RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
COL8A1-206ENST00000474648 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
COL8A1-206ENST00000474648 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
COL8A1-206ENST00000474648 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
COL8A1-206ENST00000474648 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
COL8A1-206ENST00000474648 KDM6AO15550 1401 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-206ENST00000474648 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
COL8A1-206ENST00000474648 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
COL8A1-206ENST00000474648 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
COL8A1-206ENST00000474648 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
COL8A1-206ENST00000474648 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
COL8A1-206ENST00000474648 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
COL8A1-206ENST00000474648 IL16Q14005 1332 aa13.1□□□□□ -0.31
COL8A1-206ENST00000474648 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
COL8A1-206ENST00000474648 CHL1O00533 1208 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 RGS12O14924 1447 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 SLFN5Q08AF3 891 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
COL8A1-206ENST00000474648 KRT27Q7Z3Y8 459 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
COL8A1-206ENST00000474648 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
COL8A1-206ENST00000474648 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
COL8A1-206ENST00000474648 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
COL8A1-206ENST00000474648 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
COL8A1-206ENST00000474648 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
COL8A1-206ENST00000474648 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
COL8A1-206ENST00000474648 BCL9O00512 1426 aa13.07□□□□□ -0.32
COL8A1-206ENST00000474648 CABP4P57796 275 aa13.07□□□□□ -0.32
COL8A1-206ENST00000474648 PIGBQ92521 554 aa13.07□□□□□ -0.32
COL8A1-206ENST00000474648 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
COL8A1-206ENST00000474648 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 E9PSI1 815 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 KCNQ2O43526 872 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 GNAI1P63096 354 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 TEFQ10587 303 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 ACSBG1Q96GR2 724 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
COL8A1-206ENST00000474648 KCNQ3O43525 872 aa13.05□□□□□ -0.32
COL8A1-206ENST00000474648 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
COL8A1-206ENST00000474648 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
COL8A1-206ENST00000474648 PTF1AQ7RTS3 328 aa13.05□□□□□ -0.32
COL8A1-206ENST00000474648 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
COL8A1-206ENST00000474648 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
COL8A1-206ENST00000474648 DLG5Q8TDM6 1919 aa13.04□□□□□ -0.32
COL8A1-206ENST00000474648 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
COL8A1-206ENST00000474648 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
COL8A1-206ENST00000474648 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
COL8A1-206ENST00000474648 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
COL8A1-206ENST00000474648 MRC1P22897 1456 aa13.04□□□□□ -0.32
COL8A1-206ENST00000474648 SLC39A6Q13433 755 aa13.03□□□□□ -0.32
COL8A1-206ENST00000474648 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
COL8A1-206ENST00000474648 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
COL8A1-206ENST00000474648 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
COL8A1-206ENST00000474648 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
COL8A1-206ENST00000474648 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
COL8A1-206ENST00000474648 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
COL8A1-206ENST00000474648 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
COL8A1-206ENST00000474648 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
COL8A1-206ENST00000474648 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-206ENST00000474648 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
COL8A1-206ENST00000474648 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
COL8A1-206ENST00000474648 EXOSC9Q06265 439 aaKnown RBP13□□□□□ -0.33
COL8A1-206ENST00000474648 KRT24Q2M2I5 525 aa13□□□□□ -0.33
COL8A1-206ENST00000474648 C8orf58Q8NAV2 365 aa13□□□□□ -0.33
COL8A1-206ENST00000474648 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
COL8A1-206ENST00000474648 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
COL8A1-206ENST00000474648 TRIM37O94972 964 aa12.99□□□□□ -0.33
COL8A1-206ENST00000474648 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
COL8A1-206ENST00000474648 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
COL8A1-206ENST00000474648 VAMP4O75379 141 aa12.97□□□□□ -0.33
COL8A1-206ENST00000474648 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
COL8A1-206ENST00000474648 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
COL8A1-206ENST00000474648 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.33
COL8A1-206ENST00000474648 ELL2O00472 640 aaPredicted RBP12.96□□□□□ -0.33
COL8A1-206ENST00000474648 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
COL8A1-206ENST00000474648 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
COL8A1-206ENST00000474648 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
COL8A1-206ENST00000474648 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
COL8A1-206ENST00000474648 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
COL8A1-206ENST00000474648 FMNL2Q96PY5 1086 aa12.96□□□□□ -0.33
COL8A1-206ENST00000474648 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.34
COL8A1-206ENST00000474648 DOT1LQ8TEK3 1739 aa12.94□□□□□ -0.34
COL8A1-206ENST00000474648 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-206ENST00000474648 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
COL8A1-206ENST00000474648 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
COL8A1-206ENST00000474648 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
COL8A1-206ENST00000474648 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
COL8A1-206ENST00000474648 ITGB4P16144 1822 aa12.93□□□□□ -0.34
COL8A1-206ENST00000474648 LOC102724428A0A0B4J2F2 783 aa12.93□□□□□ -0.34
COL8A1-206ENST00000474648 HOXB7P09629 217 aa12.93□□□□□ -0.34
COL8A1-206ENST00000474648 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
COL8A1-206ENST00000474648 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-206ENST00000474648 SIK1P57059 783 aa12.93□□□□□ -0.34
COL8A1-206ENST00000474648 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
COL8A1-206ENST00000474648 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-206ENST00000474648 PLSCR1O15162 318 aa12.92□□□□□ -0.34
COL8A1-206ENST00000474648 APBA3O96018 575 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms