RNA–Protein interactions for RNA: ENST00000475730.5

TNFRSF25-212, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 3

Gene TNFRSF25, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-212ENST00000475730 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
TNFRSF25-212ENST00000475730 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
TNFRSF25-212ENST00000475730 MRC1P22897 1456 aa17.42■□□□□ 0.38
TNFRSF25-212ENST00000475730 GNAT3A8MTJ3 354 aa17.41■□□□□ 0.38
TNFRSF25-212ENST00000475730 NFATC2IPQ8NCF5 419 aa17.41■□□□□ 0.38
TNFRSF25-212ENST00000475730 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
TNFRSF25-212ENST00000475730 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
TNFRSF25-212ENST00000475730 ADAMTS7Q9UKP4 1686 aa17.41■□□□□ 0.38
TNFRSF25-212ENST00000475730 PNPLA7Q6ZV29 1317 aa17.41■□□□□ 0.38
TNFRSF25-212ENST00000475730 C5P01031 1676 aa17.4■□□□□ 0.38
TNFRSF25-212ENST00000475730 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
TNFRSF25-212ENST00000475730 NEFMP07197 916 aa17.4■□□□□ 0.38
TNFRSF25-212ENST00000475730 PTGER2P43116 358 aa17.4■□□□□ 0.38
TNFRSF25-212ENST00000475730 SIK1P57059 783 aa17.4■□□□□ 0.38
TNFRSF25-212ENST00000475730 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
TNFRSF25-212ENST00000475730 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
TNFRSF25-212ENST00000475730 MSH5O43196 834 aa17.37■□□□□ 0.37
TNFRSF25-212ENST00000475730 ATP6V1AP38606 617 aa17.37■□□□□ 0.37
TNFRSF25-212ENST00000475730 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
TNFRSF25-212ENST00000475730 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF25-212ENST00000475730 SLC16A10Q8TF71 515 aa17.36■□□□□ 0.37
TNFRSF25-212ENST00000475730 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
TNFRSF25-212ENST00000475730 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 TEFQ10587 303 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 ITPK1Q13572 414 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 PLEKHF1Q96S99 279 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 SGIP1Q9BQI5 828 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
TNFRSF25-212ENST00000475730 ZNF831Q5JPB2 1677 aa17.34■□□□□ 0.37
TNFRSF25-212ENST00000475730 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
TNFRSF25-212ENST00000475730 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
TNFRSF25-212ENST00000475730 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
TNFRSF25-212ENST00000475730 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
TNFRSF25-212ENST00000475730 AK7Q96M32 723 aa17.34■□□□□ 0.37
TNFRSF25-212ENST00000475730 ANP32CO43423 234 aa17.33■□□□□ 0.36
TNFRSF25-212ENST00000475730 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.36
TNFRSF25-212ENST00000475730 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
TNFRSF25-212ENST00000475730 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.36
TNFRSF25-212ENST00000475730 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
TNFRSF25-212ENST00000475730 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
TNFRSF25-212ENST00000475730 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
TNFRSF25-212ENST00000475730 ARXQ96QS3 562 aa17.32■□□□□ 0.36
TNFRSF25-212ENST00000475730 PHF14O94880 888 aa17.31■□□□□ 0.36
TNFRSF25-212ENST00000475730 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
TNFRSF25-212ENST00000475730 MCM10Q7L590 875 aa17.31■□□□□ 0.36
TNFRSF25-212ENST00000475730 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
TNFRSF25-212ENST00000475730 FHDC1Q9C0D6 1143 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF25-212ENST00000475730 POLD1P28340 1107 aa17.3■□□□□ 0.36
TNFRSF25-212ENST00000475730 MSL1Q68DK7 614 aa17.3■□□□□ 0.36
TNFRSF25-212ENST00000475730 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
TNFRSF25-212ENST00000475730 KCPQ6ZWJ8 1503 aa17.3■□□□□ 0.36
TNFRSF25-212ENST00000475730 CICQ96RK0 1608 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF25-212ENST00000475730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
TNFRSF25-212ENST00000475730 GNPATO15228 680 aa17.29■□□□□ 0.36
TNFRSF25-212ENST00000475730 SYT17Q9BSW7 474 aa17.29■□□□□ 0.36
TNFRSF25-212ENST00000475730 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF25-212ENST00000475730 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF25-212ENST00000475730 TJP1Q07157 1748 aa17.28■□□□□ 0.36
TNFRSF25-212ENST00000475730 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
TNFRSF25-212ENST00000475730 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
TNFRSF25-212ENST00000475730 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
TNFRSF25-212ENST00000475730 CNTNAP4Q9C0A0 1308 aa17.27■□□□□ 0.36
TNFRSF25-212ENST00000475730 BTBD11A6QL63 1104 aa17.27■□□□□ 0.36
TNFRSF25-212ENST00000475730 SSFA2P28290 1259 aa17.27■□□□□ 0.36
TNFRSF25-212ENST00000475730 ZNF790Q6PG37 636 aa17.27■□□□□ 0.36
TNFRSF25-212ENST00000475730 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
TNFRSF25-212ENST00000475730 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
TNFRSF25-212ENST00000475730 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
TNFRSF25-212ENST00000475730 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
TNFRSF25-212ENST00000475730 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
TNFRSF25-212ENST00000475730 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
TNFRSF25-212ENST00000475730 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
TNFRSF25-212ENST00000475730 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
TNFRSF25-212ENST00000475730 DLG5Q8TDM6 1919 aa17.24■□□□□ 0.35
TNFRSF25-212ENST00000475730 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
TNFRSF25-212ENST00000475730 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
TNFRSF25-212ENST00000475730 CRKLP46109 303 aaKnown RBP17.24■□□□□ 0.35
TNFRSF25-212ENST00000475730 RIPK4P57078 832 aa17.24■□□□□ 0.35
TNFRSF25-212ENST00000475730 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 TRAPPC3LQ5T215 181 aa17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
TNFRSF25-212ENST00000475730 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
TNFRSF25-212ENST00000475730 ADRA2BP18089 450 aa17.22■□□□□ 0.35
TNFRSF25-212ENST00000475730 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
TNFRSF25-212ENST00000475730 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
TNFRSF25-212ENST00000475730 KCNQ3O43525 872 aa17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 CCDC87Q9NVE4 849 aa17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 RRP7AQ9Y3A4 280 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms