RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 GNPATO15228 680 aa16.99■□□□□ 0.31
TTC38-206ENST00000475467 PHF14O94880 888 aa16.99■□□□□ 0.31
TTC38-206ENST00000475467 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
TTC38-206ENST00000475467 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
TTC38-206ENST00000475467 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
TTC38-206ENST00000475467 ADCY9O60503 1353 aa16.99■□□□□ 0.31
TTC38-206ENST00000475467 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
TTC38-206ENST00000475467 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
TTC38-206ENST00000475467 EIF4A2Q14240 407 aaKnown RBP16.97■□□□□ 0.31
TTC38-206ENST00000475467 ITPK1Q13572 414 aa16.96■□□□□ 0.31
TTC38-206ENST00000475467 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.3
TTC38-206ENST00000475467 EIF4G2P78344 907 aaKnown RBP eCLIP16.95■□□□□ 0.3
TTC38-206ENST00000475467 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
TTC38-206ENST00000475467 KDRP35968 1356 aa16.94■□□□□ 0.3
TTC38-206ENST00000475467 MMP10P09238 476 aa16.94■□□□□ 0.3
TTC38-206ENST00000475467 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
TTC38-206ENST00000475467 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
TTC38-206ENST00000475467 HSPA6P17066 643 aa16.93■□□□□ 0.3
TTC38-206ENST00000475467 RFC4P35249 363 aa16.93■□□□□ 0.3
TTC38-206ENST00000475467 CABP4P57796 275 aa16.93■□□□□ 0.3
TTC38-206ENST00000475467 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
TTC38-206ENST00000475467 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
TTC38-206ENST00000475467 CICQ96RK0 1608 aaPredicted RBP16.91■□□□□ 0.3
TTC38-206ENST00000475467 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
TTC38-206ENST00000475467 MTHFSP49914 203 aa16.9■□□□□ 0.3
TTC38-206ENST00000475467 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
TTC38-206ENST00000475467 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
TTC38-206ENST00000475467 PANK3Q9H999 370 aa16.9■□□□□ 0.3
TTC38-206ENST00000475467 PARP3Q9Y6F1 533 aa16.9■□□□□ 0.3
TTC38-206ENST00000475467 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
TTC38-206ENST00000475467 POLR3GLQ9BT43 218 aa16.89■□□□□ 0.29
TTC38-206ENST00000475467 GYS1P13807 737 aa16.88■□□□□ 0.29
TTC38-206ENST00000475467 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
TTC38-206ENST00000475467 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
TTC38-206ENST00000475467 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
TTC38-206ENST00000475467 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
TTC38-206ENST00000475467 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
TTC38-206ENST00000475467 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
TTC38-206ENST00000475467 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
TTC38-206ENST00000475467 TOMM70O94826 608 aa16.86■□□□□ 0.29
TTC38-206ENST00000475467 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
TTC38-206ENST00000475467 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
TTC38-206ENST00000475467 KIF3CO14782 793 aa16.85■□□□□ 0.29
TTC38-206ENST00000475467 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
TTC38-206ENST00000475467 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
TTC38-206ENST00000475467 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
TTC38-206ENST00000475467 FCHSD2O94868 740 aa16.84■□□□□ 0.29
TTC38-206ENST00000475467 APLP1P51693 650 aa16.84■□□□□ 0.29
TTC38-206ENST00000475467 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
TTC38-206ENST00000475467 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
TTC38-206ENST00000475467 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
TTC38-206ENST00000475467 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.28
TTC38-206ENST00000475467 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
TTC38-206ENST00000475467 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
TTC38-206ENST00000475467 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
TTC38-206ENST00000475467 ARHGAP27Q6ZUM4 889 aa16.83■□□□□ 0.28
TTC38-206ENST00000475467 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
TTC38-206ENST00000475467 DPEP1P16444 411 aa16.82■□□□□ 0.28
TTC38-206ENST00000475467 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
TTC38-206ENST00000475467 MYH14Q7Z406 1995 aaKnown RBP16.81■□□□□ 0.28
TTC38-206ENST00000475467 IL13P35225 146 aa16.81■□□□□ 0.28
TTC38-206ENST00000475467 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
TTC38-206ENST00000475467 KIAA1551Q9HCM1 1747 aa16.8■□□□□ 0.28
TTC38-206ENST00000475467 ZPR1O75312 459 aa16.8■□□□□ 0.28
TTC38-206ENST00000475467 PCGF6Q9BYE7 350 aa16.8■□□□□ 0.28
TTC38-206ENST00000475467 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
TTC38-206ENST00000475467 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
TTC38-206ENST00000475467 KDM2BQ8NHM5 1336 aa16.79■□□□□ 0.28
TTC38-206ENST00000475467 ZC3H4Q9UPT8 1303 aaKnown RBP16.79■□□□□ 0.28
TTC38-206ENST00000475467 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
TTC38-206ENST00000475467 SLC52A2Q9HAB3 445 aa16.79■□□□□ 0.28
TTC38-206ENST00000475467 ARFGEF1Q9Y6D6 1849 aa16.79■□□□□ 0.28
TTC38-206ENST00000475467 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
TTC38-206ENST00000475467 BRCA1P38398 1863 aaKnown RBP16.78■□□□□ 0.28
TTC38-206ENST00000475467 KCNA3P22001 575 aa16.78■□□□□ 0.28
TTC38-206ENST00000475467 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
TTC38-206ENST00000475467 RBM46Q8TBY0 533 aaKnown RBP16.78■□□□□ 0.28
TTC38-206ENST00000475467 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.28
TTC38-206ENST00000475467 TM4SF1P30408 202 aa16.77■□□□□ 0.28
TTC38-206ENST00000475467 FSTL1Q12841 308 aa16.77■□□□□ 0.28
TTC38-206ENST00000475467 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.28
TTC38-206ENST00000475467 FKBP8Q14318 412 aa16.76■□□□□ 0.27
TTC38-206ENST00000475467 C9orf131Q5VYM1 1079 aa16.76■□□□□ 0.27
TTC38-206ENST00000475467 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
TTC38-206ENST00000475467 PDZRN3Q9UPQ7 1066 aa16.76■□□□□ 0.27
TTC38-206ENST00000475467 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
TTC38-206ENST00000475467 NARFQ9UHQ1 456 aa16.75■□□□□ 0.27
TTC38-206ENST00000475467 SOS1Q07889 1333 aaPredicted RBP16.74■□□□□ 0.27
TTC38-206ENST00000475467 POLRMTO00411 1230 aaKnown RBP16.74■□□□□ 0.27
TTC38-206ENST00000475467 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
TTC38-206ENST00000475467 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
TTC38-206ENST00000475467 A0A087WZG4 1122 aa16.73■□□□□ 0.27
TTC38-206ENST00000475467 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
TTC38-206ENST00000475467 DDR1Q08345 913 aa16.73■□□□□ 0.27
TTC38-206ENST00000475467 SRP68Q9UHB9 627 aaKnown RBP16.73■□□□□ 0.27
TTC38-206ENST00000475467 MRC1P22897 1456 aa16.73■□□□□ 0.27
TTC38-206ENST00000475467 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
TTC38-206ENST00000475467 STARD3NLO95772 234 aa16.72■□□□□ 0.27
TTC38-206ENST00000475467 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
TTC38-206ENST00000475467 TJP1Q07157 1748 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms