RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 AKAP4Q5JQC9 854 aa14.38□□□□□ -0.11
NUP188-205ENST00000477069 C22orf23Q9BZE7 217 aa14.38□□□□□ -0.11
NUP188-205ENST00000477069 LGR6Q9HBX8 967 aa14.38□□□□□ -0.11
NUP188-205ENST00000477069 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
NUP188-205ENST00000477069 MFAP1P55081 439 aaKnown RBP14.37□□□□□ -0.11
NUP188-205ENST00000477069 ANKRD24Q8TF21 1146 aa14.37□□□□□ -0.11
NUP188-205ENST00000477069 BECN1Q14457 450 aa14.36□□□□□ -0.11
NUP188-205ENST00000477069 SCN11AQ9UI33 1791 aa14.36□□□□□ -0.11
NUP188-205ENST00000477069 EIF4A1P60842 406 aaKnown RBP14.36□□□□□ -0.11
NUP188-205ENST00000477069 AMOTQ4VCS5 1084 aa14.36□□□□□ -0.11
NUP188-205ENST00000477069 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
NUP188-205ENST00000477069 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
NUP188-205ENST00000477069 RBM25P49756 843 aaKnown RBP14.35□□□□□ -0.11
NUP188-205ENST00000477069 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
NUP188-205ENST00000477069 HOXB7P09629 217 aa14.35□□□□□ -0.11
NUP188-205ENST00000477069 GSPT1P15170 499 aaKnown RBP14.35□□□□□ -0.11
NUP188-205ENST00000477069 PLEKHO1Q53GL0 409 aaPredicted RBP14.35□□□□□ -0.11
NUP188-205ENST00000477069 TBC1D2Q9BYX2 928 aa14.35□□□□□ -0.11
NUP188-205ENST00000477069 STRCQ7RTU9 1775 aa14.34□□□□□ -0.11
NUP188-205ENST00000477069 ZNF530Q6P9A1 599 aaPredicted RBP14.34□□□□□ -0.11
NUP188-205ENST00000477069 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
NUP188-205ENST00000477069 ERBB3P21860 1342 aa14.34□□□□□ -0.11
NUP188-205ENST00000477069 PKD1L3Q7Z443 1732 aa14.33□□□□□ -0.11
NUP188-205ENST00000477069 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.11
NUP188-205ENST00000477069 FKBP5Q13451 457 aaPredicted RBP14.33□□□□□ -0.12
NUP188-205ENST00000477069 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
NUP188-205ENST00000477069 ANTXR1Q9H6X2 564 aa14.33□□□□□ -0.12
NUP188-205ENST00000477069 TNS3Q68CZ2 1445 aa14.33□□□□□ -0.12
NUP188-205ENST00000477069 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
NUP188-205ENST00000477069 NECTIN2Q92692 538 aa14.33□□□□□ -0.12
NUP188-205ENST00000477069 RNMTO43148 476 aaKnown RBP14.32□□□□□ -0.12
NUP188-205ENST00000477069 ATF3P18847 181 aa14.32□□□□□ -0.12
NUP188-205ENST00000477069 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
NUP188-205ENST00000477069 TBC1D9Q6ZT07 1266 aa14.32□□□□□ -0.12
NUP188-205ENST00000477069 KCNQ3O43525 872 aa14.32□□□□□ -0.12
NUP188-205ENST00000477069 GNAI2P04899 355 aa14.32□□□□□ -0.12
NUP188-205ENST00000477069 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
NUP188-205ENST00000477069 C16orf71Q8IYS4 520 aaPredicted RBP14.32□□□□□ -0.12
NUP188-205ENST00000477069 C5P01031 1676 aa14.31□□□□□ -0.12
NUP188-205ENST00000477069 DEKP35659 375 aaKnown RBP14.31□□□□□ -0.12
NUP188-205ENST00000477069 MPRIPQ6WCQ1 1025 aa14.31□□□□□ -0.12
NUP188-205ENST00000477069 HMMRO75330 724 aa14.31□□□□□ -0.12
NUP188-205ENST00000477069 OTUD7AQ8TE49 926 aaPredicted RBP14.31□□□□□ -0.12
NUP188-205ENST00000477069 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
NUP188-205ENST00000477069 PLEKHG2Q9H7P9 1386 aa14.3□□□□□ -0.12
NUP188-205ENST00000477069 GNAI3P08754 354 aa14.3□□□□□ -0.12
NUP188-205ENST00000477069 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
NUP188-205ENST00000477069 CDC45O75419 566 aa14.3□□□□□ -0.12
NUP188-205ENST00000477069 DDX17Q92841 729 aaKnown RBP14.3□□□□□ -0.12
NUP188-205ENST00000477069 TEFQ10587 303 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 KIF2CQ99661 725 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 MEGF6O75095 1541 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
NUP188-205ENST00000477069 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 NPHP3Q7Z494 1330 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 SALL3Q9BXA9 1300 aa14.29□□□□□ -0.12
NUP188-205ENST00000477069 PARP4Q9UKK3 1724 aaKnown RBP14.29□□□□□ -0.12
NUP188-205ENST00000477069 MRC1P22897 1456 aa14.28□□□□□ -0.12
NUP188-205ENST00000477069 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
NUP188-205ENST00000477069 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
NUP188-205ENST00000477069 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
NUP188-205ENST00000477069 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
NUP188-205ENST00000477069 OSBPL3Q9H4L5 887 aa14.28□□□□□ -0.12
NUP188-205ENST00000477069 CHPF2Q9P2E5 772 aa14.28□□□□□ -0.12
NUP188-205ENST00000477069 ABCA3Q99758 1704 aa14.28□□□□□ -0.12
NUP188-205ENST00000477069 ADCY9O60503 1353 aa14.27□□□□□ -0.12
NUP188-205ENST00000477069 PNMA6EA0A0J9YXQ4 647 aa14.27□□□□□ -0.12
NUP188-205ENST00000477069 CPDO75976 1380 aa14.27□□□□□ -0.13
NUP188-205ENST00000477069 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.13
NUP188-205ENST00000477069 SNX21Q969T3 373 aa14.27□□□□□ -0.13
NUP188-205ENST00000477069 SPATA31A3Q5VYP0 1347 aa14.27□□□□□ -0.13
NUP188-205ENST00000477069 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
NUP188-205ENST00000477069 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
NUP188-205ENST00000477069 HSPA2P54652 639 aa14.26□□□□□ -0.13
NUP188-205ENST00000477069 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
NUP188-205ENST00000477069 EIF2S2P20042 333 aaKnown RBP14.25□□□□□ -0.13
NUP188-205ENST00000477069 GLI3P10071 1580 aa14.25□□□□□ -0.13
NUP188-205ENST00000477069 BEND3Q5T5X7 828 aa14.25□□□□□ -0.13
NUP188-205ENST00000477069 FRAT2O75474 233 aaPredicted RBP14.25□□□□□ -0.13
NUP188-205ENST00000477069 SDSP20132 328 aa14.25□□□□□ -0.13
NUP188-205ENST00000477069 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
NUP188-205ENST00000477069 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
NUP188-205ENST00000477069 SSH3Q8TE77 659 aa14.24□□□□□ -0.13
NUP188-205ENST00000477069 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
NUP188-205ENST00000477069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.24□□□□□ -0.139e-6■□□□□ 9.4
NUP188-205ENST00000477069 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
NUP188-205ENST00000477069 APBB1O00213 710 aa14.23□□□□□ -0.13
NUP188-205ENST00000477069 PDE1AP54750 535 aa14.23□□□□□ -0.13
NUP188-205ENST00000477069 DNAAF4Q8WXU2 420 aa14.23□□□□□ -0.13
NUP188-205ENST00000477069 DBF4Q9UBU7 674 aaPredicted RBP14.23□□□□□ -0.13
NUP188-205ENST00000477069 UBTFL1P0CB47 393 aaPredicted RBP14.23□□□□□ -0.13
NUP188-205ENST00000477069 POLA2Q14181 598 aa14.23□□□□□ -0.13
NUP188-205ENST00000477069 CABLES1Q8TDN4 633 aa14.23□□□□□ -0.13
NUP188-205ENST00000477069 LAMB4A4D0S4 1761 aa14.22□□□□□ -0.13
NUP188-205ENST00000477069 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
NUP188-205ENST00000477069 EIF5BO60841 1220 aaKnown RBP14.22□□□□□ -0.13
NUP188-205ENST00000477069 PHKG2P15735 406 aa14.22□□□□□ -0.13
NUP188-205ENST00000477069 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms