RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
SMC4-213ENST00000472282 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
SMC4-213ENST00000472282 APBA3O96018 575 aa12.75□□□□□ -0.37
SMC4-213ENST00000472282 ERBB3P21860 1342 aa12.75□□□□□ -0.37
SMC4-213ENST00000472282 OVOS2A0A0G2JMS6 1433 aa12.74□□□□□ -0.37
SMC4-213ENST00000472282 PTF1AQ7RTS3 328 aa12.74□□□□□ -0.37
SMC4-213ENST00000472282 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
SMC4-213ENST00000472282 FAM208AQ9UK61 1670 aaKnown RBP12.73□□□□□ -0.37
SMC4-213ENST00000472282 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
SMC4-213ENST00000472282 DDB1Q16531 1140 aa12.73□□□□□ -0.37
SMC4-213ENST00000472282 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
SMC4-213ENST00000472282 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
SMC4-213ENST00000472282 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
SMC4-213ENST00000472282 TMF1P82094 1093 aa12.72□□□□□ -0.37
SMC4-213ENST00000472282 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
SMC4-213ENST00000472282 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
SMC4-213ENST00000472282 CARD10Q9BWT7 1032 aa12.72□□□□□ -0.37
SMC4-213ENST00000472282 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
SMC4-213ENST00000472282 NHSQ6T4R5 1651 aa12.71□□□□□ -0.37
SMC4-213ENST00000472282 FBLN1P23142 703 aa12.71□□□□□ -0.37
SMC4-213ENST00000472282 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
SMC4-213ENST00000472282 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
SMC4-213ENST00000472282 KAT6BQ8WYB5 2073 aa12.7□□□□□ -0.38
SMC4-213ENST00000472282 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
SMC4-213ENST00000472282 TNS2Q63HR2 1409 aa12.7□□□□□ -0.38
SMC4-213ENST00000472282 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
SMC4-213ENST00000472282 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
SMC4-213ENST00000472282 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
SMC4-213ENST00000472282 NINLQ9Y2I6 1382 aa12.69□□□□□ -0.38
SMC4-213ENST00000472282 BTAF1O14981 1849 aa12.69□□□□□ -0.38
SMC4-213ENST00000472282 ANKRD24Q8TF21 1146 aa12.68□□□□□ -0.38
SMC4-213ENST00000472282 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
SMC4-213ENST00000472282 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
SMC4-213ENST00000472282 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
SMC4-213ENST00000472282 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
SMC4-213ENST00000472282 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
SMC4-213ENST00000472282 BCL9O00512 1426 aa12.67□□□□□ -0.38
SMC4-213ENST00000472282 MAP3K19Q56UN5 1328 aa12.66□□□□□ -0.38
SMC4-213ENST00000472282 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
SMC4-213ENST00000472282 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
SMC4-213ENST00000472282 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
SMC4-213ENST00000472282 EXOC5O00471 708 aa12.65□□□□□ -0.38
SMC4-213ENST00000472282 IP6K1Q92551 441 aa12.65□□□□□ -0.38
SMC4-213ENST00000472282 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
SMC4-213ENST00000472282 POLR3GLQ9BT43 218 aa12.65□□□□□ -0.38
SMC4-213ENST00000472282 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
SMC4-213ENST00000472282 FYB1O15117 783 aa12.64□□□□□ -0.39
SMC4-213ENST00000472282 RGL2O15211 777 aa12.64□□□□□ -0.39
SMC4-213ENST00000472282 KCNQ2O43526 872 aa12.64□□□□□ -0.39
SMC4-213ENST00000472282 COG3Q96JB2 828 aa12.64□□□□□ -0.39
SMC4-213ENST00000472282 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
SMC4-213ENST00000472282 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
SMC4-213ENST00000472282 C11orf95C9JLR9 678 aaPredicted RBP12.63□□□□□ -0.39
SMC4-213ENST00000472282 PLSCR1O15162 318 aa12.63□□□□□ -0.39
SMC4-213ENST00000472282 IL2RBP14784 551 aa12.63□□□□□ -0.39
SMC4-213ENST00000472282 HOXC9P31274 260 aa12.63□□□□□ -0.39
SMC4-213ENST00000472282 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
SMC4-213ENST00000472282 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
SMC4-213ENST00000472282 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
SMC4-213ENST00000472282 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
SMC4-213ENST00000472282 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
SMC4-213ENST00000472282 MEGF6O75095 1541 aa12.62□□□□□ -0.39
SMC4-213ENST00000472282 KIF7Q2M1P5 1343 aa12.62□□□□□ -0.39
SMC4-213ENST00000472282 TUBGCP6Q96RT7 1819 aa12.61□□□□□ -0.39
SMC4-213ENST00000472282 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
SMC4-213ENST00000472282 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
SMC4-213ENST00000472282 SRCAPQ6ZRS2 3230 aa12.61□□□□□ -0.39
SMC4-213ENST00000472282 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
SMC4-213ENST00000472282 LY75O60449 1722 aa12.6□□□□□ -0.39
SMC4-213ENST00000472282 AMPHP49418 695 aa12.6□□□□□ -0.39
SMC4-213ENST00000472282 NBPF14Q5TI25 921 aa12.6□□□□□ -0.39
SMC4-213ENST00000472282 TXNRD1Q16881 649 aa12.59□□□□□ -0.39
SMC4-213ENST00000472282 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 ITGB4P16144 1822 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 USHBP1Q8N6Y0 703 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 TOGARAM1Q9Y4F4 1720 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
SMC4-213ENST00000472282 PKD1L3Q7Z443 1732 aa12.57□□□□□ -0.4
SMC4-213ENST00000472282 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
SMC4-213ENST00000472282 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
SMC4-213ENST00000472282 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
SMC4-213ENST00000472282 ARSIQ5FYB1 569 aa12.56□□□□□ -0.4
SMC4-213ENST00000472282 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
SMC4-213ENST00000472282 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
SMC4-213ENST00000472282 NSD2O96028 1365 aa12.55□□□□□ -0.4
SMC4-213ENST00000472282 INSRP06213 1382 aa12.55□□□□□ -0.4
SMC4-213ENST00000472282 FLT4P35916 1363 aa12.55□□□□□ -0.4
SMC4-213ENST00000472282 TAF1LQ8IZX4 1826 aa12.54□□□□□ -0.4
SMC4-213ENST00000472282 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
SMC4-213ENST00000472282 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
SMC4-213ENST00000472282 SLC15A2Q16348 729 aa12.53□□□□□ -0.4
SMC4-213ENST00000472282 PANK3Q9H999 370 aa12.53□□□□□ -0.4
SMC4-213ENST00000472282 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
SMC4-213ENST00000472282 COL24A1Q17RW2 1714 aa12.53□□□□□ -0.4
SMC4-213ENST00000472282 SMG6Q86US8 1419 aaKnown RBP12.53□□□□□ -0.4
SMC4-213ENST00000472282 KIF3CO14782 793 aa12.52□□□□□ -0.41
SMC4-213ENST00000472282 ZBTB7AO95365 584 aa12.52□□□□□ -0.41
SMC4-213ENST00000472282 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms