RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
COPS6-208ENST00000474823 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
COPS6-208ENST00000474823 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
COPS6-208ENST00000474823 MCM10Q7L590 875 aa13.86□□□□□ -0.19
COPS6-208ENST00000474823 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
COPS6-208ENST00000474823 CCNL1Q9UK58 526 aaPredicted RBP13.86□□□□□ -0.19
COPS6-208ENST00000474823 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
COPS6-208ENST00000474823 PROM2Q8N271 834 aa13.85□□□□□ -0.19
COPS6-208ENST00000474823 ATG3Q9NT62 314 aa13.85□□□□□ -0.19
COPS6-208ENST00000474823 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
COPS6-208ENST00000474823 CEMIPQ8WUJ3 1361 aa13.84□□□□□ -0.19
COPS6-208ENST00000474823 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
COPS6-208ENST00000474823 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
COPS6-208ENST00000474823 MRC1P22897 1456 aa13.84□□□□□ -0.19
COPS6-208ENST00000474823 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.2
COPS6-208ENST00000474823 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.2
COPS6-208ENST00000474823 APAF1O14727 1248 aa13.83□□□□□ -0.2
COPS6-208ENST00000474823 SIK1P57059 783 aa13.83□□□□□ -0.2
COPS6-208ENST00000474823 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
COPS6-208ENST00000474823 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
COPS6-208ENST00000474823 RREB1Q92766 1687 aa13.82□□□□□ -0.2
COPS6-208ENST00000474823 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
COPS6-208ENST00000474823 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
COPS6-208ENST00000474823 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
COPS6-208ENST00000474823 MIER1Q8N108 512 aa13.82□□□□□ -0.2
COPS6-208ENST00000474823 LRRC4BQ9NT99 713 aa13.82□□□□□ -0.2
COPS6-208ENST00000474823 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
COPS6-208ENST00000474823 KCNQ4P56696 695 aa13.81□□□□□ -0.2
COPS6-208ENST00000474823 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
COPS6-208ENST00000474823 TAF7Q15545 349 aaPredicted RBP13.81□□□□□ -0.2
COPS6-208ENST00000474823 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
COPS6-208ENST00000474823 LY75O60449 1722 aa13.81□□□□□ -0.2
COPS6-208ENST00000474823 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
COPS6-208ENST00000474823 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
COPS6-208ENST00000474823 NUP188Q5SRE5 1749 aa13.8□□□□□ -0.2
COPS6-208ENST00000474823 R3HDM1Q15032 1099 aaKnown RBP13.79□□□□□ -0.2
COPS6-208ENST00000474823 CALD1Q05682 793 aaKnown RBP13.78□□□□□ -0.2
COPS6-208ENST00000474823 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
COPS6-208ENST00000474823 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
COPS6-208ENST00000474823 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
COPS6-208ENST00000474823 PSDA5PKW4 1024 aaPredicted RBP13.77□□□□□ -0.21
COPS6-208ENST00000474823 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
COPS6-208ENST00000474823 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.21
COPS6-208ENST00000474823 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
COPS6-208ENST00000474823 ITPK1Q13572 414 aa13.76□□□□□ -0.21
COPS6-208ENST00000474823 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
COPS6-208ENST00000474823 ZNF496Q96IT1 587 aaPredicted RBP13.76□□□□□ -0.21
COPS6-208ENST00000474823 AK7Q96M32 723 aa13.76□□□□□ -0.21
COPS6-208ENST00000474823 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
COPS6-208ENST00000474823 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
COPS6-208ENST00000474823 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 ZNF827Q17R98 1081 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
COPS6-208ENST00000474823 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
COPS6-208ENST00000474823 C5P01031 1676 aa13.75□□□□□ -0.21
COPS6-208ENST00000474823 HEG1Q9ULI3 1381 aa13.74□□□□□ -0.21
COPS6-208ENST00000474823 KCNQ3O43525 872 aa13.74□□□□□ -0.21
COPS6-208ENST00000474823 CCDC27Q2M243 656 aa13.74□□□□□ -0.21
COPS6-208ENST00000474823 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
COPS6-208ENST00000474823 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
COPS6-208ENST00000474823 TEX13AQ9BXU3 409 aaPredicted RBP13.74□□□□□ -0.21
COPS6-208ENST00000474823 SALL2Q9Y467 1007 aaPredicted RBP13.74□□□□□ -0.21
COPS6-208ENST00000474823 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
COPS6-208ENST00000474823 STARD3NLO95772 234 aa13.73□□□□□ -0.21
COPS6-208ENST00000474823 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 TAF1LQ8IZX4 1826 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 GNPATO15228 680 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
COPS6-208ENST00000474823 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
COPS6-208ENST00000474823 WWC1Q8IX03 1113 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 C4BP0C0L5 1744 aa13.72□□□□□ -0.21
COPS6-208ENST00000474823 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
COPS6-208ENST00000474823 CNTNAP4Q9C0A0 1308 aa13.71□□□□□ -0.21
COPS6-208ENST00000474823 CHL1O00533 1208 aa13.71□□□□□ -0.21
COPS6-208ENST00000474823 MSH5O43196 834 aa13.71□□□□□ -0.21
COPS6-208ENST00000474823 CRKLP46109 303 aaKnown RBP13.71□□□□□ -0.21
COPS6-208ENST00000474823 GNAI1P63096 354 aa13.71□□□□□ -0.21
COPS6-208ENST00000474823 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
COPS6-208ENST00000474823 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.21
COPS6-208ENST00000474823 PHF14O94880 888 aa13.7□□□□□ -0.22
COPS6-208ENST00000474823 CYP19A1P11511 503 aaPredicted RBP13.7□□□□□ -0.22
COPS6-208ENST00000474823 SSFA2P28290 1259 aa13.7□□□□□ -0.22
COPS6-208ENST00000474823 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
COPS6-208ENST00000474823 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
COPS6-208ENST00000474823 PNPLA7Q6ZV29 1317 aa13.69□□□□□ -0.22
COPS6-208ENST00000474823 TJP1Q07157 1748 aa13.69□□□□□ -0.22
COPS6-208ENST00000474823 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
COPS6-208ENST00000474823 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
COPS6-208ENST00000474823 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
COPS6-208ENST00000474823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
COPS6-208ENST00000474823 GIGYF1O75420 1035 aaPredicted RBP13.68□□□□□ -0.22
COPS6-208ENST00000474823 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
COPS6-208ENST00000474823 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms