RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
SYN3-211ENST00000472027 MTFR1LQ9H019 292 aa12.22□□□□□ -0.45
SYN3-211ENST00000472027 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
SYN3-211ENST00000472027 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
SYN3-211ENST00000472027 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.45
SYN3-211ENST00000472027 ITPK1Q13572 414 aa12.21□□□□□ -0.45
SYN3-211ENST00000472027 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
SYN3-211ENST00000472027 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
SYN3-211ENST00000472027 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.45
SYN3-211ENST00000472027 CASZ1Q86V15 1759 aa12.2□□□□□ -0.46
SYN3-211ENST00000472027 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
SYN3-211ENST00000472027 MSH5O43196 834 aa12.2□□□□□ -0.46
SYN3-211ENST00000472027 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
SYN3-211ENST00000472027 PTGER2P43116 358 aa12.2□□□□□ -0.46
SYN3-211ENST00000472027 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
SYN3-211ENST00000472027 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
SYN3-211ENST00000472027 AK7Q96M32 723 aa12.2□□□□□ -0.46
SYN3-211ENST00000472027 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
SYN3-211ENST00000472027 PRKRIP1Q9H875 184 aaPredicted RBP12.19□□□□□ -0.46
SYN3-211ENST00000472027 PPP1R1BQ9UD71 204 aaPredicted RBP12.19□□□□□ -0.46
SYN3-211ENST00000472027 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
SYN3-211ENST00000472027 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
SYN3-211ENST00000472027 FLAD1Q8NFF5 587 aa12.18□□□□□ -0.46
SYN3-211ENST00000472027 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
SYN3-211ENST00000472027 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
SYN3-211ENST00000472027 NEFMP07197 916 aa12.17□□□□□ -0.46
SYN3-211ENST00000472027 TEFQ10587 303 aa12.17□□□□□ -0.46
SYN3-211ENST00000472027 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
SYN3-211ENST00000472027 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
SYN3-211ENST00000472027 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
SYN3-211ENST00000472027 SCN11AQ9UI33 1791 aa12.17□□□□□ -0.46
SYN3-211ENST00000472027 C5P01031 1676 aa12.16□□□□□ -0.46
SYN3-211ENST00000472027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
SYN3-211ENST00000472027 PHF14O94880 888 aa12.16□□□□□ -0.46
SYN3-211ENST00000472027 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
SYN3-211ENST00000472027 MRC1P22897 1456 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 GNPATO15228 680 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
SYN3-211ENST00000472027 SSFA2P28290 1259 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
SYN3-211ENST00000472027 MCM10Q7L590 875 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 ARXQ96QS3 562 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 CEMIPQ8WUJ3 1361 aa12.15□□□□□ -0.46
SYN3-211ENST00000472027 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
SYN3-211ENST00000472027 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
SYN3-211ENST00000472027 POLD1P28340 1107 aa12.14□□□□□ -0.47
SYN3-211ENST00000472027 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
SYN3-211ENST00000472027 TRAPPC3LQ5T215 181 aa12.14□□□□□ -0.47
SYN3-211ENST00000472027 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
SYN3-211ENST00000472027 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
SYN3-211ENST00000472027 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 RPS6KA4O75676 772 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 TUBGCP6Q96RT7 1819 aa12.13□□□□□ -0.47
SYN3-211ENST00000472027 MAPK8IP3Q9UPT6 1336 aa12.12□□□□□ -0.47
SYN3-211ENST00000472027 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
SYN3-211ENST00000472027 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
SYN3-211ENST00000472027 FHDC1Q9C0D6 1143 aaPredicted RBP12.12□□□□□ -0.47
SYN3-211ENST00000472027 ZNF831Q5JPB2 1677 aa12.12□□□□□ -0.47
SYN3-211ENST00000472027 KCNQ3O43525 872 aa12.11□□□□□ -0.47
SYN3-211ENST00000472027 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
SYN3-211ENST00000472027 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
SYN3-211ENST00000472027 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
SYN3-211ENST00000472027 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
SYN3-211ENST00000472027 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
SYN3-211ENST00000472027 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
SYN3-211ENST00000472027 ADRA2BP18089 450 aa12.1□□□□□ -0.47
SYN3-211ENST00000472027 RFC4P35249 363 aa12.1□□□□□ -0.47
SYN3-211ENST00000472027 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
SYN3-211ENST00000472027 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
SYN3-211ENST00000472027 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
SYN3-211ENST00000472027 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
SYN3-211ENST00000472027 KCPQ6ZWJ8 1503 aa12.1□□□□□ -0.47
SYN3-211ENST00000472027 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
SYN3-211ENST00000472027 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
SYN3-211ENST00000472027 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
SYN3-211ENST00000472027 RIPK4P57078 832 aa12.09□□□□□ -0.47
SYN3-211ENST00000472027 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
SYN3-211ENST00000472027 HEG1Q9ULI3 1381 aa12.08□□□□□ -0.48
SYN3-211ENST00000472027 ANP32CO43423 234 aa12.08□□□□□ -0.48
SYN3-211ENST00000472027 STARD3NLO95772 234 aa12.08□□□□□ -0.48
SYN3-211ENST00000472027 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
SYN3-211ENST00000472027 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
SYN3-211ENST00000472027 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
SYN3-211ENST00000472027 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
SYN3-211ENST00000472027 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
SYN3-211ENST00000472027 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
SYN3-211ENST00000472027 TJP1Q07157 1748 aa12.07□□□□□ -0.48
SYN3-211ENST00000472027 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
SYN3-211ENST00000472027 CCDC184Q52MB2 194 aa12.07□□□□□ -0.48
SYN3-211ENST00000472027 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
SYN3-211ENST00000472027 PNISRQ8TF01 805 aaKnown RBP12.07□□□□□ -0.48
SYN3-211ENST00000472027 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms