSTN1-205ENST00000477264 DIAPH3Q9NSV4 1193 aa18.47■□□□□ 0.55
CLSTN1-205ENST00000477264 ATP10DQ9P241 1426 aa18.46■□□□□ 0.55
CLSTN1-205ENST00000477264 DLG5Q8TDM6 1919 aa18.46■□□□□ 0.55
CLSTN1-205ENST00000477264 SOX12O15370 315 aa18.46■□□□□ 0.55
CLSTN1-205ENST00000477264 NSFL1CQ9UNZ2 370 aaKnown RBP18.46■□□□□ 0.55
CLSTN1-205ENST00000477264 ARID3AQ99856 593 aa18.45■□□□□ 0.54
CLSTN1-205ENST00000477264 SDSP20132 328 aa18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
CLSTN1-205ENST00000477264 TMEM87AQ8NBN3 555 aa18.43■□□□□ 0.54
CLSTN1-205ENST00000477264 PPP4R3BQ5MIZ7 849 aa18.42■□□□□ 0.54
CLSTN1-205ENST00000477264 TMX3Q96JJ7 454 aa18.42■□□□□ 0.54
CLSTN1-205ENST00000477264 MCCP23508 829 aa18.42■□□□□ 0.54
CLSTN1-205ENST00000477264 ANAPC15P60006 121 aa18.42■□□□□ 0.54
CLSTN1-205ENST00000477264 CCDC183Q5T5S1 534 aa18.42■□□□□ 0.54
CLSTN1-205ENST00000477264 KRT28Q7Z3Y7 464 aa18.42■□□□□ 0.54
CLSTN1-205ENST00000477264 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
CLSTN1-205ENST00000477264 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
CLSTN1-205ENST00000477264 PDCL2Q8N4E4 241 aa18.41■□□□□ 0.54
CLSTN1-205ENST00000477264 IL17RAQ96F46 866 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms