RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 ATG3Q9NT62 314 aa21.76■■□□□ 1.07
PKDCC-203ENST00000470578 LOC102724428A0A0B4J2F2 783 aa21.75■■□□□ 1.07
PKDCC-203ENST00000470578 SIK1P57059 783 aa21.75■■□□□ 1.07
PKDCC-203ENST00000470578 TFCP2L1Q9NZI6 479 aa21.75■■□□□ 1.07
PKDCC-203ENST00000470578 PPP1R1BQ9UD71 204 aaPredicted RBP21.75■■□□□ 1.07
PKDCC-203ENST00000470578 COL5A3P25940 1745 aaPredicted RBP21.75■■□□□ 1.07
PKDCC-203ENST00000470578 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
PKDCC-203ENST00000470578 UBR3Q6ZT12 1888 aa21.74■■□□□ 1.07
PKDCC-203ENST00000470578 SIPA1L3O60292 1781 aaPredicted RBP21.74■■□□□ 1.07
PKDCC-203ENST00000470578 RNMTO43148 476 aaKnown RBP21.73■■□□□ 1.07
PKDCC-203ENST00000470578 ZBTB7AO95365 584 aa21.73■■□□□ 1.07
PKDCC-203ENST00000470578 HMGB2P26583 209 aaKnown RBP21.73■■□□□ 1.07
PKDCC-203ENST00000470578 NFATC2IPQ8NCF5 419 aa21.73■■□□□ 1.07
PKDCC-203ENST00000470578 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
PKDCC-203ENST00000470578 ATF5Q9Y2D1 282 aaPredicted RBP21.73■■□□□ 1.07
PKDCC-203ENST00000470578 DLG5Q8TDM6 1919 aa21.72■■□□□ 1.07
PKDCC-203ENST00000470578 FCHSD2O94868 740 aa21.72■■□□□ 1.07
PKDCC-203ENST00000470578 PHACTR3Q96KR7 559 aa21.72■■□□□ 1.07
PKDCC-203ENST00000470578 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
PKDCC-203ENST00000470578 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
PKDCC-203ENST00000470578 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
PKDCC-203ENST00000470578 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
PKDCC-203ENST00000470578 PNPLA7Q6ZV29 1317 aa21.71■■□□□ 1.07
PKDCC-203ENST00000470578 TJP1Q07157 1748 aa21.71■■□□□ 1.07
PKDCC-203ENST00000470578 CICQ96RK0 1608 aaPredicted RBP21.7■■□□□ 1.06
PKDCC-203ENST00000470578 AK7Q96M32 723 aa21.7■■□□□ 1.06
PKDCC-203ENST00000470578 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
PKDCC-203ENST00000470578 NEFMP07197 916 aa21.69■■□□□ 1.06
PKDCC-203ENST00000470578 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
PKDCC-203ENST00000470578 PRKRIP1Q9H875 184 aaPredicted RBP21.69■■□□□ 1.06
PKDCC-203ENST00000470578 ITPK1Q13572 414 aa21.68■■□□□ 1.06
PKDCC-203ENST00000470578 MTFR1LQ9H019 292 aa21.68■■□□□ 1.06
PKDCC-203ENST00000470578 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
PKDCC-203ENST00000470578 COL24A1Q17RW2 1714 aa21.66■■□□□ 1.06
PKDCC-203ENST00000470578 MSH5O43196 834 aa21.66■■□□□ 1.06
PKDCC-203ENST00000470578 PTGER2P43116 358 aa21.66■■□□□ 1.06
PKDCC-203ENST00000470578 KCPQ6ZWJ8 1503 aa21.65■■□□□ 1.06
PKDCC-203ENST00000470578 TEFQ10587 303 aa21.65■■□□□ 1.06
PKDCC-203ENST00000470578 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
PKDCC-203ENST00000470578 MAPK8IP3Q9UPT6 1336 aa21.64■■□□□ 1.05
PKDCC-203ENST00000470578 CEMIPQ8WUJ3 1361 aa21.63■■□□□ 1.05
PKDCC-203ENST00000470578 MYH14Q7Z406 1995 aaKnown RBP21.63■■□□□ 1.05
PKDCC-203ENST00000470578 PHF14O94880 888 aa21.63■■□□□ 1.05
PKDCC-203ENST00000470578 SLC39A6Q13433 755 aa21.63■■□□□ 1.05
PKDCC-203ENST00000470578 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
PKDCC-203ENST00000470578 SLC16A10Q8TF71 515 aa21.63■■□□□ 1.05
PKDCC-203ENST00000470578 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
PKDCC-203ENST00000470578 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
PKDCC-203ENST00000470578 GNPATO15228 680 aa21.62■■□□□ 1.05
PKDCC-203ENST00000470578 COL23A1Q86Y22 540 aaPredicted RBP21.62■■□□□ 1.05
PKDCC-203ENST00000470578 FLAD1Q8NFF5 587 aa21.62■■□□□ 1.05
PKDCC-203ENST00000470578 TTC5Q8N0Z6 440 aa21.61■■□□□ 1.05
PKDCC-203ENST00000470578 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
PKDCC-203ENST00000470578 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
PKDCC-203ENST00000470578 WDR43Q15061 677 aaKnown RBP eCLIP21.6■■□□□ 1.05
PKDCC-203ENST00000470578 MCM10Q7L590 875 aa21.6■■□□□ 1.05
PKDCC-203ENST00000470578 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
PKDCC-203ENST00000470578 CNTNAP4Q9C0A0 1308 aa21.59■■□□□ 1.05
PKDCC-203ENST00000470578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
PKDCC-203ENST00000470578 SSFA2P28290 1259 aa21.59■■□□□ 1.05
PKDCC-203ENST00000470578 SGIP1Q9BQI5 828 aa21.59■■□□□ 1.05
PKDCC-203ENST00000470578 POLD1P28340 1107 aa21.57■■□□□ 1.04
PKDCC-203ENST00000470578 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
PKDCC-203ENST00000470578 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
PKDCC-203ENST00000470578 MSL1Q68DK7 614 aa21.57■■□□□ 1.04
PKDCC-203ENST00000470578 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
PKDCC-203ENST00000470578 DCAF8L1A6NGE4 600 aa21.56■■□□□ 1.04
PKDCC-203ENST00000470578 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
PKDCC-203ENST00000470578 RTCBQ9Y3I0 505 aaKnown RBP21.56■■□□□ 1.04
PKDCC-203ENST00000470578 BTBD11A6QL63 1104 aa21.55■■□□□ 1.04
PKDCC-203ENST00000470578 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
PKDCC-203ENST00000470578 RC3H1Q5TC82 1133 aaKnown RBP21.55■■□□□ 1.04
PKDCC-203ENST00000470578 ZNF790Q6PG37 636 aa21.55■■□□□ 1.04
PKDCC-203ENST00000470578 DNAJC10Q8IXB1 793 aa21.55■■□□□ 1.04
PKDCC-203ENST00000470578 ARXQ96QS3 562 aa21.55■■□□□ 1.04
PKDCC-203ENST00000470578 FHDC1Q9C0D6 1143 aaPredicted RBP21.55■■□□□ 1.04
PKDCC-203ENST00000470578 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
PKDCC-203ENST00000470578 SYT17Q9BSW7 474 aa21.54■■□□□ 1.04
PKDCC-203ENST00000470578 ANP32CO43423 234 aa21.53■■□□□ 1.04
PKDCC-203ENST00000470578 CCDC146Q8IYE0 955 aa21.53■■□□□ 1.04
PKDCC-203ENST00000470578 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
PKDCC-203ENST00000470578 ZNF496Q96IT1 587 aaPredicted RBP21.52■■□□□ 1.04
PKDCC-203ENST00000470578 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
PKDCC-203ENST00000470578 ADRA2BP18089 450 aa21.51■■□□□ 1.03
PKDCC-203ENST00000470578 TRAPPC3LQ5T215 181 aa21.51■■□□□ 1.03
PKDCC-203ENST00000470578 RPS6KA4O75676 772 aa21.5■■□□□ 1.03
PKDCC-203ENST00000470578 KLHL34Q8N239 644 aa21.5■■□□□ 1.03
PKDCC-203ENST00000470578 FMNL2Q96PY5 1086 aa21.5■■□□□ 1.03
PKDCC-203ENST00000470578 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
PKDCC-203ENST00000470578 ADAMTS8Q9UP79 889 aa21.5■■□□□ 1.03
PKDCC-203ENST00000470578 LAMB4A4D0S4 1761 aa21.5■■□□□ 1.03
PKDCC-203ENST00000470578 CYP19A1P11511 503 aaPredicted RBP21.49■■□□□ 1.03
PKDCC-203ENST00000470578 RUNDC1Q96C34 613 aa21.49■■□□□ 1.03
PKDCC-203ENST00000470578 KCNQ3O43525 872 aa21.48■■□□□ 1.03
PKDCC-203ENST00000470578 RIPK4P57078 832 aa21.48■■□□□ 1.03
PKDCC-203ENST00000470578 THUMPD2Q9BTF0 503 aaKnown RBP21.48■■□□□ 1.03
PKDCC-203ENST00000470578 RFC4P35249 363 aa21.47■■□□□ 1.03
PKDCC-203ENST00000470578 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
PKDCC-203ENST00000470578 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
PKDCC-203ENST00000470578 TAF7Q15545 349 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms