RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 HDGFL2Q7Z4V5 671 aaPredicted RBP22.47■■□□□ 1.19
ECHDC1-214ENST00000474289 PYCARDQ9ULZ3 195 aa22.47■■□□□ 1.19
ECHDC1-214ENST00000474289 KIF20BQ96Q89 1820 aa22.47■■□□□ 1.19
ECHDC1-214ENST00000474289 KRT24Q2M2I5 525 aa22.47■■□□□ 1.19
ECHDC1-214ENST00000474289 ESYT1Q9BSJ8 1104 aa22.47■■□□□ 1.19
ECHDC1-214ENST00000474289 DLG5Q8TDM6 1919 aa22.46■■□□□ 1.19
ECHDC1-214ENST00000474289 CHAF1AQ13111 956 aaPredicted RBP22.46■■□□□ 1.19
ECHDC1-214ENST00000474289 MEIS3Q99687 375 aa22.46■■□□□ 1.19
ECHDC1-214ENST00000474289 CTIFO43310 598 aaKnown RBP22.46■■□□□ 1.19
ECHDC1-214ENST00000474289 SRCIN1Q9C0H9 1055 aa22.46■■□□□ 1.19
ECHDC1-214ENST00000474289 MCCP23508 829 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 ANAPC15P60006 121 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 PLCB2Q00722 1185 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 CDK19Q9BWU1 502 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 RIMS2Q9UQ26 1411 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 IGSF3O75054 1194 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 TPRNQ4KMQ1 711 aa22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 UPF3BQ9BZI7 483 aaKnown RBP22.45■■□□□ 1.18
ECHDC1-214ENST00000474289 RPAP1Q9BWH6 1393 aaPredicted RBP22.44■■□□□ 1.18
ECHDC1-214ENST00000474289 AP5Z1O43299 807 aa22.44■■□□□ 1.18
ECHDC1-214ENST00000474289 CNPY2Q9Y2B0 182 aa22.44■■□□□ 1.18
ECHDC1-214ENST00000474289 MYO5BQ9ULV0 1848 aa22.44■■□□□ 1.18
ECHDC1-214ENST00000474289 TSHZ3Q63HK5 1081 aa22.43■■□□□ 1.18
ECHDC1-214ENST00000474289 CLTCQ00610 1675 aaKnown RBP22.43■■□□□ 1.18
ECHDC1-214ENST00000474289 ANO2Q9NQ90 1003 aa22.42■■□□□ 1.18
ECHDC1-214ENST00000474289 YTHDC2Q9H6S0 1430 aaKnown RBP22.42■■□□□ 1.18
ECHDC1-214ENST00000474289 RAPGEF3O95398 923 aa22.42■■□□□ 1.18
ECHDC1-214ENST00000474289 FUCA2Q9BTY2 467 aa22.41■■□□□ 1.18
ECHDC1-214ENST00000474289 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
ECHDC1-214ENST00000474289 DCTN1Q14203 1278 aa22.41■■□□□ 1.18
ECHDC1-214ENST00000474289 UBE2HP62256 183 aa22.4■■□□□ 1.18
ECHDC1-214ENST00000474289 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
ECHDC1-214ENST00000474289 FEZ1Q99689 392 aa22.4■■□□□ 1.18
ECHDC1-214ENST00000474289 TUBGCP6Q96RT7 1819 aa22.4■■□□□ 1.18
ECHDC1-214ENST00000474289 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
ECHDC1-214ENST00000474289 SPC24Q8NBT2 197 aa22.39■■□□□ 1.18
ECHDC1-214ENST00000474289 GIMAP6Q6P9H5 292 aa22.39■■□□□ 1.17
ECHDC1-214ENST00000474289 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 HMMRO75330 724 aa22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 IL13P35225 146 aa22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 IL17RAQ96F46 866 aa22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 TPM3P06753 285 aa22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 NCBP1Q09161 790 aaKnown RBP22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 BBXQ8WY36 941 aaPredicted RBP22.38■■□□□ 1.17
ECHDC1-214ENST00000474289 SALL3Q9BXA9 1300 aa22.37■■□□□ 1.17
ECHDC1-214ENST00000474289 CHMLP26374 656 aa22.37■■□□□ 1.17
ECHDC1-214ENST00000474289 GTF2E1P29083 439 aaPredicted RBP22.37■■□□□ 1.17
ECHDC1-214ENST00000474289 OGFRQ9NZT2 677 aa22.37■■□□□ 1.17
ECHDC1-214ENST00000474289 ZSCAN22P10073 491 aaPredicted RBP22.36■■□□□ 1.17
ECHDC1-214ENST00000474289 SSH2Q76I76 1423 aa22.36■■□□□ 1.17
ECHDC1-214ENST00000474289 FIBPO43427 364 aa22.35■■□□□ 1.17
ECHDC1-214ENST00000474289 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.35■■□□□ 1.17
ECHDC1-214ENST00000474289 SLC52A1Q9NWF4 448 aa22.35■■□□□ 1.17
ECHDC1-214ENST00000474289 KIAA0232Q92628 1395 aa22.35■■□□□ 1.17
ECHDC1-214ENST00000474289 ZNF771Q7L3S4 317 aaPredicted RBP22.35■■□□□ 1.17
ECHDC1-214ENST00000474289 EXOC6BQ9Y2D4 811 aa22.35■■□□□ 1.17
ECHDC1-214ENST00000474289 PTPRCP08575 1304 aa22.34■■□□□ 1.17
ECHDC1-214ENST00000474289 TAF3Q5VWG9 929 aa22.34■■□□□ 1.17
ECHDC1-214ENST00000474289 RILPL2Q969X0 211 aa22.34■■□□□ 1.17
ECHDC1-214ENST00000474289 GOLGA6L6A8MZA4 724 aa22.33■■□□□ 1.17
ECHDC1-214ENST00000474289 ZRANB1Q9UGI0 708 aa22.33■■□□□ 1.17
ECHDC1-214ENST00000474289 TMEM131LA2VDJ0 1609 aa22.33■■□□□ 1.17
ECHDC1-214ENST00000474289 TRIM6-TRIM34B2RNG4 842 aa22.33■■□□□ 1.17
ECHDC1-214ENST00000474289 CTNNA3Q9UI47 895 aa22.33■■□□□ 1.17
ECHDC1-214ENST00000474289 STX6O43752 255 aa22.32■■□□□ 1.16
ECHDC1-214ENST00000474289 WAPLQ7Z5K2 1190 aa22.32■■□□□ 1.16
ECHDC1-214ENST00000474289 CGNQ9P2M7 1197 aaKnown RBP22.32■■□□□ 1.16
ECHDC1-214ENST00000474289 SYT1P21579 422 aa22.31■■□□□ 1.16
ECHDC1-214ENST00000474289 PTGS1P23219 599 aa22.31■■□□□ 1.16
ECHDC1-214ENST00000474289 IL25Q9H293 177 aa22.31■■□□□ 1.16
ECHDC1-214ENST00000474289 NPM1P06748 294 aaKnown RBP eCLIP22.31■■□□□ 1.16
ECHDC1-214ENST00000474289 F13A1P00488 732 aa22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 HAP1P54257 671 aaPredicted RBP22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 NME9Q86XW9 330 aa22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 KLHL34Q8N239 644 aa22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 DIP2CQ9Y2E4 1556 aa22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 SYCP1Q15431 976 aa22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 ALKQ9UM73 1620 aa22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 CDK12Q9NYV4 1490 aaPredicted RBP22.3■■□□□ 1.16
ECHDC1-214ENST00000474289 HSPA4P34932 840 aa22.29■■□□□ 1.16
ECHDC1-214ENST00000474289 GABPB1Q06547 395 aaPredicted RBP22.29■■□□□ 1.16
ECHDC1-214ENST00000474289 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
ECHDC1-214ENST00000474289 TMEM51Q9NW97 253 aa22.29■■□□□ 1.16
ECHDC1-214ENST00000474289 LRRCC1Q9C099 1032 aa22.29■■□□□ 1.16
ECHDC1-214ENST00000474289 C16orf45Q96MC5 204 aaPredicted RBP22.28■■□□□ 1.16
ECHDC1-214ENST00000474289 FBXO31Q5XUX0 539 aaPredicted RBP22.28■■□□□ 1.16
ECHDC1-214ENST00000474289 DDX41Q9UJV9 622 aaKnown RBP22.28■■□□□ 1.16
ECHDC1-214ENST00000474289 SMTNL1A8MU46 457 aa22.27■■□□□ 1.16
ECHDC1-214ENST00000474289 CCDC192P0DO97 292 aa22.27■■□□□ 1.16
ECHDC1-214ENST00000474289 ATP6V1DQ9Y5K8 247 aa22.27■■□□□ 1.16
ECHDC1-214ENST00000474289 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
ECHDC1-214ENST00000474289 SLC4A10Q6U841 1118 aa22.27■■□□□ 1.16
ECHDC1-214ENST00000474289 SLC4A2P04920 1241 aa22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 NAA30Q147X3 362 aaPredicted RBP22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 LARP6Q9BRS8 491 aaKnown RBP22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 PREX1Q8TCU6 1659 aa22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 F6X3S4 739 aa22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 CHL1O00533 1208 aa22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 SLFN14P0C7P3 912 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms