RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 RREB1Q92766 1687 aa10.61□□□□□ -0.71
HPS1-210ENST00000474873 PNISRQ8TF01 805 aaKnown RBP10.61□□□□□ -0.71
HPS1-210ENST00000474873 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
HPS1-210ENST00000474873 RUNDC1Q96C34 613 aa10.61□□□□□ -0.71
HPS1-210ENST00000474873 CCNL1Q9UK58 526 aaPredicted RBP10.61□□□□□ -0.71
HPS1-210ENST00000474873 SCN11AQ9UI33 1791 aa10.61□□□□□ -0.71
HPS1-210ENST00000474873 CEMIPQ8WUJ3 1361 aa10.61□□□□□ -0.71
HPS1-210ENST00000474873 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
HPS1-210ENST00000474873 LOC102724428A0A0B4J2F2 783 aa10.6□□□□□ -0.71
HPS1-210ENST00000474873 SIK1P57059 783 aa10.6□□□□□ -0.71
HPS1-210ENST00000474873 TEFQ10587 303 aa10.6□□□□□ -0.71
HPS1-210ENST00000474873 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
HPS1-210ENST00000474873 LY75O60449 1722 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 KCNQ4P56696 695 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 RIPK4P57078 832 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 C1QTNF8P60827 252 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 R3HDM1Q15032 1099 aaKnown RBP10.59□□□□□ -0.71
HPS1-210ENST00000474873 MCM10Q7L590 875 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 CCDC146Q8IYE0 955 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 STK32BQ9NY57 414 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 MRC1P22897 1456 aa10.59□□□□□ -0.71
HPS1-210ENST00000474873 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
HPS1-210ENST00000474873 SLC34A2O95436 690 aa10.58□□□□□ -0.72
HPS1-210ENST00000474873 TMPOP42166 694 aaKnown RBP10.58□□□□□ -0.72
HPS1-210ENST00000474873 SLC15A2Q16348 729 aa10.58□□□□□ -0.72
HPS1-210ENST00000474873 ANO8Q9HCE9 1232 aaPredicted RBP10.58□□□□□ -0.72
HPS1-210ENST00000474873 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
HPS1-210ENST00000474873 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
HPS1-210ENST00000474873 ATP6V1AP38606 617 aa10.57□□□□□ -0.72
HPS1-210ENST00000474873 LMOD3Q0VAK6 560 aa10.57□□□□□ -0.72
HPS1-210ENST00000474873 DCTN1Q14203 1278 aa10.57□□□□□ -0.72
HPS1-210ENST00000474873 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
HPS1-210ENST00000474873 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
HPS1-210ENST00000474873 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
HPS1-210ENST00000474873 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
HPS1-210ENST00000474873 BTBD11A6QL63 1104 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 SLC39A6Q13433 755 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 ITPK1Q13572 414 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 ZNF827Q17R98 1081 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
HPS1-210ENST00000474873 PAPPAQ13219 1627 aa10.55□□□□□ -0.72
HPS1-210ENST00000474873 CCER2I3L3R5 266 aa10.55□□□□□ -0.72
HPS1-210ENST00000474873 APAF1O14727 1248 aa10.55□□□□□ -0.72
HPS1-210ENST00000474873 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
HPS1-210ENST00000474873 VSIG10Q8N0Z9 540 aa10.55□□□□□ -0.72
HPS1-210ENST00000474873 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
HPS1-210ENST00000474873 TFCP2L1Q9NZI6 479 aa10.55□□□□□ -0.72
HPS1-210ENST00000474873 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
HPS1-210ENST00000474873 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
HPS1-210ENST00000474873 ZNF831Q5JPB2 1677 aa10.54□□□□□ -0.72
HPS1-210ENST00000474873 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
HPS1-210ENST00000474873 LINC00116Q8NCU8 138 aa10.54□□□□□ -0.72
HPS1-210ENST00000474873 TRIM35Q9UPQ4 493 aa10.54□□□□□ -0.72
HPS1-210ENST00000474873 DLG5Q8TDM6 1919 aa10.54□□□□□ -0.72
HPS1-210ENST00000474873 SIPA1L3O60292 1781 aaPredicted RBP10.53□□□□□ -0.72
HPS1-210ENST00000474873 NCBP3Q53F19 620 aaKnown RBP10.53□□□□□ -0.72
HPS1-210ENST00000474873 FLAD1Q8NFF5 587 aa10.53□□□□□ -0.72
HPS1-210ENST00000474873 ZNF496Q96IT1 587 aaPredicted RBP10.53□□□□□ -0.72
HPS1-210ENST00000474873 AK7Q96M32 723 aa10.53□□□□□ -0.72
HPS1-210ENST00000474873 FMNL2Q96PY5 1086 aa10.53□□□□□ -0.72
HPS1-210ENST00000474873 THUMPD2Q9BTF0 503 aaKnown RBP10.53□□□□□ -0.72
HPS1-210ENST00000474873 TEX13AQ9BXU3 409 aaPredicted RBP10.53□□□□□ -0.72
HPS1-210ENST00000474873 BABAM1Q9NWV8 329 aa10.53□□□□□ -0.72
HPS1-210ENST00000474873 KCNQ3O43525 872 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 MIS18AQ9NYP9 233 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 C5P01031 1676 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 CNTNAP4Q9C0A0 1308 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
HPS1-210ENST00000474873 TAF1LQ8IZX4 1826 aa10.51□□□□□ -0.73
HPS1-210ENST00000474873 C4BP0C0L5 1744 aa10.51□□□□□ -0.73
HPS1-210ENST00000474873 STARD3NLO95772 234 aa10.51□□□□□ -0.73
HPS1-210ENST00000474873 CALD1Q05682 793 aaKnown RBP10.51□□□□□ -0.73
HPS1-210ENST00000474873 DNAJC10Q8IXB1 793 aa10.51□□□□□ -0.73
HPS1-210ENST00000474873 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
HPS1-210ENST00000474873 PDGFDQ9GZP0 370 aaPredicted RBP10.51□□□□□ -0.73
HPS1-210ENST00000474873 PNPLA7Q6ZV29 1317 aa10.51□□□□□ -0.73
HPS1-210ENST00000474873 UBR2Q8IWV8 1755 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 CHL1O00533 1208 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 GNPATO15228 680 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 SNRPA1P09661 255 aaKnown RBP10.5□□□□□ -0.73
HPS1-210ENST00000474873 CYP19A1P11511 503 aaPredicted RBP10.5□□□□□ -0.73
HPS1-210ENST00000474873 SSFA2P28290 1259 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 CRKLP46109 303 aaKnown RBP10.5□□□□□ -0.73
HPS1-210ENST00000474873 CCDC27Q2M243 656 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 COL23A1Q86Y22 540 aaPredicted RBP10.5□□□□□ -0.73
HPS1-210ENST00000474873 MIER1Q8N108 512 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 NGEFQ8N5V2 710 aa10.5□□□□□ -0.73
HPS1-210ENST00000474873 RTCBQ9Y3I0 505 aaKnown RBP10.5□□□□□ -0.73
HPS1-210ENST00000474873 CICQ96RK0 1608 aaPredicted RBP10.49□□□□□ -0.73
HPS1-210ENST00000474873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
HPS1-210ENST00000474873 RPS6KA4O75676 772 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 ADRA2BP18089 450 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 EIF4A1P60842 406 aaKnown RBP10.49□□□□□ -0.73
HPS1-210ENST00000474873 TRAPPC3LQ5T215 181 aa10.49□□□□□ -0.73
HPS1-210ENST00000474873 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
HPS1-210ENST00000474873 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms