RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 OGFRQ9NZT2 677 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 USP42Q9H9J4 1324 aaKnown RBP5.09□□□□□ -1.59
USP16-205ENST00000474835 PHLPP1O60346 1717 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 CPP00450 1065 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 KCNJ6P48051 423 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 NAP1L5Q96NT1 182 aaPredicted RBP5.09□□□□□ -1.59
USP16-205ENST00000474835 GEMIN8Q9NWZ8 242 aaKnown RBP5.09□□□□□ -1.59
USP16-205ENST00000474835 WNK3Q9BYP7 1800 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 CDC25BP30305 580 aa5.09□□□□□ -1.6
USP16-205ENST00000474835 GSCP56915 257 aaPredicted RBP5.09□□□□□ -1.6
USP16-205ENST00000474835 C1QBPQ07021 282 aaKnown RBP5.09□□□□□ -1.6
USP16-205ENST00000474835 KIF18AQ8NI77 898 aa5.09□□□□□ -1.6
USP16-205ENST00000474835 TTC14Q96N46 770 aa5.09□□□□□ -1.6
USP16-205ENST00000474835 LTN1O94822 1766 aa5.09□□□□□ -1.6
USP16-205ENST00000474835 TTC21AQ8NDW8 1320 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 FANCGO15287 622 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 PDIA4P13667 645 aaKnown RBP5.08□□□□□ -1.6
USP16-205ENST00000474835 CCDC39Q9UFE4 941 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 NAP1L2Q9ULW6 460 aaPredicted RBP5.08□□□□□ -1.6
USP16-205ENST00000474835 TIAM2Q8IVF5 1701 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 APAF1O14727 1248 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 PLEKHM2Q8IWE5 1019 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 ST3GAL1Q11201 340 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 SCN11AQ9UI33 1791 aa5.08□□□□□ -1.6
USP16-205ENST00000474835 SOS1Q07889 1333 aaPredicted RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 ARFGEF2Q9Y6D5 1785 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 XPCQ01831 940 aaPredicted RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 CHD1LQ86WJ1 897 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 MRPL50Q8N5N7 158 aaKnown RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 RWDD1Q9H446 243 aaPredicted RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 COG6Q9Y2V7 657 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 FHOD1Q9Y613 1164 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 RGPD8O14715 1765 aaPredicted RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 ANKRD36CQ5JPF3 1778 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 RBBP6Q7Z6E9 1792 aaKnown RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 OVOS2A0A0G2JMS6 1433 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 OVOS2A0A0J9YW53 1432 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 OVOS2Q6IE36 1432 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 ATF7IPQ6VMQ6 1270 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 GCC1Q96CN9 775 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 SIRT1Q96EB6 747 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 ALDH8A1Q9H2A2 487 aaPredicted RBP5.07□□□□□ -1.6
USP16-205ENST00000474835 DCTPP1Q9H773 170 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 RGPD2P0DJD1 1756 aa5.07□□□□□ -1.6
USP16-205ENST00000474835 PRAM1Q96QH2 718 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.06□□□□□ -1.6
USP16-205ENST00000474835 CICQ96RK0 1608 aaPredicted RBP5.06□□□□□ -1.6
USP16-205ENST00000474835 SHANK3Q9BYB0 1731 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 NOLC1Q14978 699 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP16-205ENST00000474835 INTS3Q68E01 1043 aaKnown RBP5.06□□□□□ -1.6
USP16-205ENST00000474835 SARM1Q6SZW1 724 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 BCL11BQ9C0K0 894 aaPredicted RBP5.06□□□□□ -1.6
USP16-205ENST00000474835 PSD3Q9NYI0 1048 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 CFDP1Q9UEE9 299 aaPredicted RBP5.06□□□□□ -1.6
USP16-205ENST00000474835 FEZ2Q9UHY8 353 aaPredicted RBP5.06□□□□□ -1.6
USP16-205ENST00000474835 PLEKHG2Q9H7P9 1386 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 SLIT1O75093 1534 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 A0A1W2PP64 1363 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 REC8O95072 547 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 RABEP1Q15276 862 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 GBP4Q96PP9 640 aa5.06□□□□□ -1.6
USP16-205ENST00000474835 TTC22Q5TAA0 569 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 C14orf93Q9H972 538 aaKnown RBP5.05□□□□□ -1.6
USP16-205ENST00000474835 BCL9O00512 1426 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 AOX1Q06278 1338 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 CHMLP26374 656 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 REXO1L1PQ8IX06 675 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 FAM184AQ8NB25 1140 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 RBM42Q9BTD8 480 aaKnown RBP5.05□□□□□ -1.6
USP16-205ENST00000474835 EFCC1Q9HA90 598 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 STAP2Q9UGK3 403 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 ELP1O95163 1332 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 ZC3H4Q9UPT8 1303 aaKnown RBP5.05□□□□□ -1.6
USP16-205ENST00000474835 SLIT3O75094 1523 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 ANAPC15P60006 121 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 CNKSR2Q8WXI2 1034 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 SSH1Q8WYL5 1049 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 DNAJC5Q9H3Z4 198 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 POGZQ7Z3K3 1410 aa5.05□□□□□ -1.6
USP16-205ENST00000474835 KDM6AO15550 1401 aaPredicted RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 NUCB2P80303 420 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 XAGE2Q96GT9 111 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 PYCARDQ9ULZ3 195 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 DDX19BQ9UMR2 479 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 MYH2Q9UKX2 1941 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 C11orf91Q3C1V1 193 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 FTSJ3Q8IY81 847 aaKnown RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 TMX1Q9H3N1 280 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 SLC52A1Q9NWF4 448 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 NEO1Q92859 1461 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 GIGYF1O75420 1035 aaPredicted RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 KMT5BQ4FZB7 885 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 SWT1Q5T5J6 900 aaKnown RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 PPP4R3CPQ6ZMV5 832 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 DZIP1LQ8IYY4 767 aaKnown RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 TCP11L2Q8N4U5 519 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 BBXQ8WY36 941 aaPredicted RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 R3HCC1Q9Y3T6 440 aaKnown RBP5.04□□□□□ -1.6
USP16-205ENST00000474835 KIF1AQ12756 1690 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms