RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
KCNIP3-206ENST00000475491 ARHGEF10O15013 1369 aa14.33□□□□□ -0.12
KCNIP3-206ENST00000475491 ADGRB2O60241 1585 aa14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 RNMTO43148 476 aaKnown RBP14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 C8orf34Q49A92 452 aa14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 FLIIQ13045 1269 aa14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 USP19O94966 1318 aa14.32□□□□□ -0.12
KCNIP3-206ENST00000475491 FMN2Q9NZ56 1722 aa14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 CYP27B1O15528 508 aa14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 MS4A1P11836 297 aa14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 MFAP1P55081 439 aaKnown RBP14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 ANKRD26Q9UPS8 1709 aa14.31□□□□□ -0.12
KCNIP3-206ENST00000475491 STRCP1A6NGW2 1772 aa14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 OTUD7AQ8TE49 926 aaPredicted RBP14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 ZBTB7BO15156 539 aaPredicted RBP14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 PXDNQ92626 1479 aa14.3□□□□□ -0.12
KCNIP3-206ENST00000475491 CABP4P57796 275 aa14.29□□□□□ -0.12
KCNIP3-206ENST00000475491 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
KCNIP3-206ENST00000475491 KCNQ4P56696 695 aa14.29□□□□□ -0.12
KCNIP3-206ENST00000475491 CWF19L2Q2TBE0 894 aaKnown RBP14.29□□□□□ -0.12
KCNIP3-206ENST00000475491 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 SIRT2Q8IXJ6 389 aa14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 CRB1P82279 1406 aa14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 CCDC30Q5VVM6 783 aa14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 ZNF496Q96IT1 587 aaPredicted RBP14.28□□□□□ -0.12
KCNIP3-206ENST00000475491 EIF4A1P60842 406 aaKnown RBP14.27□□□□□ -0.12
KCNIP3-206ENST00000475491 TTC5Q8N0Z6 440 aa14.27□□□□□ -0.12
KCNIP3-206ENST00000475491 DLG5Q8TDM6 1919 aa14.27□□□□□ -0.13
KCNIP3-206ENST00000475491 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.13
KCNIP3-206ENST00000475491 CCDC85AQ96PX6 553 aaPredicted RBP14.27□□□□□ -0.13
KCNIP3-206ENST00000475491 KDRP35968 1356 aa14.27□□□□□ -0.13
KCNIP3-206ENST00000475491 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 NRKQ7Z2Y5 1582 aa14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 FAM177BA6PVY3 158 aa14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 SPG7Q9UQ90 795 aa14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 EP400Q96L91 3159 aa14.26□□□□□ -0.13
KCNIP3-206ENST00000475491 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
KCNIP3-206ENST00000475491 CT47B1P0C2W7 299 aaPredicted RBP14.25□□□□□ -0.13
KCNIP3-206ENST00000475491 PHKG2P15735 406 aa14.25□□□□□ -0.13
KCNIP3-206ENST00000475491 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
KCNIP3-206ENST00000475491 MAP4K4O95819 1239 aaPredicted RBP14.24□□□□□ -0.13
KCNIP3-206ENST00000475491 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
KCNIP3-206ENST00000475491 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
KCNIP3-206ENST00000475491 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
KCNIP3-206ENST00000475491 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
KCNIP3-206ENST00000475491 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
KCNIP3-206ENST00000475491 NBPF7P0C2Y1 421 aaPredicted RBP14.23□□□□□ -0.13
KCNIP3-206ENST00000475491 A1BGP04217 495 aa14.23□□□□□ -0.13
KCNIP3-206ENST00000475491 SIL1Q9H173 461 aa14.23□□□□□ -0.13
KCNIP3-206ENST00000475491 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
KCNIP3-206ENST00000475491 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 ZNF790Q6PG37 636 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 RIC3Q7Z5B4 369 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 KLHDC4Q8TBB5 520 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 MEGF6O75095 1541 aa14.22□□□□□ -0.13
KCNIP3-206ENST00000475491 COPS6Q7L5N1 327 aa14.21□□□□□ -0.13
KCNIP3-206ENST00000475491 UPF2Q9HAU5 1272 aaKnown RBP14.21□□□□□ -0.13
KCNIP3-206ENST00000475491 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
KCNIP3-206ENST00000475491 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
KCNIP3-206ENST00000475491 LTN1O94822 1766 aa14.21□□□□□ -0.13
KCNIP3-206ENST00000475491 GIGYF1O75420 1035 aaPredicted RBP14.21□□□□□ -0.14
KCNIP3-206ENST00000475491 OS9Q13438 667 aaPredicted RBP14.21□□□□□ -0.14
KCNIP3-206ENST00000475491 XAGE3Q8WTP9 111 aa14.21□□□□□ -0.14
KCNIP3-206ENST00000475491 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.14
KCNIP3-206ENST00000475491 IL2RBP14784 551 aa14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 MED1Q15648 1581 aaPredicted RBP14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 NFAT5O94916 1531 aa14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 PA2G4Q9UQ80 394 aaKnown RBP14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 SOS2Q07890 1332 aaPredicted RBP14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 SLC52A2Q9HAB3 445 aa14.2□□□□□ -0.14
KCNIP3-206ENST00000475491 UBTFL1P0CB47 393 aaPredicted RBP14.19□□□□□ -0.14
KCNIP3-206ENST00000475491 NAP1L5Q96NT1 182 aaPredicted RBP14.19□□□□□ -0.14
KCNIP3-206ENST00000475491 RGPD5Q99666 1765 aa14.19□□□□□ -0.14
KCNIP3-206ENST00000475491 UTRNP46939 3433 aa14.19□□□□□ -0.14
KCNIP3-206ENST00000475491 ABCC4O15439 1325 aa14.19□□□□□ -0.14
KCNIP3-206ENST00000475491 MYD88Q99836 296 aa14.19□□□□□ -0.14
KCNIP3-206ENST00000475491 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
KCNIP3-206ENST00000475491 STRCQ7RTU9 1775 aa14.18□□□□□ -0.14
KCNIP3-206ENST00000475491 CEP85Q6P2H3 762 aa14.18□□□□□ -0.14
KCNIP3-206ENST00000475491 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
KCNIP3-206ENST00000475491 SRCIN1Q9C0H9 1055 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms