RNA–Protein interactions for RNA: ENST00000476798.1

SCML4-210, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 2

Gene SCML4, Length 2,679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-210ENST00000476798 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.15
SCML4-210ENST00000476798 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
SCML4-210ENST00000476798 AEBP2Q6ZN18 517 aaPredicted RBP14.08□□□□□ -0.16
SCML4-210ENST00000476798 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
SCML4-210ENST00000476798 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
SCML4-210ENST00000476798 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
SCML4-210ENST00000476798 RGPD8O14715 1765 aaPredicted RBP14.08□□□□□ -0.16
SCML4-210ENST00000476798 WDR63Q8IWG1 891 aa14.08□□□□□ -0.16
SCML4-210ENST00000476798 COG3Q96JB2 828 aa14.08□□□□□ -0.16
SCML4-210ENST00000476798 USP31Q70CQ4 1352 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 LRRC7Q96NW7 1537 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 CHD1LQ86WJ1 897 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 SPTLC3Q9NUV7 552 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 DDX19BQ9UMR2 479 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 PHF8Q9UPP1 1060 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 TMEM94Q12767 1356 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 KIF1AQ12756 1690 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 TRIM27P14373 513 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
SCML4-210ENST00000476798 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
SCML4-210ENST00000476798 KCNJ4P48050 445 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 TTC12Q9H892 705 aaPredicted RBP14.06□□□□□ -0.16
SCML4-210ENST00000476798 ZDHHC9Q9Y397 364 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 SHPRHQ149N8 1683 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 MTHFSP49914 203 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 FEZ1Q99689 392 aa14.06□□□□□ -0.16
SCML4-210ENST00000476798 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
SCML4-210ENST00000476798 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
SCML4-210ENST00000476798 NUTM2FA1L443 756 aa14.05□□□□□ -0.16
SCML4-210ENST00000476798 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
SCML4-210ENST00000476798 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
SCML4-210ENST00000476798 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
SCML4-210ENST00000476798 RIOK3O14730 519 aaKnown RBP14.05□□□□□ -0.16
SCML4-210ENST00000476798 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
SCML4-210ENST00000476798 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
SCML4-210ENST00000476798 NME9Q86XW9 330 aa14.04□□□□□ -0.16
SCML4-210ENST00000476798 ATF3P18847 181 aa14.04□□□□□ -0.16
SCML4-210ENST00000476798 RABEP1Q15276 862 aa14.04□□□□□ -0.16
SCML4-210ENST00000476798 ZGPATQ8N5A5 531 aaKnown RBP14.04□□□□□ -0.16
SCML4-210ENST00000476798 C1orf167Q5SNV9 1468 aa14.03□□□□□ -0.16
SCML4-210ENST00000476798 MSH6P52701 1360 aa14.03□□□□□ -0.16
SCML4-210ENST00000476798 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
SCML4-210ENST00000476798 MBD3O95983 291 aa14.03□□□□□ -0.16
SCML4-210ENST00000476798 CWC22Q9HCG8 908 aaKnown RBP14.03□□□□□ -0.16
SCML4-210ENST00000476798 ZBTB40Q9NUA8 1239 aa14.03□□□□□ -0.16
SCML4-210ENST00000476798 SLFN14P0C7P3 912 aa14.02□□□□□ -0.16
SCML4-210ENST00000476798 CTIFO43310 598 aaKnown RBP14.02□□□□□ -0.17
SCML4-210ENST00000476798 MST1RQ04912 1400 aa14.02□□□□□ -0.17
SCML4-210ENST00000476798 TMEM57Q8N5G2 664 aa14.02□□□□□ -0.17
SCML4-210ENST00000476798 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.17
SCML4-210ENST00000476798 CDK12Q9NYV4 1490 aaPredicted RBP14.02□□□□□ -0.17
SCML4-210ENST00000476798 DIAPH3Q9NSV4 1193 aa14.01□□□□□ -0.17
SCML4-210ENST00000476798 SLC20A2Q08357 652 aa14.01□□□□□ -0.17
SCML4-210ENST00000476798 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
SCML4-210ENST00000476798 ATF7IPQ6VMQ6 1270 aa14.01□□□□□ -0.17
SCML4-210ENST00000476798 USP25Q9UHP3 1055 aa14.01□□□□□ -0.17
SCML4-210ENST00000476798 CCDC27Q2M243 656 aa14□□□□□ -0.17
SCML4-210ENST00000476798 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
SCML4-210ENST00000476798 POLKQ9UBT6 870 aa14□□□□□ -0.17
SCML4-210ENST00000476798 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 ANKRD45Q5TZF3 282 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 XIRP1Q702N8 1843 aaKnown RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 CDC45O75419 566 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 ADCY5O95622 1261 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 NCBP1Q09161 790 aaKnown RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 SSH1Q8WYL5 1049 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 TSR2Q969E8 191 aaKnown RBP13.99□□□□□ -0.17
SCML4-210ENST00000476798 CTNNA3Q9UI47 895 aa13.99□□□□□ -0.17
SCML4-210ENST00000476798 CCDC66A2RUB6 948 aa13.98□□□□□ -0.17
SCML4-210ENST00000476798 PSME1Q06323 249 aa13.98□□□□□ -0.17
SCML4-210ENST00000476798 NOB1Q9ULX3 412 aaKnown RBP13.98□□□□□ -0.17
SCML4-210ENST00000476798 MAP2P11137 1827 aaKnown RBP13.98□□□□□ -0.17
SCML4-210ENST00000476798 UVSSAQ2YD98 709 aa13.98□□□□□ -0.17
SCML4-210ENST00000476798 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
SCML4-210ENST00000476798 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
SCML4-210ENST00000476798 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
SCML4-210ENST00000476798 CT47B1P0C2W7 299 aaPredicted RBP13.97□□□□□ -0.17
SCML4-210ENST00000476798 EXOSC9Q06265 439 aaKnown RBP13.97□□□□□ -0.17
SCML4-210ENST00000476798 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
SCML4-210ENST00000476798 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
SCML4-210ENST00000476798 DDX41Q9UJV9 622 aaKnown RBP13.97□□□□□ -0.17
SCML4-210ENST00000476798 SYAP1Q96A49 352 aaPredicted RBP13.96□□□□□ -0.17
SCML4-210ENST00000476798 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
SCML4-210ENST00000476798 PYCARDQ9ULZ3 195 aa13.96□□□□□ -0.17
SCML4-210ENST00000476798 CAPN2P17655 700 aa13.96□□□□□ -0.18
SCML4-210ENST00000476798 TERF2Q15554 542 aa13.96□□□□□ -0.18
SCML4-210ENST00000476798 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.18
SCML4-210ENST00000476798 ORAI2Q96SN7 254 aa13.95□□□□□ -0.18
SCML4-210ENST00000476798 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
SCML4-210ENST00000476798 KCNF1Q9H3M0 494 aa13.95□□□□□ -0.18
SCML4-210ENST00000476798 SBNO1A3KN83 1393 aa13.94□□□□□ -0.18
SCML4-210ENST00000476798 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms