RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 RXRBP28702 533 aa26.51■■□□□ 1.83
SH3D21-202ENST00000474766 MAP3K19Q56UN5 1328 aa26.51■■□□□ 1.83
SH3D21-202ENST00000474766 MRE11P49959 708 aa26.5■■□□□ 1.83
SH3D21-202ENST00000474766 RBM6P78332 1123 aaKnown RBP26.5■■□□□ 1.83
SH3D21-202ENST00000474766 ITPRIPQ8IWB1 547 aa26.5■■□□□ 1.83
SH3D21-202ENST00000474766 CHMP5Q9NZZ3 219 aa26.5■■□□□ 1.83
SH3D21-202ENST00000474766 GJD4Q96KN9 370 aaPredicted RBP26.49■■□□□ 1.83
SH3D21-202ENST00000474766 ZNF853P0CG23 659 aa26.49■■□□□ 1.83
SH3D21-202ENST00000474766 TMEM57Q8N5G2 664 aa26.49■■□□□ 1.83
SH3D21-202ENST00000474766 ZBTB40Q9NUA8 1239 aa26.49■■□□□ 1.83
SH3D21-202ENST00000474766 IFT57Q9NWB7 429 aa26.49■■□□□ 1.83
SH3D21-202ENST00000474766 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
SH3D21-202ENST00000474766 GNAI1P63096 354 aa26.47■■□□□ 1.83
SH3D21-202ENST00000474766 CCDC9Q9Y3X0 531 aaKnown RBP26.47■■□□□ 1.83
SH3D21-202ENST00000474766 RRP9O43818 475 aaKnown RBP26.46■■□□□ 1.83
SH3D21-202ENST00000474766 LARP1Q6PKG0 1096 aaKnown RBP26.46■■□□□ 1.83
SH3D21-202ENST00000474766 RGS12O14924 1447 aa26.46■■□□□ 1.83
SH3D21-202ENST00000474766 SPATA31A5Q5VU36 1347 aa26.45■■□□□ 1.83
SH3D21-202ENST00000474766 SPATA31A7Q8IWB4 1347 aa26.45■■□□□ 1.83
SH3D21-202ENST00000474766 VAMP4O75379 141 aa26.45■■□□□ 1.82
SH3D21-202ENST00000474766 EVA1CP58658 441 aa26.45■■□□□ 1.82
SH3D21-202ENST00000474766 LMOD3Q0VAK6 560 aa26.44■■□□□ 1.82
SH3D21-202ENST00000474766 SMC5Q8IY18 1101 aa26.44■■□□□ 1.82
SH3D21-202ENST00000474766 THUMPD2Q9BTF0 503 aaKnown RBP26.44■■□□□ 1.82
SH3D21-202ENST00000474766 DLG5Q8TDM6 1919 aa26.44■■□□□ 1.82
SH3D21-202ENST00000474766 DDX11L8A8MPP1 907 aa26.43■■□□□ 1.82
SH3D21-202ENST00000474766 TRAK2O60296 914 aa26.43■■□□□ 1.82
SH3D21-202ENST00000474766 ARHGAP45Q92619 1136 aa26.43■■□□□ 1.82
SH3D21-202ENST00000474766 NAP1L5Q96NT1 182 aaPredicted RBP26.43■■□□□ 1.82
SH3D21-202ENST00000474766 IP6K1Q92551 441 aa26.42■■□□□ 1.82
SH3D21-202ENST00000474766 SPATA31A1Q5TZJ5 1347 aa26.42■■□□□ 1.82
SH3D21-202ENST00000474766 HOXC9P31274 260 aa26.41■■□□□ 1.82
SH3D21-202ENST00000474766 AMPHP49418 695 aa26.41■■□□□ 1.82
SH3D21-202ENST00000474766 HSP90AA1P07900 732 aaKnown RBP26.41■■□□□ 1.82
SH3D21-202ENST00000474766 MRPL50Q8N5N7 158 aaKnown RBP26.41■■□□□ 1.82
SH3D21-202ENST00000474766 CFAP44Q96MT7 982 aa26.41■■□□□ 1.82
SH3D21-202ENST00000474766 MBIPQ9NS73 344 aa26.41■■□□□ 1.82
SH3D21-202ENST00000474766 CRB1P82279 1406 aa26.4■■□□□ 1.82
SH3D21-202ENST00000474766 WDR17Q8IZU2 1322 aa26.4■■□□□ 1.82
SH3D21-202ENST00000474766 RTL1A6NKG5 1358 aa26.4■■□□□ 1.82
SH3D21-202ENST00000474766 ERBB3P21860 1342 aa26.4■■□□□ 1.82
SH3D21-202ENST00000474766 KIF24Q5T7B8 1368 aa26.4■■□□□ 1.82
SH3D21-202ENST00000474766 HSP90AB2PQ58FF8 381 aa26.39■■□□□ 1.82
SH3D21-202ENST00000474766 TSPYL6Q8N831 410 aa26.39■■□□□ 1.81
SH3D21-202ENST00000474766 FLT4P35916 1363 aa26.38■■□□□ 1.81
SH3D21-202ENST00000474766 PANK2Q9BZ23 570 aa26.38■■□□□ 1.81
SH3D21-202ENST00000474766 C22orf23Q9BZE7 217 aa26.38■■□□□ 1.81
SH3D21-202ENST00000474766 BRWD3Q6RI45 1802 aa26.37■■□□□ 1.81
SH3D21-202ENST00000474766 FAM98CQ17RN3 349 aaKnown RBP26.37■■□□□ 1.81
SH3D21-202ENST00000474766 ANKRD24Q8TF21 1146 aa26.37■■□□□ 1.81
SH3D21-202ENST00000474766 THSD7AQ9UPZ6 1657 aa26.36■■□□□ 1.81
SH3D21-202ENST00000474766 RGPD2P0DJD1 1756 aa26.36■■□□□ 1.81
SH3D21-202ENST00000474766 EIF4A2Q14240 407 aaKnown RBP26.36■■□□□ 1.81
SH3D21-202ENST00000474766 HSP90AA2PQ14568 343 aaPredicted RBP26.36■■□□□ 1.81
SH3D21-202ENST00000474766 TOM1L2Q6ZVM7 507 aa26.36■■□□□ 1.81
SH3D21-202ENST00000474766 CSB-PGBD3P0DP91 1061 aa26.35■■□□□ 1.81
SH3D21-202ENST00000474766 GRPEL1Q9HAV7 217 aa26.35■■□□□ 1.81
SH3D21-202ENST00000474766 WNK3Q9BYP7 1800 aa26.35■■□□□ 1.81
SH3D21-202ENST00000474766 FAM208AQ9UK61 1670 aaKnown RBP26.35■■□□□ 1.81
SH3D21-202ENST00000474766 ONECUT3O60422 494 aaPredicted RBP26.34■■□□□ 1.81
SH3D21-202ENST00000474766 ZBTB7BO15156 539 aaPredicted RBP26.34■■□□□ 1.81
SH3D21-202ENST00000474766 LTV1Q96GA3 475 aaPredicted RBP26.34■■□□□ 1.81
SH3D21-202ENST00000474766 CHMP4BQ9H444 224 aaKnown RBP26.34■■□□□ 1.81
SH3D21-202ENST00000474766 TWISTNBQ3B726 338 aaPredicted RBP26.33■■□□□ 1.81
SH3D21-202ENST00000474766 PODXL2Q9NZ53 605 aa26.33■■□□□ 1.81
SH3D21-202ENST00000474766 ABCC4O15439 1325 aa26.32■■□□□ 1.8
SH3D21-202ENST00000474766 ESPNB1AK53 854 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 PTMSP20962 102 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 NUCB1Q02818 461 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 SEPT12Q8IYM1 358 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 C8orf58Q8NAV2 365 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 GZF1Q9H116 711 aaPredicted RBP26.31■■□□□ 1.8
SH3D21-202ENST00000474766 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 HSCBQ8IWL3 235 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 CARD10Q9BWT7 1032 aa26.31■■□□□ 1.8
SH3D21-202ENST00000474766 DDIT3P35638 169 aa26.3■■□□□ 1.8
SH3D21-202ENST00000474766 AEBP1Q8IUX7 1158 aa26.3■■□□□ 1.8
SH3D21-202ENST00000474766 SULT6B1Q6IMI4 303 aa26.29■■□□□ 1.8
SH3D21-202ENST00000474766 BARGINQ6ZT62 677 aa26.29■■□□□ 1.8
SH3D21-202ENST00000474766 NLRP2Q9NX02 1062 aa26.29■■□□□ 1.8
SH3D21-202ENST00000474766 CIZ1Q9ULV3 898 aaPredicted RBP26.29■■□□□ 1.8
SH3D21-202ENST00000474766 ELL2O00472 640 aaPredicted RBP26.28■■□□□ 1.8
SH3D21-202ENST00000474766 SNX21Q969T3 373 aa26.28■■□□□ 1.8
SH3D21-202ENST00000474766 THRAP3Q9Y2W1 955 aaKnown RBP26.28■■□□□ 1.8
SH3D21-202ENST00000474766 EP400Q96L91 3159 aa26.28■■□□□ 1.8
SH3D21-202ENST00000474766 A0A0G2JS52 829 aa26.27■■□□□ 1.8
SH3D21-202ENST00000474766 PARP4Q9UKK3 1724 aaKnown RBP26.27■■□□□ 1.8
SH3D21-202ENST00000474766 DCTN1Q14203 1278 aa26.27■■□□□ 1.8
SH3D21-202ENST00000474766 SKOR2Q2VWA4 1001 aaPredicted RBP26.26■■□□□ 1.79
SH3D21-202ENST00000474766 ARXQ96QS3 562 aa26.25■■□□□ 1.79
SH3D21-202ENST00000474766 API5Q9BZZ5 524 aaKnown RBP26.25■■□□□ 1.79
SH3D21-202ENST00000474766 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
SH3D21-202ENST00000474766 LRRC37A3O60309 1634 aa26.24■■□□□ 1.79
SH3D21-202ENST00000474766 TPM2P07951 284 aa26.24■■□□□ 1.79
SH3D21-202ENST00000474766 CHD1LQ86WJ1 897 aa26.24■■□□□ 1.79
SH3D21-202ENST00000474766 SPRYD3Q8NCJ5 442 aa26.24■■□□□ 1.79
SH3D21-202ENST00000474766 CHL1O00533 1208 aa26.23■■□□□ 1.79
SH3D21-202ENST00000474766 RBM25P49756 843 aaKnown RBP26.23■■□□□ 1.79
SH3D21-202ENST00000474766 MFAP1P55081 439 aaKnown RBP26.23■■□□□ 1.79
SH3D21-202ENST00000474766 GCC1Q96CN9 775 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms