RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 KMT5BQ4FZB7 885 aa7.04□□□□□ -1.28
GCFC2-205ENST00000470197 TMC4Q7Z404 712 aa7.04□□□□□ -1.28
GCFC2-205ENST00000470197 JAZF1Q86VZ6 243 aa7.04□□□□□ -1.28
GCFC2-205ENST00000470197 CHMP7Q8WUX9 453 aaPredicted RBP7.04□□□□□ -1.28
GCFC2-205ENST00000470197 VTI1AQ96AJ9 217 aa7.04□□□□□ -1.28
GCFC2-205ENST00000470197 TBX22Q9Y458 520 aa7.04□□□□□ -1.28
GCFC2-205ENST00000470197 SALL2Q9Y467 1007 aaPredicted RBP7.04□□□□□ -1.28
GCFC2-205ENST00000470197 COX20Q5RI15 118 aa7.04□□□□□ -1.28
GCFC2-205ENST00000470197 ARHGAP33O14559 1287 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 HDGFP51858 240 aaKnown RBP7.03□□□□□ -1.28
GCFC2-205ENST00000470197 TCEAL1Q15170 157 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 PPP1R18Q6NYC8 613 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 DMGDHQ9UI17 866 aaKnown RBP7.03□□□□□ -1.28
GCFC2-205ENST00000470197 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 VARS2Q5ST30 1063 aaKnown RBP7.03□□□□□ -1.28
GCFC2-205ENST00000470197 SH3PXD2AQ5TCZ1 1133 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 EGFLAMQ63HQ2 1017 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 BAP1Q92560 729 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 NKX2-3Q8TAU0 364 aa7.03□□□□□ -1.28
GCFC2-205ENST00000470197 MMP16P51512 607 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 TMC1Q8TDI8 760 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 SORBS3O60504 671 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 COPS2P61201 443 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 PI16Q6UXB8 463 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 FAM129BQ96TA1 746 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 POLR3GLQ9BT43 218 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 PRKD2Q9BZL6 878 aa7.02□□□□□ -1.29
GCFC2-205ENST00000470197 TGIF2Q9GZN2 237 aa7.01□□□□□ -1.29
GCFC2-205ENST00000470197 NIF3L1Q9GZT8 377 aa7.01□□□□□ -1.29
GCFC2-205ENST00000470197 A6NHS1 94 aa7.01□□□□□ -1.29
GCFC2-205ENST00000470197 PRPF40AO75400 957 aaKnown RBP7.01□□□□□ -1.29
GCFC2-205ENST00000470197 QTRT2Q9H974 415 aaKnown RBP7.01□□□□□ -1.29
GCFC2-205ENST00000470197 VTI1BQ9UEU0 232 aa7.01□□□□□ -1.29
GCFC2-205ENST00000470197 ORC1Q13415 861 aa7.01□□□□□ -1.29
GCFC2-205ENST00000470197 XPCQ01831 940 aaPredicted RBP7□□□□□ -1.29
GCFC2-205ENST00000470197 NBPF14Q5TI25 921 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 MCF2L2Q86YR7 1114 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 SLC4A5Q9BY07 1137 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 TLDC2A0PJX2 215 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 CCDC24Q8N4L8 307 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 RNF34Q969K3 372 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 KLRG1Q96E93 195 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 SPSB2Q99619 263 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 SERTAD1Q9UHV2 236 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 PCDHB3Q9Y5E6 796 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 ANKRD13AQ8IZ07 590 aa7□□□□□ -1.29
GCFC2-205ENST00000470197 EPB41L3Q9Y2J2 1087 aaPredicted RBP7□□□□□ -1.29
GCFC2-205ENST00000470197 MRPL42Q9Y6G3 142 aaKnown RBP7□□□□□ -1.29
GCFC2-205ENST00000470197 ZSWIM4Q9H7M6 989 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 PNMA6FA0A0J9YX94 578 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 POTEB3A0JP26 581 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 ZNF76P36508 570 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 POTEBQ6S5H4 581 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 GMLQ99445 158 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 SRA1Q9HD15 236 aaKnown RBP6.99□□□□□ -1.29
GCFC2-205ENST00000470197 MARCH6O60337 910 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 LRCH3Q96II8 777 aa6.99□□□□□ -1.29
GCFC2-205ENST00000470197 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.99□□□□□ -1.29
GCFC2-205ENST00000470197 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
GCFC2-205ENST00000470197 ATP2B1P20020 1258 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 ATAD2Q6PL18 1390 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 PSMD2Q13200 908 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 MSS51Q4VC12 460 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 MRS2Q9HD23 443 aa6.98□□□□□ -1.29
GCFC2-205ENST00000470197 DDX41Q9UJV9 622 aaKnown RBP6.98□□□□□ -1.29
GCFC2-205ENST00000470197 FAM13AO94988 1023 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 BMS1Q14692 1282 aaKnown RBP6.97□□□□□ -1.29
GCFC2-205ENST00000470197 MEI1Q5TIA1 1274 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 ETNK1Q9HBU6 452 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 TMPRSS4Q9NRS4 437 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 KLHL42Q9P2K6 505 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 PLCB3Q01970 1234 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 PDE3BQ13370 1112 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 SDE2Q6IQ49 451 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 C16orf46Q6P387 395 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 POLIQ9UNA4 740 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 CUX2O14529 1486 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 USP4Q13107 963 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 MICAL1Q8TDZ2 1067 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 GPKOWQ92917 476 aaPredicted RBP eCLIP6.97□□□□□ -1.29
GCFC2-205ENST00000470197 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
GCFC2-205ENST00000470197 OPLAHO14841 1288 aa6.96□□□□□ -1.29
GCFC2-205ENST00000470197 IGFBP4P22692 258 aa6.96□□□□□ -1.29
GCFC2-205ENST00000470197 MZF1P28698 734 aaPredicted RBP6.96□□□□□ -1.29
GCFC2-205ENST00000470197 RBL2Q08999 1139 aa6.96□□□□□ -1.29
GCFC2-205ENST00000470197 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.29
GCFC2-205ENST00000470197 WBP1LQ9NX94 342 aa6.96□□□□□ -1.29
GCFC2-205ENST00000470197 ERVH48-1M5A8F1 160 aa6.96□□□□□ -1.3
GCFC2-205ENST00000470197 NDUFB5O43674 189 aa6.96□□□□□ -1.3
GCFC2-205ENST00000470197 IRS1P35568 1242 aa6.96□□□□□ -1.3
GCFC2-205ENST00000470197 ENOX2Q16206 610 aaKnown RBP6.96□□□□□ -1.3
GCFC2-205ENST00000470197 COL26A1Q96A83 441 aa6.96□□□□□ -1.3
GCFC2-205ENST00000470197 KANSL2Q9H9L4 492 aa6.96□□□□□ -1.3
GCFC2-205ENST00000470197 F6X3S4 739 aa6.96□□□□□ -1.3
GCFC2-205ENST00000470197 ZNF511Q8NB15 262 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms