RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 PDILTQ8N807 584 aa11.45□□□□□ -0.58
CDH23-211ENST00000475158 ASXL2Q76L83 1435 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 VGLL3A8MV65 326 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
CDH23-211ENST00000475158 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
CDH23-211ENST00000475158 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
CDH23-211ENST00000475158 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
CDH23-211ENST00000475158 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 GPTP24298 496 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 PIP4K2BP78356 416 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 EIF4A2Q14240 407 aaKnown RBP11.44□□□□□ -0.58
CDH23-211ENST00000475158 NUP133Q8WUM0 1156 aa11.44□□□□□ -0.58
CDH23-211ENST00000475158 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
CDH23-211ENST00000475158 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 ABCF2Q9UG63 623 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 ERICH4A6NGS2 130 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
CDH23-211ENST00000475158 KRT85P78386 507 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
CDH23-211ENST00000475158 UBE3BQ7Z3V4 1068 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 AMOTL1Q8IY63 956 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 A0A087WZG4 1122 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 IGSF3O75054 1194 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 RAB11FIP3O75154 756 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 SMC2O95347 1197 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 SDSP20132 328 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 BMP2KLQ5H9B9 411 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 KCNH5Q8NCM2 988 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
CDH23-211ENST00000475158 TTC21BQ7Z4L5 1316 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 HIP1O00291 1037 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 ASXL1Q8IXJ9 1541 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 RAB11FIP4Q86YS3 637 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 TNMDQ9H2S6 317 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
CDH23-211ENST00000475158 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 FILIP1Q7Z7B0 1213 aa11.42□□□□□ -0.58
CDH23-211ENST00000475158 VAMP4O75379 141 aa11.41□□□□□ -0.58
CDH23-211ENST00000475158 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
CDH23-211ENST00000475158 WDR62O43379 1518 aa11.41□□□□□ -0.58
CDH23-211ENST00000475158 CHPF2Q9P2E5 772 aa11.41□□□□□ -0.58
CDH23-211ENST00000475158 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
CDH23-211ENST00000475158 DBF4Q9UBU7 674 aaPredicted RBP11.41□□□□□ -0.58
CDH23-211ENST00000475158 TCOF1Q13428 1488 aaKnown RBP11.41□□□□□ -0.58
CDH23-211ENST00000475158 SPATA32Q96LK8 384 aa11.41□□□□□ -0.58
CDH23-211ENST00000475158 TPM1P09493 284 aa11.41□□□□□ -0.58
CDH23-211ENST00000475158 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
CDH23-211ENST00000475158 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
CDH23-211ENST00000475158 A0A1W2PP64 1363 aa11.4□□□□□ -0.58
CDH23-211ENST00000475158 A2MP01023 1474 aa11.4□□□□□ -0.58
CDH23-211ENST00000475158 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
CDH23-211ENST00000475158 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
CDH23-211ENST00000475158 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
CDH23-211ENST00000475158 ATP2B2Q01814 1243 aa11.4□□□□□ -0.58
CDH23-211ENST00000475158 NUCB1Q02818 461 aa11.4□□□□□ -0.58
CDH23-211ENST00000475158 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.58
CDH23-211ENST00000475158 CCT2P78371 535 aaKnown RBP11.4□□□□□ -0.59
CDH23-211ENST00000475158 KRT28Q7Z3Y7 464 aa11.4□□□□□ -0.59
CDH23-211ENST00000475158 FAM177A1Q8N128 213 aaPredicted RBP11.4□□□□□ -0.59
CDH23-211ENST00000475158 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.59
CDH23-211ENST00000475158 KIAA0556O60303 1618 aa11.4□□□□□ -0.59
CDH23-211ENST00000475158 DISP1Q96F81 1524 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 SART3Q15020 963 aaKnown RBP11.39□□□□□ -0.59
CDH23-211ENST00000475158 METTL24Q5JXM2 366 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
CDH23-211ENST00000475158 MAGI3Q5TCQ9 1506 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 TTC22Q5TAA0 569 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
CDH23-211ENST00000475158 CTTNBP2Q8WZ74 1663 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 HAND2P61296 217 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 CKAP2LQ8IYA6 745 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
CDH23-211ENST00000475158 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 G2E3Q7L622 706 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 HDAC1Q13547 482 aaPredicted RBP11.38□□□□□ -0.59
CDH23-211ENST00000475158 GOLGA6L1Q8N7Z2 621 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 NECAB1Q8N987 351 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 IFIT1P09914 478 aaKnown RBP11.38□□□□□ -0.59
CDH23-211ENST00000475158 TDO2P48775 406 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 IKQ13123 557 aaPredicted RBP11.38□□□□□ -0.59
CDH23-211ENST00000475158 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 TEX14Q8IWB6 1497 aa11.38□□□□□ -0.59
CDH23-211ENST00000475158 IPO7O95373 1038 aaKnown RBP11.37□□□□□ -0.59
CDH23-211ENST00000475158 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
CDH23-211ENST00000475158 GOLIM4O00461 696 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 PDE1AP54750 535 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
CDH23-211ENST00000475158 RHPN1Q8TCX5 695 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 RAI14Q9P0K7 980 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 BAG4O95429 457 aaKnown RBP11.37□□□□□ -0.59
CDH23-211ENST00000475158 CWF19L2Q2TBE0 894 aaKnown RBP11.37□□□□□ -0.59
CDH23-211ENST00000475158 EYA1Q99502 592 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
CDH23-211ENST00000475158 ZBTB40Q9NUA8 1239 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms