RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
LDHB-206ENST00000470985 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
LDHB-206ENST00000470985 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
LDHB-206ENST00000470985 PARD3Q8TEW0 1356 aa11.29□□□□□ -0.6
LDHB-206ENST00000470985 TRIM37O94972 964 aa11.29□□□□□ -0.6
LDHB-206ENST00000470985 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
LDHB-206ENST00000470985 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
LDHB-206ENST00000470985 TMEM131LA2VDJ0 1609 aa11.28□□□□□ -0.6
LDHB-206ENST00000470985 APBA3O96018 575 aa11.28□□□□□ -0.6
LDHB-206ENST00000470985 NBPF8Q3BBV2 869 aa11.28□□□□□ -0.6
LDHB-206ENST00000470985 NBPF14Q5TI25 921 aa11.28□□□□□ -0.6
LDHB-206ENST00000470985 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
LDHB-206ENST00000470985 PXDNQ92626 1479 aa11.27□□□□□ -0.6
LDHB-206ENST00000470985 GPR37O15354 613 aa11.27□□□□□ -0.61
LDHB-206ENST00000470985 XPCQ01831 940 aaPredicted RBP11.27□□□□□ -0.61
LDHB-206ENST00000470985 MAP2K5Q13163 448 aa11.27□□□□□ -0.61
LDHB-206ENST00000470985 SCUBE3Q8IX30 993 aa11.27□□□□□ -0.61
LDHB-206ENST00000470985 USP32Q8NFA0 1604 aa11.27□□□□□ -0.61
LDHB-206ENST00000470985 RPRD2Q5VT52 1461 aaKnown RBP11.26□□□□□ -0.61
LDHB-206ENST00000470985 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
LDHB-206ENST00000470985 FAM83GA6ND36 823 aa11.26□□□□□ -0.61
LDHB-206ENST00000470985 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
LDHB-206ENST00000470985 DLC1Q96QB1 1528 aa11.25□□□□□ -0.61
LDHB-206ENST00000470985 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
LDHB-206ENST00000470985 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
LDHB-206ENST00000470985 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
LDHB-206ENST00000470985 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
LDHB-206ENST00000470985 ARHGEF5Q12774 1597 aa11.24□□□□□ -0.61
LDHB-206ENST00000470985 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
LDHB-206ENST00000470985 ADH1BP00325 375 aa11.24□□□□□ -0.61
LDHB-206ENST00000470985 SPSB2Q99619 263 aa11.24□□□□□ -0.61
LDHB-206ENST00000470985 SLC6A16Q9GZN6 736 aa11.24□□□□□ -0.61
LDHB-206ENST00000470985 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
LDHB-206ENST00000470985 IRF6O14896 467 aa11.23□□□□□ -0.61
LDHB-206ENST00000470985 SLC19A1P41440 591 aa11.23□□□□□ -0.61
LDHB-206ENST00000470985 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
LDHB-206ENST00000470985 DNAJC5GQ8N7S2 189 aa11.23□□□□□ -0.61
LDHB-206ENST00000470985 ADGRL2O95490 1459 aa11.23□□□□□ -0.61
LDHB-206ENST00000470985 GCC2Q8IWJ2 1684 aa11.23□□□□□ -0.61
LDHB-206ENST00000470985 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
LDHB-206ENST00000470985 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
LDHB-206ENST00000470985 GCGRP47871 477 aa11.22□□□□□ -0.61
LDHB-206ENST00000470985 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
LDHB-206ENST00000470985 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
LDHB-206ENST00000470985 TLL1O43897 1013 aa11.21□□□□□ -0.61
LDHB-206ENST00000470985 S1PR4O95977 384 aa11.21□□□□□ -0.61
LDHB-206ENST00000470985 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
LDHB-206ENST00000470985 SLC52A1Q9NWF4 448 aa11.21□□□□□ -0.61
LDHB-206ENST00000470985 PCNTO95613 3336 aa11.21□□□□□ -0.62
LDHB-206ENST00000470985 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
LDHB-206ENST00000470985 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
LDHB-206ENST00000470985 FUT2Q10981 343 aa11.2□□□□□ -0.62
LDHB-206ENST00000470985 GPR162Q16538 588 aa11.2□□□□□ -0.62
LDHB-206ENST00000470985 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
LDHB-206ENST00000470985 NWD2Q9ULI1 1742 aa11.2□□□□□ -0.62
LDHB-206ENST00000470985 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
LDHB-206ENST00000470985 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
LDHB-206ENST00000470985 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
LDHB-206ENST00000470985 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
LDHB-206ENST00000470985 NRXN3Q9Y4C0 1643 aa11.19□□□□□ -0.62
LDHB-206ENST00000470985 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
LDHB-206ENST00000470985 EEA1Q15075 1411 aa11.18□□□□□ -0.62
LDHB-206ENST00000470985 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
LDHB-206ENST00000470985 METP08581 1390 aa11.18□□□□□ -0.62
LDHB-206ENST00000470985 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
LDHB-206ENST00000470985 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
LDHB-206ENST00000470985 MORN1Q5T089 497 aa11.17□□□□□ -0.62
LDHB-206ENST00000470985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
LDHB-206ENST00000470985 FOXO3O43524 673 aa11.16□□□□□ -0.62
LDHB-206ENST00000470985 Q3C1V9 767 aa11.16□□□□□ -0.62
LDHB-206ENST00000470985 FAM196AQ6ZSG2 479 aa11.16□□□□□ -0.62
LDHB-206ENST00000470985 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
LDHB-206ENST00000470985 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
LDHB-206ENST00000470985 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.62
LDHB-206ENST00000470985 CLCN1P35523 988 aa11.15□□□□□ -0.62
LDHB-206ENST00000470985 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
LDHB-206ENST00000470985 GPBP1L1Q9HC44 474 aaPredicted RBP11.15□□□□□ -0.62
LDHB-206ENST00000470985 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
LDHB-206ENST00000470985 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
LDHB-206ENST00000470985 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
LDHB-206ENST00000470985 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
LDHB-206ENST00000470985 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
LDHB-206ENST00000470985 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
LDHB-206ENST00000470985 KANK1Q14678 1352 aa11.14□□□□□ -0.63
LDHB-206ENST00000470985 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
LDHB-206ENST00000470985 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
LDHB-206ENST00000470985 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
LDHB-206ENST00000470985 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
LDHB-206ENST00000470985 NEXMIFQ5QGS0 1516 aa11.13□□□□□ -0.63
LDHB-206ENST00000470985 MAP3K5Q99683 1374 aa11.13□□□□□ -0.63
LDHB-206ENST00000470985 KDM4AO75164 1064 aa11.12□□□□□ -0.63
LDHB-206ENST00000470985 USP46P62068 366 aa11.12□□□□□ -0.63
LDHB-206ENST00000470985 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
LDHB-206ENST00000470985 ZNF598Q86UK7 904 aaKnown RBP11.12□□□□□ -0.63
LDHB-206ENST00000470985 CCDC102AQ96A19 550 aa11.12□□□□□ -0.63
LDHB-206ENST00000470985 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
LDHB-206ENST00000470985 KIF15Q9NS87 1388 aa11.12□□□□□ -0.63
LDHB-206ENST00000470985 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
LDHB-206ENST00000470985 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
LDHB-206ENST00000470985 CROCC2H7BZ55 1655 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms