RNA–Protein interactions for RNA: ENST00000476461.1

PSMD2-213, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 3

Gene PSMD2, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-213ENST00000476461 NEFMP07197 916 aa25.83■■□□□ 1.73
PSMD2-213ENST00000476461 SLC27A3Q5K4L6 730 aa25.83■■□□□ 1.73
PSMD2-213ENST00000476461 SMARCC1Q92922 1105 aaPredicted RBP25.83■■□□□ 1.73
PSMD2-213ENST00000476461 ANO8Q9HCE9 1232 aaPredicted RBP25.83■■□□□ 1.73
PSMD2-213ENST00000476461 MAPK8IP3Q9UPT6 1336 aa25.82■■□□□ 1.72
PSMD2-213ENST00000476461 CCDC146Q8IYE0 955 aa25.81■■□□□ 1.72
PSMD2-213ENST00000476461 MRS2Q9HD23 443 aa25.81■■□□□ 1.72
PSMD2-213ENST00000476461 SIPA1L3O60292 1781 aaPredicted RBP25.81■■□□□ 1.72
PSMD2-213ENST00000476461 CEMIPQ8WUJ3 1361 aa25.81■■□□□ 1.72
PSMD2-213ENST00000476461 CCNL1Q9UK58 526 aaPredicted RBP25.8■■□□□ 1.72
PSMD2-213ENST00000476461 NFE2L2Q16236 605 aa25.79■■□□□ 1.72
PSMD2-213ENST00000476461 NBPF14Q5TI25 921 aa25.79■■□□□ 1.72
PSMD2-213ENST00000476461 C5P01031 1676 aa25.77■■□□□ 1.72
PSMD2-213ENST00000476461 TAF1LQ8IZX4 1826 aa25.77■■□□□ 1.72
PSMD2-213ENST00000476461 DCTN1Q14203 1278 aa25.77■■□□□ 1.72
PSMD2-213ENST00000476461 MCM10Q7L590 875 aa25.77■■□□□ 1.72
PSMD2-213ENST00000476461 PNISRQ8TF01 805 aaKnown RBP25.77■■□□□ 1.72
PSMD2-213ENST00000476461 RUNDC1Q96C34 613 aa25.77■■□□□ 1.72
PSMD2-213ENST00000476461 LOC102724428A0A0B4J2F2 783 aa25.76■■□□□ 1.71
PSMD2-213ENST00000476461 HTATSF1O43719 755 aaKnown RBP25.76■■□□□ 1.71
PSMD2-213ENST00000476461 SIK1P57059 783 aa25.76■■□□□ 1.71
PSMD2-213ENST00000476461 RTF1Q92541 710 aaKnown RBP25.76■■□□□ 1.71
PSMD2-213ENST00000476461 TEFQ10587 303 aa25.74■■□□□ 1.71
PSMD2-213ENST00000476461 ZNF827Q17R98 1081 aa25.74■■□□□ 1.71
PSMD2-213ENST00000476461 SLC4A9Q96Q91 983 aa25.74■■□□□ 1.71
PSMD2-213ENST00000476461 ZNF831Q5JPB2 1677 aa25.74■■□□□ 1.71
PSMD2-213ENST00000476461 TMPOP42166 694 aaKnown RBP25.73■■□□□ 1.71
PSMD2-213ENST00000476461 SLC39A6Q13433 755 aa25.73■■□□□ 1.71
PSMD2-213ENST00000476461 SLC15A2Q16348 729 aa25.72■■□□□ 1.71
PSMD2-213ENST00000476461 AKT1S1Q96B36 256 aa25.72■■□□□ 1.71
PSMD2-213ENST00000476461 RBM42Q9BTD8 480 aaKnown RBP25.72■■□□□ 1.71
PSMD2-213ENST00000476461 STK32BQ9NY57 414 aa25.72■■□□□ 1.71
PSMD2-213ENST00000476461 RRP7AQ9Y3A4 280 aaKnown RBP25.72■■□□□ 1.71
PSMD2-213ENST00000476461 PTCD1O75127 700 aaKnown RBP25.71■■□□□ 1.71
PSMD2-213ENST00000476461 RIPK4P57078 832 aa25.71■■□□□ 1.71
PSMD2-213ENST00000476461 ITPK1Q13572 414 aa25.71■■□□□ 1.71
PSMD2-213ENST00000476461 KCPQ6ZWJ8 1503 aa25.71■■□□□ 1.71
PSMD2-213ENST00000476461 UBR2Q8IWV8 1755 aa25.71■■□□□ 1.71
PSMD2-213ENST00000476461 TUBGCP6Q96RT7 1819 aa25.7■■□□□ 1.71
PSMD2-213ENST00000476461 ATP6V1AP38606 617 aa25.7■■□□□ 1.7
PSMD2-213ENST00000476461 C4BP0C0L5 1744 aa25.7■■□□□ 1.7
PSMD2-213ENST00000476461 DIEXFQ68CQ4 756 aaKnown RBP25.69■■□□□ 1.7
PSMD2-213ENST00000476461 THUMPD2Q9BTF0 503 aaKnown RBP25.69■■□□□ 1.7
PSMD2-213ENST00000476461 TJP1Q07157 1748 aa25.68■■□□□ 1.7
PSMD2-213ENST00000476461 CICQ96RK0 1608 aaPredicted RBP25.68■■□□□ 1.7
PSMD2-213ENST00000476461 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
PSMD2-213ENST00000476461 LINC00116Q8NCU8 138 aa25.68■■□□□ 1.7
PSMD2-213ENST00000476461 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
PSMD2-213ENST00000476461 CASZ1Q86V15 1759 aa25.67■■□□□ 1.7
PSMD2-213ENST00000476461 QSER1Q2KHR3 1735 aa25.66■■□□□ 1.7
PSMD2-213ENST00000476461 PDGFDQ9GZP0 370 aaPredicted RBP25.66■■□□□ 1.7
PSMD2-213ENST00000476461 BTBD11A6QL63 1104 aa25.65■■□□□ 1.7
PSMD2-213ENST00000476461 APAF1O14727 1248 aa25.65■■□□□ 1.7
PSMD2-213ENST00000476461 ZNF790Q6PG37 636 aa25.65■■□□□ 1.7
PSMD2-213ENST00000476461 KCNQ3O43525 872 aa25.64■■□□□ 1.7
PSMD2-213ENST00000476461 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.7
PSMD2-213ENST00000476461 LMOD3Q0VAK6 560 aa25.63■■□□□ 1.69
PSMD2-213ENST00000476461 TAF7Q15545 349 aaPredicted RBP25.63■■□□□ 1.69
PSMD2-213ENST00000476461 TTC5Q8N0Z6 440 aa25.63■■□□□ 1.69
PSMD2-213ENST00000476461 ZNF496Q96IT1 587 aaPredicted RBP25.62■■□□□ 1.69
PSMD2-213ENST00000476461 TFCP2L1Q9NZI6 479 aa25.62■■□□□ 1.69
PSMD2-213ENST00000476461 UBR3Q6ZT12 1888 aa25.62■■□□□ 1.69
PSMD2-213ENST00000476461 KDM3BQ7LBC6 1761 aa25.61■■□□□ 1.69
PSMD2-213ENST00000476461 HMGB2P26583 209 aaKnown RBP25.61■■□□□ 1.69
PSMD2-213ENST00000476461 MIS18AQ9NYP9 233 aa25.61■■□□□ 1.69
PSMD2-213ENST00000476461 PNPLA7Q6ZV29 1317 aa25.61■■□□□ 1.69
PSMD2-213ENST00000476461 YY1P25490 414 aa25.6■■□□□ 1.69
PSMD2-213ENST00000476461 AMIGO3Q86WK7 504 aa25.6■■□□□ 1.69
PSMD2-213ENST00000476461 FAM9BQ8IZU0 186 aa25.6■■□□□ 1.69
PSMD2-213ENST00000476461 MYH14Q7Z406 1995 aaKnown RBP25.6■■□□□ 1.69
PSMD2-213ENST00000476461 DNAJC10Q8IXB1 793 aa25.59■■□□□ 1.69
PSMD2-213ENST00000476461 AK7Q96M32 723 aa25.59■■□□□ 1.69
PSMD2-213ENST00000476461 VSIG10Q8N0Z9 540 aa25.58■■□□□ 1.69
PSMD2-213ENST00000476461 HEG1Q9ULI3 1381 aa25.57■■□□□ 1.68
PSMD2-213ENST00000476461 SENP3-EIF4A1A0A087X0R7 540 aa25.57■■□□□ 1.68
PSMD2-213ENST00000476461 CCER2I3L3R5 266 aa25.57■■□□□ 1.68
PSMD2-213ENST00000476461 SMIM5Q71RC9 77 aa25.57■■□□□ 1.68
PSMD2-213ENST00000476461 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
PSMD2-213ENST00000476461 FMNL2Q96PY5 1086 aa25.56■■□□□ 1.68
PSMD2-213ENST00000476461 GNPATO15228 680 aa25.55■■□□□ 1.68
PSMD2-213ENST00000476461 CRKLP46109 303 aaKnown RBP25.55■■□□□ 1.68
PSMD2-213ENST00000476461 RC3H1Q5TC82 1133 aaKnown RBP25.55■■□□□ 1.68
PSMD2-213ENST00000476461 COL23A1Q86Y22 540 aaPredicted RBP25.55■■□□□ 1.68
PSMD2-213ENST00000476461 MIER1Q8N108 512 aa25.55■■□□□ 1.68
PSMD2-213ENST00000476461 CYP19A1P11511 503 aaPredicted RBP25.54■■□□□ 1.68
PSMD2-213ENST00000476461 PHF14O94880 888 aa25.52■■□□□ 1.68
PSMD2-213ENST00000476461 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
PSMD2-213ENST00000476461 INTS5Q6P9B9 1019 aaKnown RBP25.52■■□□□ 1.68
PSMD2-213ENST00000476461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.51■■□□□ 1.67
PSMD2-213ENST00000476461 SSFA2P28290 1259 aa25.51■■□□□ 1.67
PSMD2-213ENST00000476461 PRAMEF22A3QJZ6 481 aa25.5■■□□□ 1.67
PSMD2-213ENST00000476461 CCDC87Q9NVE4 849 aa25.5■■□□□ 1.67
PSMD2-213ENST00000476461 TSPYL4Q9UJ04 414 aa25.5■■□□□ 1.67
PSMD2-213ENST00000476461 RPS6KA4O75676 772 aa25.49■■□□□ 1.67
PSMD2-213ENST00000476461 EIF4A1P60842 406 aaKnown RBP25.49■■□□□ 1.67
PSMD2-213ENST00000476461 FLAD1Q8NFF5 587 aa25.49■■□□□ 1.67
PSMD2-213ENST00000476461 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
PSMD2-213ENST00000476461 PPP1R1BQ9UD71 204 aaPredicted RBP25.49■■□□□ 1.67
PSMD2-213ENST00000476461 RTCBQ9Y3I0 505 aaKnown RBP25.49■■□□□ 1.67
PSMD2-213ENST00000476461 CHL1O00533 1208 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms