RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 EZH2Q15910 746 aaKnown RBP23.9■■□□□ 1.42
SNRPB-203ENST00000474384 CAMKK2Q96RR4 588 aa23.9■■□□□ 1.42
SNRPB-203ENST00000474384 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.41
SNRPB-203ENST00000474384 TEFQ10587 303 aa23.88■■□□□ 1.41
SNRPB-203ENST00000474384 ASAP1Q9ULH1 1129 aa23.88■■□□□ 1.41
SNRPB-203ENST00000474384 CEMIPQ8WUJ3 1361 aa23.88■■□□□ 1.41
SNRPB-203ENST00000474384 ATG3Q9NT62 314 aa23.87■■□□□ 1.41
SNRPB-203ENST00000474384 MRC1P22897 1456 aa23.87■■□□□ 1.41
SNRPB-203ENST00000474384 THUMPD2Q9BTF0 503 aaKnown RBP23.86■■□□□ 1.41
SNRPB-203ENST00000474384 PROM2Q8N271 834 aa23.85■■□□□ 1.41
SNRPB-203ENST00000474384 TRIM35Q9UPQ4 493 aa23.85■■□□□ 1.41
SNRPB-203ENST00000474384 LMOD3Q0VAK6 560 aa23.84■■□□□ 1.41
SNRPB-203ENST00000474384 TXNRD1Q16881 649 aa23.84■■□□□ 1.41
SNRPB-203ENST00000474384 SMARCC1Q92922 1105 aaPredicted RBP23.84■■□□□ 1.41
SNRPB-203ENST00000474384 PALLDQ8WX93 1383 aa23.83■■□□□ 1.41
SNRPB-203ENST00000474384 SLC39A6Q13433 755 aa23.82■■□□□ 1.4
SNRPB-203ENST00000474384 RGPD3A6NKT7 1758 aaPredicted RBP23.82■■□□□ 1.4
SNRPB-203ENST00000474384 RGPD4Q7Z3J3 1758 aa23.82■■□□□ 1.4
SNRPB-203ENST00000474384 SIPA1L3O60292 1781 aaPredicted RBP23.81■■□□□ 1.4
SNRPB-203ENST00000474384 BTBD11A6QL63 1104 aa23.8■■□□□ 1.4
SNRPB-203ENST00000474384 LY75O60449 1722 aa23.8■■□□□ 1.4
SNRPB-203ENST00000474384 KCNQ4P56696 695 aa23.8■■□□□ 1.4
SNRPB-203ENST00000474384 TAF7Q15545 349 aaPredicted RBP23.8■■□□□ 1.4
SNRPB-203ENST00000474384 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
SNRPB-203ENST00000474384 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
SNRPB-203ENST00000474384 RBM42Q9BTD8 480 aaKnown RBP23.78■■□□□ 1.4
SNRPB-203ENST00000474384 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
SNRPB-203ENST00000474384 CCNL1Q9UK58 526 aaPredicted RBP23.78■■□□□ 1.4
SNRPB-203ENST00000474384 SALL2Q9Y467 1007 aaPredicted RBP23.78■■□□□ 1.4
SNRPB-203ENST00000474384 RREB1Q92766 1687 aa23.78■■□□□ 1.4
SNRPB-203ENST00000474384 LOC102724428A0A0B4J2F2 783 aa23.77■■□□□ 1.4
SNRPB-203ENST00000474384 SIK1P57059 783 aa23.77■■□□□ 1.4
SNRPB-203ENST00000474384 SLC27A3Q5K4L6 730 aa23.77■■□□□ 1.4
SNRPB-203ENST00000474384 KCNQ3O43525 872 aa23.76■■□□□ 1.39
SNRPB-203ENST00000474384 PAPPAQ13219 1627 aa23.76■■□□□ 1.39
SNRPB-203ENST00000474384 ZNF790Q6PG37 636 aa23.75■■□□□ 1.39
SNRPB-203ENST00000474384 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
SNRPB-203ENST00000474384 SLC4A9Q96Q91 983 aa23.75■■□□□ 1.39
SNRPB-203ENST00000474384 NUP188Q5SRE5 1749 aa23.74■■□□□ 1.39
SNRPB-203ENST00000474384 ATP6V1AP38606 617 aa23.74■■□□□ 1.39
SNRPB-203ENST00000474384 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
SNRPB-203ENST00000474384 NCBP3Q53F19 620 aaKnown RBP23.73■■□□□ 1.39
SNRPB-203ENST00000474384 WWC1Q8IX03 1113 aa23.72■■□□□ 1.39
SNRPB-203ENST00000474384 LAS1LQ9Y4W2 734 aaKnown RBP23.72■■□□□ 1.39
SNRPB-203ENST00000474384 KCPQ6ZWJ8 1503 aa23.71■■□□□ 1.39
SNRPB-203ENST00000474384 ITPK1Q13572 414 aa23.71■■□□□ 1.39
SNRPB-203ENST00000474384 ZNF496Q96IT1 587 aaPredicted RBP23.71■■□□□ 1.39
SNRPB-203ENST00000474384 TSPYL4Q9UJ04 414 aa23.7■■□□□ 1.38
SNRPB-203ENST00000474384 UBR2Q8IWV8 1755 aa23.7■■□□□ 1.38
SNRPB-203ENST00000474384 CALD1Q05682 793 aaKnown RBP23.69■■□□□ 1.38
SNRPB-203ENST00000474384 NBPF14Q5TI25 921 aa23.69■■□□□ 1.38
SNRPB-203ENST00000474384 NGEFQ8N5V2 710 aa23.68■■□□□ 1.38
SNRPB-203ENST00000474384 LINC00116Q8NCU8 138 aa23.68■■□□□ 1.38
SNRPB-203ENST00000474384 FMNL2Q96PY5 1086 aa23.68■■□□□ 1.38
SNRPB-203ENST00000474384 ANO8Q9HCE9 1232 aaPredicted RBP23.68■■□□□ 1.38
SNRPB-203ENST00000474384 BABAM1Q9NWV8 329 aa23.68■■□□□ 1.38
SNRPB-203ENST00000474384 KDM3BQ7LBC6 1761 aa23.68■■□□□ 1.38
SNRPB-203ENST00000474384 CHL1O00533 1208 aa23.67■■□□□ 1.38
SNRPB-203ENST00000474384 CFAP44Q96MT7 982 aa23.67■■□□□ 1.38
SNRPB-203ENST00000474384 TAF1LQ8IZX4 1826 aa23.67■■□□□ 1.38
SNRPB-203ENST00000474384 DNAJC10Q8IXB1 793 aa23.66■■□□□ 1.38
SNRPB-203ENST00000474384 VSIG10Q8N0Z9 540 aa23.66■■□□□ 1.38
SNRPB-203ENST00000474384 STK32BQ9NY57 414 aa23.66■■□□□ 1.38
SNRPB-203ENST00000474384 C5P01031 1676 aa23.66■■□□□ 1.38
SNRPB-203ENST00000474384 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
SNRPB-203ENST00000474384 HEG1Q9ULI3 1381 aa23.65■■□□□ 1.38
SNRPB-203ENST00000474384 ZNF853P0CG23 659 aa23.65■■□□□ 1.38
SNRPB-203ENST00000474384 GNAI1P63096 354 aa23.65■■□□□ 1.38
SNRPB-203ENST00000474384 ZNF827Q17R98 1081 aa23.65■■□□□ 1.38
SNRPB-203ENST00000474384 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
SNRPB-203ENST00000474384 HMGB2P26583 209 aaKnown RBP23.64■■□□□ 1.37
SNRPB-203ENST00000474384 EIF4A1P60842 406 aaKnown RBP23.64■■□□□ 1.37
SNRPB-203ENST00000474384 SLC15A2Q16348 729 aa23.64■■□□□ 1.37
SNRPB-203ENST00000474384 AKT1S1Q96B36 256 aa23.64■■□□□ 1.37
SNRPB-203ENST00000474384 TJP1Q07157 1748 aa23.64■■□□□ 1.37
SNRPB-203ENST00000474384 WDR63Q8IWG1 891 aa23.63■■□□□ 1.37
SNRPB-203ENST00000474384 MBIPQ9NS73 344 aa23.63■■□□□ 1.37
SNRPB-203ENST00000474384 C4BP0C0L5 1744 aa23.62■■□□□ 1.37
SNRPB-203ENST00000474384 PRAMEF22A3QJZ6 481 aa23.62■■□□□ 1.37
SNRPB-203ENST00000474384 R3HDM1Q15032 1099 aaKnown RBP23.62■■□□□ 1.37
SNRPB-203ENST00000474384 PSDA5PKW4 1024 aaPredicted RBP23.61■■□□□ 1.37
SNRPB-203ENST00000474384 SNRPA1P09661 255 aaKnown RBP23.61■■□□□ 1.37
SNRPB-203ENST00000474384 COL5A3P25940 1745 aaPredicted RBP23.61■■□□□ 1.37
SNRPB-203ENST00000474384 IL16Q14005 1332 aa23.6■■□□□ 1.37
SNRPB-203ENST00000474384 CICQ96RK0 1608 aaPredicted RBP23.6■■□□□ 1.37
SNRPB-203ENST00000474384 CYP19A1P11511 503 aaPredicted RBP23.6■■□□□ 1.37
SNRPB-203ENST00000474384 AK7Q96M32 723 aa23.6■■□□□ 1.37
SNRPB-203ENST00000474384 TEX13AQ9BXU3 409 aaPredicted RBP23.6■■□□□ 1.37
SNRPB-203ENST00000474384 TFCP2L1Q9NZI6 479 aa23.6■■□□□ 1.37
SNRPB-203ENST00000474384 ZNF521Q96K83 1311 aa23.59■■□□□ 1.37
SNRPB-203ENST00000474384 CRKLP46109 303 aaKnown RBP23.59■■□□□ 1.37
SNRPB-203ENST00000474384 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.37
SNRPB-203ENST00000474384 STARD3NLO95772 234 aa23.58■■□□□ 1.37
SNRPB-203ENST00000474384 RC3H1Q5TC82 1133 aaKnown RBP23.58■■□□□ 1.37
SNRPB-203ENST00000474384 TSR2Q969E8 191 aaKnown RBP23.58■■□□□ 1.37
SNRPB-203ENST00000474384 USP16Q9Y5T5 823 aa23.58■■□□□ 1.37
SNRPB-203ENST00000474384 CNTNAP4Q9C0A0 1308 aa23.58■■□□□ 1.36
SNRPB-203ENST00000474384 HNRNPUQ00839 825 aaKnown RBP eCLIP23.57■■□□□ 1.36
SNRPB-203ENST00000474384 KRT24Q2M2I5 525 aa23.57■■□□□ 1.36
SNRPB-203ENST00000474384 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms