RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 ITGB4P16144 1822 aa10.32□□□□□ -0.76
TRIM59-204ENST00000471396 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
TRIM59-204ENST00000471396 PHKG2P15735 406 aa10.31□□□□□ -0.76
TRIM59-204ENST00000471396 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
TRIM59-204ENST00000471396 PLEKHO1Q53GL0 409 aaPredicted RBP10.31□□□□□ -0.76
TRIM59-204ENST00000471396 NBPF14Q5TI25 921 aa10.31□□□□□ -0.76
TRIM59-204ENST00000471396 PAPPAQ13219 1627 aa10.31□□□□□ -0.76
TRIM59-204ENST00000471396 LY75O60449 1722 aa10.3□□□□□ -0.76
TRIM59-204ENST00000471396 HMOX1P09601 288 aa10.3□□□□□ -0.76
TRIM59-204ENST00000471396 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
TRIM59-204ENST00000471396 ZNF530Q6P9A1 599 aaPredicted RBP10.3□□□□□ -0.76
TRIM59-204ENST00000471396 U2SURPO15042 1029 aaKnown RBP10.29□□□□□ -0.76
TRIM59-204ENST00000471396 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
TRIM59-204ENST00000471396 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
TRIM59-204ENST00000471396 C1orf141Q5JVX7 400 aa10.29□□□□□ -0.76
TRIM59-204ENST00000471396 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
TRIM59-204ENST00000471396 KDM6AO15550 1401 aaPredicted RBP10.28□□□□□ -0.76
TRIM59-204ENST00000471396 SLC27A3Q5K4L6 730 aa10.28□□□□□ -0.76
TRIM59-204ENST00000471396 MPRIPQ6WCQ1 1025 aa10.28□□□□□ -0.76
TRIM59-204ENST00000471396 NUDCQ9Y266 331 aa10.28□□□□□ -0.76
TRIM59-204ENST00000471396 LRP5O75197 1615 aa10.28□□□□□ -0.76
TRIM59-204ENST00000471396 PALLDQ8WX93 1383 aa10.27□□□□□ -0.76
TRIM59-204ENST00000471396 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
TRIM59-204ENST00000471396 RALBP1Q15311 655 aa10.27□□□□□ -0.77
TRIM59-204ENST00000471396 PIGBQ92521 554 aa10.27□□□□□ -0.77
TRIM59-204ENST00000471396 DCAF5Q96JK2 942 aa10.27□□□□□ -0.77
TRIM59-204ENST00000471396 STK32BQ9NY57 414 aa10.27□□□□□ -0.77
TRIM59-204ENST00000471396 TMOD3Q9NYL9 352 aa10.27□□□□□ -0.77
TRIM59-204ENST00000471396 SCN11AQ9UI33 1791 aa10.26□□□□□ -0.77
TRIM59-204ENST00000471396 ERVV-2B6SEH9 535 aa10.26□□□□□ -0.77
TRIM59-204ENST00000471396 AKAP4Q5JQC9 854 aa10.26□□□□□ -0.77
TRIM59-204ENST00000471396 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
TRIM59-204ENST00000471396 LRRC4BQ9NT99 713 aa10.26□□□□□ -0.77
TRIM59-204ENST00000471396 CCNL1Q9UK58 526 aaPredicted RBP10.26□□□□□ -0.77
TRIM59-204ENST00000471396 CASZ1Q86V15 1759 aa10.26□□□□□ -0.77
TRIM59-204ENST00000471396 ADAMTS7Q9UKP4 1686 aa10.25□□□□□ -0.77
TRIM59-204ENST00000471396 MRC1P22897 1456 aa10.25□□□□□ -0.77
TRIM59-204ENST00000471396 U2AF1L5P0DN76 240 aaPredicted RBP10.25□□□□□ -0.77
TRIM59-204ENST00000471396 U2AF1Q01081 240 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIM59-204ENST00000471396 SLC15A2Q16348 729 aa10.25□□□□□ -0.77
TRIM59-204ENST00000471396 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
TRIM59-204ENST00000471396 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
TRIM59-204ENST00000471396 C5P01031 1676 aa10.25□□□□□ -0.77
TRIM59-204ENST00000471396 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
TRIM59-204ENST00000471396 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
TRIM59-204ENST00000471396 PRKAR2BP31323 418 aa10.24□□□□□ -0.77
TRIM59-204ENST00000471396 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
TRIM59-204ENST00000471396 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
TRIM59-204ENST00000471396 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
TRIM59-204ENST00000471396 MAP3K5Q99683 1374 aa10.24□□□□□ -0.77
TRIM59-204ENST00000471396 QSER1Q2KHR3 1735 aa10.24□□□□□ -0.77
TRIM59-204ENST00000471396 TAF1LQ8IZX4 1826 aa10.23□□□□□ -0.77
TRIM59-204ENST00000471396 TUBGCP6Q96RT7 1819 aa10.23□□□□□ -0.77
TRIM59-204ENST00000471396 HMGB2P26583 209 aaKnown RBP10.23□□□□□ -0.77
TRIM59-204ENST00000471396 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
TRIM59-204ENST00000471396 KCNQ4P56696 695 aa10.23□□□□□ -0.77
TRIM59-204ENST00000471396 CABP4P57796 275 aa10.23□□□□□ -0.77
TRIM59-204ENST00000471396 ZNF827Q17R98 1081 aa10.23□□□□□ -0.77
TRIM59-204ENST00000471396 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
TRIM59-204ENST00000471396 LOC102724428A0A0B4J2F2 783 aa10.22□□□□□ -0.77
TRIM59-204ENST00000471396 FCHSD2O94868 740 aa10.22□□□□□ -0.77
TRIM59-204ENST00000471396 SIK1P57059 783 aa10.22□□□□□ -0.77
TRIM59-204ENST00000471396 ATG3Q9NT62 314 aa10.22□□□□□ -0.77
TRIM59-204ENST00000471396 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
TRIM59-204ENST00000471396 ZNF831Q5JPB2 1677 aa10.22□□□□□ -0.77
TRIM59-204ENST00000471396 RNMTO43148 476 aaKnown RBP10.21□□□□□ -0.77
TRIM59-204ENST00000471396 ECM2O94769 699 aaPredicted RBP10.21□□□□□ -0.77
TRIM59-204ENST00000471396 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.77
TRIM59-204ENST00000471396 C4BP0C0L5 1744 aa10.21□□□□□ -0.78
TRIM59-204ENST00000471396 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
TRIM59-204ENST00000471396 NUBP1P53384 320 aa10.2□□□□□ -0.78
TRIM59-204ENST00000471396 NFATC2IPQ8NCF5 419 aa10.2□□□□□ -0.78
TRIM59-204ENST00000471396 PHACTR3Q96KR7 559 aa10.2□□□□□ -0.78
TRIM59-204ENST00000471396 PDGFDQ9GZP0 370 aaPredicted RBP10.2□□□□□ -0.78
TRIM59-204ENST00000471396 SLC52A2Q9HAB3 445 aa10.2□□□□□ -0.78
TRIM59-204ENST00000471396 LGR6Q9HBX8 967 aa10.2□□□□□ -0.78
TRIM59-204ENST00000471396 CICQ96RK0 1608 aaPredicted RBP10.19□□□□□ -0.78
TRIM59-204ENST00000471396 PNPLA7Q6ZV29 1317 aa10.19□□□□□ -0.78
TRIM59-204ENST00000471396 EVX2Q03828 476 aa10.19□□□□□ -0.78
TRIM59-204ENST00000471396 SPON1Q9HCB6 807 aa10.19□□□□□ -0.78
TRIM59-204ENST00000471396 TFCP2L1Q9NZI6 479 aa10.19□□□□□ -0.78
TRIM59-204ENST00000471396 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
TRIM59-204ENST00000471396 SIPA1L3O60292 1781 aaPredicted RBP10.19□□□□□ -0.78
TRIM59-204ENST00000471396 COL5A3P25940 1745 aaPredicted RBP10.19□□□□□ -0.78
TRIM59-204ENST00000471396 CEMIPQ8WUJ3 1361 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 ZBTB7AO95365 584 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 NEFMP07197 916 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 ITPK1Q13572 414 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 LINC00116Q8NCU8 138 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 AK7Q96M32 723 aa10.18□□□□□ -0.78
TRIM59-204ENST00000471396 UBR2Q8IWV8 1755 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 MAPK8IP3Q9UPT6 1336 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 TJP1Q07157 1748 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 TEFQ10587 303 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 IL17REQ8NFR9 667 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 SLC4A9Q96Q91 983 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 MTFR1LQ9H019 292 aa10.17□□□□□ -0.78
TRIM59-204ENST00000471396 PNNQ9H307 717 aaKnown RBP10.17□□□□□ -0.78
TRIM59-204ENST00000471396 KCPQ6ZWJ8 1503 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms