RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
VPS72-204ENST00000471423 PSDA5PKW4 1024 aaPredicted RBP23.49■■□□□ 1.35
VPS72-204ENST00000471423 R3HDM1Q15032 1099 aaKnown RBP23.49■■□□□ 1.35
VPS72-204ENST00000471423 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
VPS72-204ENST00000471423 IL17REQ8NFR9 667 aa23.49■■□□□ 1.35
VPS72-204ENST00000471423 MRS2Q9HD23 443 aa23.48■■□□□ 1.35
VPS72-204ENST00000471423 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
VPS72-204ENST00000471423 NFE2L2Q16236 605 aa23.47■■□□□ 1.35
VPS72-204ENST00000471423 CEMIPQ8WUJ3 1361 aa23.47■■□□□ 1.35
VPS72-204ENST00000471423 C5P01031 1676 aa23.46■■□□□ 1.35
VPS72-204ENST00000471423 RTF1Q92541 710 aaKnown RBP23.46■■□□□ 1.35
VPS72-204ENST00000471423 SIPA1L3O60292 1781 aaPredicted RBP23.45■■□□□ 1.34
VPS72-204ENST00000471423 TEFQ10587 303 aa23.45■■□□□ 1.34
VPS72-204ENST00000471423 MCM10Q7L590 875 aa23.45■■□□□ 1.34
VPS72-204ENST00000471423 LOC102724428A0A0B4J2F2 783 aa23.44■■□□□ 1.34
VPS72-204ENST00000471423 SIK1P57059 783 aa23.44■■□□□ 1.34
VPS72-204ENST00000471423 DCTN1Q14203 1278 aa23.44■■□□□ 1.34
VPS72-204ENST00000471423 STK32BQ9NY57 414 aa23.44■■□□□ 1.34
VPS72-204ENST00000471423 TAF1LQ8IZX4 1826 aa23.43■■□□□ 1.34
VPS72-204ENST00000471423 HTATSF1O43719 755 aaKnown RBP23.43■■□□□ 1.34
VPS72-204ENST00000471423 ZNF827Q17R98 1081 aa23.43■■□□□ 1.34
VPS72-204ENST00000471423 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
VPS72-204ENST00000471423 RBM42Q9BTD8 480 aaKnown RBP23.42■■□□□ 1.34
VPS72-204ENST00000471423 SLC39A6Q13433 755 aa23.41■■□□□ 1.34
VPS72-204ENST00000471423 SLC15A2Q16348 729 aa23.41■■□□□ 1.34
VPS72-204ENST00000471423 PTCD1O75127 700 aaKnown RBP23.4■■□□□ 1.34
VPS72-204ENST00000471423 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
VPS72-204ENST00000471423 PNISRQ8TF01 805 aaKnown RBP23.4■■□□□ 1.34
VPS72-204ENST00000471423 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
VPS72-204ENST00000471423 RRP7AQ9Y3A4 280 aaKnown RBP23.4■■□□□ 1.34
VPS72-204ENST00000471423 KCPQ6ZWJ8 1503 aa23.39■■□□□ 1.34
VPS72-204ENST00000471423 ZNF831Q5JPB2 1677 aa23.39■■□□□ 1.34
VPS72-204ENST00000471423 ATP6V1AP38606 617 aa23.39■■□□□ 1.33
VPS72-204ENST00000471423 RIPK4P57078 832 aa23.39■■□□□ 1.33
VPS72-204ENST00000471423 SLC4A9Q96Q91 983 aa23.39■■□□□ 1.33
VPS72-204ENST00000471423 C4BP0C0L5 1744 aa23.39■■□□□ 1.33
VPS72-204ENST00000471423 UBR2Q8IWV8 1755 aa23.38■■□□□ 1.33
VPS72-204ENST00000471423 ITPK1Q13572 414 aa23.38■■□□□ 1.33
VPS72-204ENST00000471423 TUBGCP6Q96RT7 1819 aa23.38■■□□□ 1.33
VPS72-204ENST00000471423 LINC00116Q8NCU8 138 aa23.37■■□□□ 1.33
VPS72-204ENST00000471423 THUMPD2Q9BTF0 503 aaKnown RBP23.37■■□□□ 1.33
VPS72-204ENST00000471423 TJP1Q07157 1748 aa23.36■■□□□ 1.33
VPS72-204ENST00000471423 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
VPS72-204ENST00000471423 CASZ1Q86V15 1759 aa23.36■■□□□ 1.33
VPS72-204ENST00000471423 CICQ96RK0 1608 aaPredicted RBP23.36■■□□□ 1.33
VPS72-204ENST00000471423 COL5A3P25940 1745 aaPredicted RBP23.36■■□□□ 1.33
VPS72-204ENST00000471423 BTBD11A6QL63 1104 aa23.35■■□□□ 1.33
VPS72-204ENST00000471423 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
VPS72-204ENST00000471423 TTC5Q8N0Z6 440 aa23.35■■□□□ 1.33
VPS72-204ENST00000471423 QSER1Q2KHR3 1735 aa23.34■■□□□ 1.33
VPS72-204ENST00000471423 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
VPS72-204ENST00000471423 ZNF790Q6PG37 636 aa23.34■■□□□ 1.33
VPS72-204ENST00000471423 TFCP2L1Q9NZI6 479 aa23.34■■□□□ 1.33
VPS72-204ENST00000471423 APAF1O14727 1248 aa23.33■■□□□ 1.33
VPS72-204ENST00000471423 HMGB2P26583 209 aaKnown RBP23.33■■□□□ 1.33
VPS72-204ENST00000471423 PDGFDQ9GZP0 370 aaPredicted RBP23.33■■□□□ 1.33
VPS72-204ENST00000471423 AK7Q96M32 723 aa23.32■■□□□ 1.32
VPS72-204ENST00000471423 PNPLA7Q6ZV29 1317 aa23.32■■□□□ 1.32
VPS72-204ENST00000471423 KCNQ3O43525 872 aa23.31■■□□□ 1.32
VPS72-204ENST00000471423 TAF7Q15545 349 aaPredicted RBP23.31■■□□□ 1.32
VPS72-204ENST00000471423 FAM9BQ8IZU0 186 aa23.3■■□□□ 1.32
VPS72-204ENST00000471423 ZNF496Q96IT1 587 aaPredicted RBP23.3■■□□□ 1.32
VPS72-204ENST00000471423 TRIM35Q9UPQ4 493 aa23.3■■□□□ 1.32
VPS72-204ENST00000471423 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
VPS72-204ENST00000471423 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
VPS72-204ENST00000471423 SRCAPQ6ZRS2 3230 aa23.29■■□□□ 1.32
VPS72-204ENST00000471423 DNAJC10Q8IXB1 793 aa23.28■■□□□ 1.32
VPS72-204ENST00000471423 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
VPS72-204ENST00000471423 HEG1Q9ULI3 1381 aa23.27■■□□□ 1.32
VPS72-204ENST00000471423 GNPATO15228 680 aa23.27■■□□□ 1.32
VPS72-204ENST00000471423 AMIGO3Q86WK7 504 aa23.27■■□□□ 1.32
VPS72-204ENST00000471423 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
VPS72-204ENST00000471423 FMNL2Q96PY5 1086 aa23.27■■□□□ 1.32
VPS72-204ENST00000471423 CNTNAP4Q9C0A0 1308 aa23.27■■□□□ 1.32
VPS72-204ENST00000471423 SENP3-EIF4A1A0A087X0R7 540 aa23.26■■□□□ 1.31
VPS72-204ENST00000471423 PHF14O94880 888 aa23.26■■□□□ 1.31
VPS72-204ENST00000471423 SMIM5Q71RC9 77 aa23.26■■□□□ 1.31
VPS72-204ENST00000471423 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
VPS72-204ENST00000471423 CRKLP46109 303 aaKnown RBP23.25■■□□□ 1.31
VPS72-204ENST00000471423 LRP5O75197 1615 aa23.25■■□□□ 1.31
VPS72-204ENST00000471423 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
VPS72-204ENST00000471423 ZBTB7AO95365 584 aa23.24■■□□□ 1.31
VPS72-204ENST00000471423 RC3H1Q5TC82 1133 aaKnown RBP23.24■■□□□ 1.31
VPS72-204ENST00000471423 COL23A1Q86Y22 540 aaPredicted RBP23.24■■□□□ 1.31
VPS72-204ENST00000471423 MSH5O43196 834 aa23.23■■□□□ 1.31
VPS72-204ENST00000471423 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
VPS72-204ENST00000471423 SSFA2P28290 1259 aa23.23■■□□□ 1.31
VPS72-204ENST00000471423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.22■■□□□ 1.31
VPS72-204ENST00000471423 FLAD1Q8NFF5 587 aa23.22■■□□□ 1.31
VPS72-204ENST00000471423 TSPYL4Q9UJ04 414 aa23.22■■□□□ 1.31
VPS72-204ENST00000471423 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
VPS72-204ENST00000471423 RTCBQ9Y3I0 505 aaKnown RBP23.21■■□□□ 1.31
VPS72-204ENST00000471423 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
VPS72-204ENST00000471423 MIER1Q8N108 512 aa23.2■■□□□ 1.3
VPS72-204ENST00000471423 MTFR1LQ9H019 292 aa23.2■■□□□ 1.3
VPS72-204ENST00000471423 ATF5Q9Y2D1 282 aaPredicted RBP23.2■■□□□ 1.3
VPS72-204ENST00000471423 PRAMEF22A3QJZ6 481 aa23.19■■□□□ 1.3
VPS72-204ENST00000471423 RPS6KA4O75676 772 aa23.19■■□□□ 1.3
VPS72-204ENST00000471423 STARD3NLO95772 234 aa23.19■■□□□ 1.3
VPS72-204ENST00000471423 SPON1Q9HCB6 807 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms