RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FOXD4L5Q5VV16 416 aaPredicted RBP25.88■■□□□ 1.73
COL18A1-207ENST00000473212 FOXD4L4Q8WXT5 416 aaPredicted RBP25.88■■□□□ 1.73
COL18A1-207ENST00000473212 ARHGEF10O15013 1369 aa25.87■■□□□ 1.73
COL18A1-207ENST00000473212 ANP32BQ92688 251 aaKnown RBP25.87■■□□□ 1.73
COL18A1-207ENST00000473212 LTV1Q96GA3 475 aaPredicted RBP25.87■■□□□ 1.73
COL18A1-207ENST00000473212 ZNF445P59923 1031 aa25.86■■□□□ 1.73
COL18A1-207ENST00000473212 FKBP5Q13451 457 aaPredicted RBP25.86■■□□□ 1.73
COL18A1-207ENST00000473212 ZSCAN23Q3MJ62 389 aa25.86■■□□□ 1.73
COL18A1-207ENST00000473212 ERC2O15083 957 aa25.86■■□□□ 1.73
COL18A1-207ENST00000473212 ZDHHC9Q9Y397 364 aa25.86■■□□□ 1.73
COL18A1-207ENST00000473212 FLT4P35916 1363 aa25.85■■□□□ 1.73
COL18A1-207ENST00000473212 FLIIQ13045 1269 aa25.85■■□□□ 1.73
COL18A1-207ENST00000473212 PRPF40AO75400 957 aaKnown RBP25.84■■□□□ 1.73
COL18A1-207ENST00000473212 HMMRO75330 724 aa25.84■■□□□ 1.73
COL18A1-207ENST00000473212 NOL8Q76FK4 1167 aaKnown RBP25.84■■□□□ 1.73
COL18A1-207ENST00000473212 PLEKHG1Q9ULL1 1385 aa25.84■■□□□ 1.73
COL18A1-207ENST00000473212 FMN2Q9NZ56 1722 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 GNAI2P04899 355 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 CCT4P50991 539 aaKnown RBP25.83■■□□□ 1.73
COL18A1-207ENST00000473212 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 PALD1Q9ULE6 856 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 SBNO1A3KN83 1393 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 IGSF1Q8N6C5 1336 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 KDRP35968 1356 aa25.83■■□□□ 1.73
COL18A1-207ENST00000473212 NLRP6P59044 892 aa25.82■■□□□ 1.72
COL18A1-207ENST00000473212 STK31Q9BXU1 1019 aa25.82■■□□□ 1.72
COL18A1-207ENST00000473212 UNC5CLQ8IV45 518 aa25.81■■□□□ 1.72
COL18A1-207ENST00000473212 IL17REQ8NFR9 667 aa25.81■■□□□ 1.72
COL18A1-207ENST00000473212 GPT2Q8TD30 523 aa25.81■■□□□ 1.72
COL18A1-207ENST00000473212 SALL3Q9BXA9 1300 aa25.81■■□□□ 1.72
COL18A1-207ENST00000473212 RBM27Q9P2N5 1060 aaKnown RBP25.8■■□□□ 1.72
COL18A1-207ENST00000473212 LRRFIP2Q9Y608 721 aaKnown RBP25.8■■□□□ 1.72
COL18A1-207ENST00000473212 NEK4P51957 841 aa25.8■■□□□ 1.72
COL18A1-207ENST00000473212 ZSCAN30Q86W11 494 aa25.8■■□□□ 1.72
COL18A1-207ENST00000473212 OSBPL3Q9H4L5 887 aa25.8■■□□□ 1.72
COL18A1-207ENST00000473212 RILPL2Q969X0 211 aa25.79■■□□□ 1.72
COL18A1-207ENST00000473212 RBSNQ9H1K0 784 aa25.79■■□□□ 1.72
COL18A1-207ENST00000473212 IL25Q9H293 177 aa25.79■■□□□ 1.72
COL18A1-207ENST00000473212 IL1RAPL2Q9NP60 686 aa25.78■■□□□ 1.72
COL18A1-207ENST00000473212 PRIM1P49642 420 aaKnown RBP25.78■■□□□ 1.72
COL18A1-207ENST00000473212 TTC21AQ8NDW8 1320 aa25.78■■□□□ 1.72
COL18A1-207ENST00000473212 LRRCC1Q9C099 1032 aa25.77■■□□□ 1.72
COL18A1-207ENST00000473212 PHAXQ9H814 394 aaKnown RBP25.77■■□□□ 1.72
COL18A1-207ENST00000473212 PIK3C2AO00443 1686 aa25.77■■□□□ 1.72
COL18A1-207ENST00000473212 TRIM6-TRIM34B2RNG4 842 aa25.77■■□□□ 1.72
COL18A1-207ENST00000473212 MX1P20591 662 aa25.77■■□□□ 1.72
COL18A1-207ENST00000473212 NSFL1CQ9UNZ2 370 aaKnown RBP25.77■■□□□ 1.72
COL18A1-207ENST00000473212 ESYT1Q9BSJ8 1104 aa25.76■■□□□ 1.71
COL18A1-207ENST00000473212 GNAT3A8MTJ3 354 aa25.76■■□□□ 1.71
COL18A1-207ENST00000473212 HOXC9P31274 260 aa25.76■■□□□ 1.71
COL18A1-207ENST00000473212 HSP90AA2PQ14568 343 aaPredicted RBP25.76■■□□□ 1.71
COL18A1-207ENST00000473212 MAP4K4O95819 1239 aaPredicted RBP25.75■■□□□ 1.71
COL18A1-207ENST00000473212 TMX3Q96JJ7 454 aa25.75■■□□□ 1.71
COL18A1-207ENST00000473212 CCDC30Q5VVM6 783 aa25.74■■□□□ 1.71
COL18A1-207ENST00000473212 USP44Q9H0E7 712 aa25.74■■□□□ 1.71
COL18A1-207ENST00000473212 ANO2Q9NQ90 1003 aa25.74■■□□□ 1.71
COL18A1-207ENST00000473212 MSNP26038 577 aaKnown RBP25.74■■□□□ 1.71
COL18A1-207ENST00000473212 ATP8B2P98198 1209 aa25.74■■□□□ 1.71
COL18A1-207ENST00000473212 EID1Q9Y6B2 187 aa25.74■■□□□ 1.71
COL18A1-207ENST00000473212 RBM33Q96EV2 1170 aaKnown RBP25.73■■□□□ 1.71
COL18A1-207ENST00000473212 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
COL18A1-207ENST00000473212 NUTM1Q86Y26 1132 aa25.73■■□□□ 1.71
COL18A1-207ENST00000473212 UPF3BQ9BZI7 483 aaKnown RBP25.73■■□□□ 1.71
COL18A1-207ENST00000473212 CHMLP26374 656 aa25.72■■□□□ 1.71
COL18A1-207ENST00000473212 C14orf37Q86TY3 774 aa25.72■■□□□ 1.71
COL18A1-207ENST00000473212 XRN1Q8IZH2 1706 aaKnown RBP25.72■■□□□ 1.71
COL18A1-207ENST00000473212 TMEM63CQ9P1W3 806 aa25.72■■□□□ 1.71
COL18A1-207ENST00000473212 FAM208AQ9UK61 1670 aaKnown RBP25.71■■□□□ 1.71
COL18A1-207ENST00000473212 RRP9O43818 475 aaKnown RBP25.71■■□□□ 1.71
COL18A1-207ENST00000473212 FOXD4L6Q3SYB3 417 aaPredicted RBP25.71■■□□□ 1.71
COL18A1-207ENST00000473212 FOXD4L3Q6VB84 417 aaPredicted RBP25.71■■□□□ 1.71
COL18A1-207ENST00000473212 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.71
COL18A1-207ENST00000473212 KIAA1211Q6ZU35 1233 aa25.7■■□□□ 1.71
COL18A1-207ENST00000473212 TUBGCP6Q96RT7 1819 aa25.7■■□□□ 1.7
COL18A1-207ENST00000473212 NWD1Q149M9 1564 aa25.7■■□□□ 1.7
COL18A1-207ENST00000473212 GNAI3P08754 354 aa25.7■■□□□ 1.7
COL18A1-207ENST00000473212 SYCE3A1L190 88 aa25.69■■□□□ 1.7
COL18A1-207ENST00000473212 PLEKHG5O94827 1062 aa25.69■■□□□ 1.7
COL18A1-207ENST00000473212 ANXA1P04083 346 aa25.69■■□□□ 1.7
COL18A1-207ENST00000473212 EIF2S2P20042 333 aaKnown RBP25.69■■□□□ 1.7
COL18A1-207ENST00000473212 ABTB2Q8N961 1025 aa25.69■■□□□ 1.7
COL18A1-207ENST00000473212 KCNA6P17658 529 aa25.69■■□□□ 1.7
COL18A1-207ENST00000473212 TPM2P07951 284 aa25.68■■□□□ 1.7
COL18A1-207ENST00000473212 HDGFL1Q5TGJ6 251 aa25.68■■□□□ 1.7
COL18A1-207ENST00000473212 LRSAM1Q6UWE0 723 aa25.68■■□□□ 1.7
COL18A1-207ENST00000473212 PDLIM2Q96JY6 352 aa25.68■■□□□ 1.7
COL18A1-207ENST00000473212 MAP3K5Q99683 1374 aa25.67■■□□□ 1.7
COL18A1-207ENST00000473212 MCCP23508 829 aa25.67■■□□□ 1.7
COL18A1-207ENST00000473212 KCNQ3O43525 872 aa25.67■■□□□ 1.7
COL18A1-207ENST00000473212 MCM2P49736 904 aa25.67■■□□□ 1.7
COL18A1-207ENST00000473212 TAF7Q15545 349 aaPredicted RBP25.67■■□□□ 1.7
COL18A1-207ENST00000473212 LRRC37A3O60309 1634 aa25.67■■□□□ 1.7
COL18A1-207ENST00000473212 OFD1O75665 1012 aa25.66■■□□□ 1.7
COL18A1-207ENST00000473212 UBTFL1P0CB47 393 aaPredicted RBP25.66■■□□□ 1.7
COL18A1-207ENST00000473212 ZBTB7CA1YPR0 619 aa25.66■■□□□ 1.7
COL18A1-207ENST00000473212 LGR6Q9HBX8 967 aa25.66■■□□□ 1.7
COL18A1-207ENST00000473212 TBX22Q9Y458 520 aa25.66■■□□□ 1.7
COL18A1-207ENST00000473212 DTNBO60941 627 aa25.65■■□□□ 1.7
COL18A1-207ENST00000473212 BRD1O95696 1058 aa25.65■■□□□ 1.7
COL18A1-207ENST00000473212 CUL4AQ13619 759 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms