RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
U2AF1-209ENST00000475639 CEP152O94986 1710 aa13.6□□□□□ -0.23
U2AF1-209ENST00000475639 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
U2AF1-209ENST00000475639 CAPN2P17655 700 aa13.6□□□□□ -0.23
U2AF1-209ENST00000475639 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
U2AF1-209ENST00000475639 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
U2AF1-209ENST00000475639 TERF2Q15554 542 aa13.59□□□□□ -0.23
U2AF1-209ENST00000475639 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
U2AF1-209ENST00000475639 API5Q9BZZ5 524 aaKnown RBP13.59□□□□□ -0.23
U2AF1-209ENST00000475639 CDC45O75419 566 aa13.59□□□□□ -0.23
U2AF1-209ENST00000475639 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
U2AF1-209ENST00000475639 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
U2AF1-209ENST00000475639 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.23
U2AF1-209ENST00000475639 PYCARDQ9ULZ3 195 aa13.58□□□□□ -0.23
U2AF1-209ENST00000475639 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
U2AF1-209ENST00000475639 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
U2AF1-209ENST00000475639 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
U2AF1-209ENST00000475639 WWC2Q6AWC2 1192 aa13.58□□□□□ -0.24
U2AF1-209ENST00000475639 KCNF1Q9H3M0 494 aa13.58□□□□□ -0.24
U2AF1-209ENST00000475639 ZNHIT6Q9NWK9 470 aaKnown RBP13.58□□□□□ -0.24
U2AF1-209ENST00000475639 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
U2AF1-209ENST00000475639 TULP2O00295 520 aa13.58□□□□□ -0.24
U2AF1-209ENST00000475639 UVSSAQ2YD98 709 aa13.58□□□□□ -0.24
U2AF1-209ENST00000475639 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
U2AF1-209ENST00000475639 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
U2AF1-209ENST00000475639 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
U2AF1-209ENST00000475639 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
U2AF1-209ENST00000475639 DEF6Q9H4E7 631 aa13.57□□□□□ -0.24
U2AF1-209ENST00000475639 GSPT1P15170 499 aaKnown RBP13.57□□□□□ -0.24
U2AF1-209ENST00000475639 INTS3Q68E01 1043 aaKnown RBP13.57□□□□□ -0.24
U2AF1-209ENST00000475639 SCAF11Q99590 1463 aaKnown RBP13.57□□□□□ -0.24
U2AF1-209ENST00000475639 ENOX2Q16206 610 aaKnown RBP13.57□□□□□ -0.24
U2AF1-209ENST00000475639 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
U2AF1-209ENST00000475639 NOS1P29475 1434 aa13.57□□□□□ -0.24
U2AF1-209ENST00000475639 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
U2AF1-209ENST00000475639 MADDQ8WXG6 1647 aa13.56□□□□□ -0.24
U2AF1-209ENST00000475639 EID1Q9Y6B2 187 aa13.56□□□□□ -0.24
U2AF1-209ENST00000475639 MORC2Q9Y6X9 1032 aaPredicted RBP13.56□□□□□ -0.24
U2AF1-209ENST00000475639 ERC2O15083 957 aa13.56□□□□□ -0.24
U2AF1-209ENST00000475639 ERLIN1O75477 346 aa13.56□□□□□ -0.24
U2AF1-209ENST00000475639 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
U2AF1-209ENST00000475639 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
U2AF1-209ENST00000475639 CCAR1Q8IX12 1150 aaKnown RBP13.55□□□□□ -0.24
U2AF1-209ENST00000475639 PDCP20941 246 aa13.55□□□□□ -0.24
U2AF1-209ENST00000475639 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
U2AF1-209ENST00000475639 MAGEC2Q9UBF1 373 aaPredicted RBP13.55□□□□□ -0.24
U2AF1-209ENST00000475639 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
U2AF1-209ENST00000475639 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.24
U2AF1-209ENST00000475639 NAA30Q147X3 362 aaPredicted RBP13.55□□□□□ -0.24
U2AF1-209ENST00000475639 TAX1BP1Q86VP1 789 aa13.55□□□□□ -0.24
U2AF1-209ENST00000475639 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
U2AF1-209ENST00000475639 GADD45BO75293 160 aaPredicted RBP13.54□□□□□ -0.24
U2AF1-209ENST00000475639 TXLNAP40222 546 aa13.54□□□□□ -0.24
U2AF1-209ENST00000475639 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
U2AF1-209ENST00000475639 ZFP91Q96JP5 570 aaPredicted RBP13.54□□□□□ -0.24
U2AF1-209ENST00000475639 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
U2AF1-209ENST00000475639 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
U2AF1-209ENST00000475639 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
U2AF1-209ENST00000475639 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
U2AF1-209ENST00000475639 KIF18AQ8NI77 898 aa13.54□□□□□ -0.24
U2AF1-209ENST00000475639 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
U2AF1-209ENST00000475639 BRD1O95696 1058 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 ERICH4A6NGS2 130 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.53□□□□□ -0.24
U2AF1-209ENST00000475639 PLB1Q6P1J6 1458 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 SMC2O95347 1197 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 TMEM132AQ24JP5 1023 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
U2AF1-209ENST00000475639 AP5Z1O43299 807 aa13.52□□□□□ -0.24
U2AF1-209ENST00000475639 KDM4AO75164 1064 aa13.52□□□□□ -0.24
U2AF1-209ENST00000475639 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.24
U2AF1-209ENST00000475639 SART3Q15020 963 aaKnown RBP13.52□□□□□ -0.24
U2AF1-209ENST00000475639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
U2AF1-209ENST00000475639 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
U2AF1-209ENST00000475639 CLASRPQ8N2M8 674 aaKnown RBP13.52□□□□□ -0.25
U2AF1-209ENST00000475639 UNC13BO14795 1591 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 REREQ9P2R6 1566 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 SMARCA5O60264 1052 aaPredicted RBP13.51□□□□□ -0.25
U2AF1-209ENST00000475639 CCDC112Q8NEF3 446 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 ATP2B1P20020 1258 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 CALCOCO1Q9P1Z2 691 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 ERVK-7P63135 1459 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 PSMA5P28066 241 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
U2AF1-209ENST00000475639 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
U2AF1-209ENST00000475639 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
U2AF1-209ENST00000475639 ATP10AO60312 1499 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 FOSBP53539 338 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 KRT222Q8N1A0 295 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 PPRC1Q5VV67 1664 aaKnown RBP13.5□□□□□ -0.25
U2AF1-209ENST00000475639 MED14O60244 1454 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 ZNF518AQ6AHZ1 1483 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 TEX2Q8IWB9 1127 aa13.5□□□□□ -0.25
U2AF1-209ENST00000475639 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms