RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NUTM2GQ5VZR2 741 aa8.74□□□□□ -1.01
UBR4-212ENST00000475973 MORC1Q86VD1 984 aa8.74□□□□□ -1.01
UBR4-212ENST00000475973 SMC5Q8IY18 1101 aa8.74□□□□□ -1.01
UBR4-212ENST00000475973 FRAT1Q92837 279 aaPredicted RBP8.74□□□□□ -1.01
UBR4-212ENST00000475973 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
UBR4-212ENST00000475973 SPATA31A5Q5VU36 1347 aa8.74□□□□□ -1.01
UBR4-212ENST00000475973 SPATA31A7Q8IWB4 1347 aa8.74□□□□□ -1.01
UBR4-212ENST00000475973 CPDO75976 1380 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 RGPD8O14715 1765 aaPredicted RBP8.73□□□□□ -1.01
UBR4-212ENST00000475973 USP6P35125 1406 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 DDIT3P35638 169 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 BAG6P46379 1132 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 MTHFSP49914 203 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 EVA1CP58658 441 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 ZC3H6P61129 1189 aaKnown RBP8.73□□□□□ -1.01
UBR4-212ENST00000475973 MVPQ14764 893 aaKnown RBP8.73□□□□□ -1.01
UBR4-212ENST00000475973 CHRNA2Q15822 529 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 IL27Q8NEV9 243 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 PANK1Q8TE04 598 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 NRAPQ86VF7 1730 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 NRKQ7Z2Y5 1582 aa8.73□□□□□ -1.01
UBR4-212ENST00000475973 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
UBR4-212ENST00000475973 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 MKRN3Q13064 507 aaKnown RBP8.72□□□□□ -1.01
UBR4-212ENST00000475973 MFSD10Q14728 455 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
UBR4-212ENST00000475973 MYH16Q9H6N6 1097 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 PDZRN3Q9UPQ7 1066 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 SPATA31A1Q5TZJ5 1347 aa8.72□□□□□ -1.01
UBR4-212ENST00000475973 PHRF1Q9P1Y6 1649 aaKnown RBP8.72□□□□□ -1.01
UBR4-212ENST00000475973 SSH2Q76I76 1423 aa8.71□□□□□ -1.01
UBR4-212ENST00000475973 ZNF428Q96B54 188 aa8.71□□□□□ -1.02
UBR4-212ENST00000475973 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
UBR4-212ENST00000475973 RWDD1Q9H446 243 aaPredicted RBP8.71□□□□□ -1.02
UBR4-212ENST00000475973 FSD2A1L4K1 749 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 ZBTB7CA1YPR0 619 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 TULP1O00294 542 aaPredicted RBP8.7□□□□□ -1.02
UBR4-212ENST00000475973 GCP02774 474 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 TIE1P35590 1138 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 RGS3P49796 1198 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 BARGINQ6ZT62 677 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 CFAP53Q96M91 514 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 TNNQ9UQP3 1299 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 CRYBG1Q9Y4K1 1723 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 TTC21AQ8NDW8 1320 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 A0A1W2PP64 1363 aa8.7□□□□□ -1.02
UBR4-212ENST00000475973 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
UBR4-212ENST00000475973 BECN1Q14457 450 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 ALDH1L2Q3SY69 923 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 ZKSCAN2Q63HK3 967 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 DEFB132Q7Z7B7 95 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 KCNH5Q8NCM2 988 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 ZBTB40Q9NUA8 1239 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 THRAP3Q9Y2W1 955 aaKnown RBP8.69□□□□□ -1.02
UBR4-212ENST00000475973 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
UBR4-212ENST00000475973 SLIT3O75094 1523 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 EP400Q96L91 3159 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
UBR4-212ENST00000475973 TESPA1A2RU30 521 aaPredicted RBP8.68□□□□□ -1.02
UBR4-212ENST00000475973 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 SEMA3EO15041 775 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 FYB1O15117 783 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 RBM25P49756 843 aaKnown RBP8.68□□□□□ -1.02
UBR4-212ENST00000475973 LARP1Q6PKG0 1096 aaKnown RBP8.68□□□□□ -1.02
UBR4-212ENST00000475973 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 DZIP1LQ8IYY4 767 aaKnown RBP8.68□□□□□ -1.02
UBR4-212ENST00000475973 FAM43AQ8N2R8 423 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 SNX21Q969T3 373 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
UBR4-212ENST00000475973 AATKQ6ZMQ8 1374 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 CRB1P82279 1406 aa8.68□□□□□ -1.02
UBR4-212ENST00000475973 DISP2A7MBM2 1401 aa8.67□□□□□ -1.02
UBR4-212ENST00000475973 CPSF1Q10570 1443 aaKnown RBP8.67□□□□□ -1.02
UBR4-212ENST00000475973 KIF24Q5T7B8 1368 aa8.67□□□□□ -1.02
UBR4-212ENST00000475973 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
UBR4-212ENST00000475973 HDGFL2Q7Z4V5 671 aaPredicted RBP8.67□□□□□ -1.02
UBR4-212ENST00000475973 ARHGAP45Q92619 1136 aa8.67□□□□□ -1.02
UBR4-212ENST00000475973 DDX27Q96GQ7 796 aaKnown RBP8.67□□□□□ -1.02
UBR4-212ENST00000475973 LMO7Q8WWI1 1683 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 CAMTA1Q9Y6Y1 1673 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 FCHSD2O94868 740 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 TRIM27P14373 513 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 ATF7IPQ6VMQ6 1270 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 SSH1Q8WYL5 1049 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 BRPF3Q9ULD4 1205 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 DDX19BQ9UMR2 479 aa8.66□□□□□ -1.02
UBR4-212ENST00000475973 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 NUCB1Q02818 461 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 CAMK2BQ13554 666 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 CLEC17AQ6ZS10 378 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 TOM1L2Q6ZVM7 507 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
UBR4-212ENST00000475973 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms