RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
SEC16A-209ENST00000472305 KCNQ3O43525 872 aa16.89■□□□□ 0.29
SEC16A-209ENST00000472305 TEFQ10587 303 aa16.89■□□□□ 0.29
SEC16A-209ENST00000472305 ATG3Q9NT62 314 aa16.89■□□□□ 0.29
SEC16A-209ENST00000472305 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
SEC16A-209ENST00000472305 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
SEC16A-209ENST00000472305 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
SEC16A-209ENST00000472305 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
SEC16A-209ENST00000472305 LMOD3Q0VAK6 560 aa16.88■□□□□ 0.29
SEC16A-209ENST00000472305 WWC1Q8IX03 1113 aa16.88■□□□□ 0.29
SEC16A-209ENST00000472305 MRC1P22897 1456 aa16.87■□□□□ 0.29
SEC16A-209ENST00000472305 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
SEC16A-209ENST00000472305 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
SEC16A-209ENST00000472305 BAG6P46379 1132 aa16.86■□□□□ 0.29
SEC16A-209ENST00000472305 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
SEC16A-209ENST00000472305 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
SEC16A-209ENST00000472305 ITGB4P16144 1822 aa16.86■□□□□ 0.29
SEC16A-209ENST00000472305 KCNQ4P56696 695 aa16.85■□□□□ 0.29
SEC16A-209ENST00000472305 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
SEC16A-209ENST00000472305 PROM2Q8N271 834 aa16.85■□□□□ 0.29
SEC16A-209ENST00000472305 LAS1LQ9Y4W2 734 aaKnown RBP16.85■□□□□ 0.29
SEC16A-209ENST00000472305 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEC16A-209ENST00000472305 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
SEC16A-209ENST00000472305 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
SEC16A-209ENST00000472305 CAMKK2Q96RR4 588 aa16.84■□□□□ 0.29
SEC16A-209ENST00000472305 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
SEC16A-209ENST00000472305 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
SEC16A-209ENST00000472305 BTAF1O14981 1849 aa16.84■□□□□ 0.29
SEC16A-209ENST00000472305 PALLDQ8WX93 1383 aa16.83■□□□□ 0.28
SEC16A-209ENST00000472305 ZNF521Q96K83 1311 aa16.83■□□□□ 0.28
SEC16A-209ENST00000472305 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
SEC16A-209ENST00000472305 CHL1O00533 1208 aa16.82■□□□□ 0.28
SEC16A-209ENST00000472305 PLSCR1O15162 318 aa16.82■□□□□ 0.28
SEC16A-209ENST00000472305 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
SEC16A-209ENST00000472305 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
SEC16A-209ENST00000472305 ZNF790Q6PG37 636 aa16.81■□□□□ 0.28
SEC16A-209ENST00000472305 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
SEC16A-209ENST00000472305 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
SEC16A-209ENST00000472305 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
SEC16A-209ENST00000472305 SIPA1L3O60292 1781 aaPredicted RBP16.8■□□□□ 0.28
SEC16A-209ENST00000472305 TXNRD1Q16881 649 aa16.8■□□□□ 0.28
SEC16A-209ENST00000472305 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
SEC16A-209ENST00000472305 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
SEC16A-209ENST00000472305 ZNF496Q96IT1 587 aaPredicted RBP16.8■□□□□ 0.28
SEC16A-209ENST00000472305 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
SEC16A-209ENST00000472305 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 SIK1P57059 783 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 ITPK1Q13572 414 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 R3HDM1Q15032 1099 aaKnown RBP16.79■□□□□ 0.28
SEC16A-209ENST00000472305 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 TSR2Q969E8 191 aaKnown RBP16.79■□□□□ 0.28
SEC16A-209ENST00000472305 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 IFT57Q9NWB7 429 aa16.79■□□□□ 0.28
SEC16A-209ENST00000472305 EIF4A1P60842 406 aaKnown RBP16.78■□□□□ 0.28
SEC16A-209ENST00000472305 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
SEC16A-209ENST00000472305 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
SEC16A-209ENST00000472305 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
SEC16A-209ENST00000472305 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
SEC16A-209ENST00000472305 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
SEC16A-209ENST00000472305 ATP6V1AP38606 617 aa16.77■□□□□ 0.28
SEC16A-209ENST00000472305 GNAI1P63096 354 aa16.77■□□□□ 0.28
SEC16A-209ENST00000472305 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
SEC16A-209ENST00000472305 PAPPAQ13219 1627 aa16.77■□□□□ 0.27
SEC16A-209ENST00000472305 IL16Q14005 1332 aa16.76■□□□□ 0.27
SEC16A-209ENST00000472305 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
SEC16A-209ENST00000472305 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
SEC16A-209ENST00000472305 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
SEC16A-209ENST00000472305 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
SEC16A-209ENST00000472305 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
SEC16A-209ENST00000472305 GOLGA2Q08379 1002 aa16.74■□□□□ 0.27
SEC16A-209ENST00000472305 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
SEC16A-209ENST00000472305 HEG1Q9ULI3 1381 aa16.74■□□□□ 0.27
SEC16A-209ENST00000472305 FANCIQ9NVI1 1328 aa16.73■□□□□ 0.27
SEC16A-209ENST00000472305 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
SEC16A-209ENST00000472305 SLC27A3Q5K4L6 730 aa16.73■□□□□ 0.27
SEC16A-209ENST00000472305 C8orf58Q8NAV2 365 aa16.73■□□□□ 0.27
SEC16A-209ENST00000472305 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
SEC16A-209ENST00000472305 LY75O60449 1722 aa16.73■□□□□ 0.27
SEC16A-209ENST00000472305 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-209ENST00000472305 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-209ENST00000472305 SMIM5Q71RC9 77 aa16.72■□□□□ 0.27
SEC16A-209ENST00000472305 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
SEC16A-209ENST00000472305 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-209ENST00000472305 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
SEC16A-209ENST00000472305 ZNF827Q17R98 1081 aa16.71■□□□□ 0.27
SEC16A-209ENST00000472305 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
SEC16A-209ENST00000472305 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
SEC16A-209ENST00000472305 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
SEC16A-209ENST00000472305 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
SEC16A-209ENST00000472305 EXOSC9Q06265 439 aaKnown RBP16.7■□□□□ 0.26
SEC16A-209ENST00000472305 TRMT2AQ8IZ69 625 aaKnown RBP16.7■□□□□ 0.26
SEC16A-209ENST00000472305 E9PSI1 815 aa16.69■□□□□ 0.26
SEC16A-209ENST00000472305 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
SEC16A-209ENST00000472305 DUSP27Q5VZP5 1158 aa16.69■□□□□ 0.26
SEC16A-209ENST00000472305 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
SEC16A-209ENST00000472305 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
SEC16A-209ENST00000472305 TJP1Q07157 1748 aa16.68■□□□□ 0.26
SEC16A-209ENST00000472305 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms