RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 USP47Q96K76 1375 aa11.98□□□□□ -0.49
LSM2-210ENST00000470086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
LSM2-210ENST00000470086 CACNA1SQ13698 1873 aa11.97□□□□□ -0.49
LSM2-210ENST00000470086 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
LSM2-210ENST00000470086 PHF14O94880 888 aa11.97□□□□□ -0.49
LSM2-210ENST00000470086 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
LSM2-210ENST00000470086 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
LSM2-210ENST00000470086 TNRC18O15417 2968 aaPredicted RBP11.96□□□□□ -0.49
LSM2-210ENST00000470086 FBLN1P23142 703 aa11.96□□□□□ -0.49
LSM2-210ENST00000470086 LTV1Q96GA3 475 aaPredicted RBP11.96□□□□□ -0.49
LSM2-210ENST00000470086 TJP1Q07157 1748 aa11.96□□□□□ -0.49
LSM2-210ENST00000470086 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
LSM2-210ENST00000470086 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
LSM2-210ENST00000470086 A0A1W2PP64 1363 aa11.94□□□□□ -0.5
LSM2-210ENST00000470086 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
LSM2-210ENST00000470086 USHBP1Q8N6Y0 703 aa11.94□□□□□ -0.5
LSM2-210ENST00000470086 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
LSM2-210ENST00000470086 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
LSM2-210ENST00000470086 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
LSM2-210ENST00000470086 EVC2Q86UK5 1308 aa11.92□□□□□ -0.5
LSM2-210ENST00000470086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
LSM2-210ENST00000470086 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
LSM2-210ENST00000470086 NSD3Q9BZ95 1437 aa11.92□□□□□ -0.5
LSM2-210ENST00000470086 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
LSM2-210ENST00000470086 BCS1LQ9Y276 419 aa11.91□□□□□ -0.5
LSM2-210ENST00000470086 NRXN2Q9P2S2 1712 aa11.91□□□□□ -0.5
LSM2-210ENST00000470086 MAP3K19Q56UN5 1328 aa11.9□□□□□ -0.5
LSM2-210ENST00000470086 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
LSM2-210ENST00000470086 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
LSM2-210ENST00000470086 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
LSM2-210ENST00000470086 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
LSM2-210ENST00000470086 ITPK1Q13572 414 aa11.89□□□□□ -0.51
LSM2-210ENST00000470086 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
LSM2-210ENST00000470086 IP6K1Q92551 441 aa11.89□□□□□ -0.51
LSM2-210ENST00000470086 KDRP35968 1356 aa11.89□□□□□ -0.51
LSM2-210ENST00000470086 MMP10P09238 476 aa11.88□□□□□ -0.51
LSM2-210ENST00000470086 KCNA3P22001 575 aa11.88□□□□□ -0.51
LSM2-210ENST00000470086 HOXC9P31274 260 aa11.88□□□□□ -0.51
LSM2-210ENST00000470086 AK7Q96M32 723 aa11.88□□□□□ -0.51
LSM2-210ENST00000470086 FER1L6Q2WGJ9 1857 aa11.88□□□□□ -0.51
LSM2-210ENST00000470086 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
LSM2-210ENST00000470086 DPEP1P16444 411 aa11.87□□□□□ -0.51
LSM2-210ENST00000470086 FSTL1Q12841 308 aa11.87□□□□□ -0.51
LSM2-210ENST00000470086 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
LSM2-210ENST00000470086 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
LSM2-210ENST00000470086 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
LSM2-210ENST00000470086 RRAGCQ9HB90 399 aa11.87□□□□□ -0.51
LSM2-210ENST00000470086 THSD7BQ9C0I4 1608 aa11.86□□□□□ -0.51
LSM2-210ENST00000470086 CYP27B1O15528 508 aa11.86□□□□□ -0.51
LSM2-210ENST00000470086 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
LSM2-210ENST00000470086 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
LSM2-210ENST00000470086 SSFA2P28290 1259 aa11.85□□□□□ -0.51
LSM2-210ENST00000470086 RASSF7Q02833 373 aa11.85□□□□□ -0.51
LSM2-210ENST00000470086 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
LSM2-210ENST00000470086 FCHSD2O94868 740 aa11.84□□□□□ -0.51
LSM2-210ENST00000470086 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
LSM2-210ENST00000470086 FLAD1Q8NFF5 587 aa11.84□□□□□ -0.51
LSM2-210ENST00000470086 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
LSM2-210ENST00000470086 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
LSM2-210ENST00000470086 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 GNPATO15228 680 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 FOXN1O15353 648 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 PIGBQ92521 554 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 RNF181Q9P0P0 153 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
LSM2-210ENST00000470086 ROCK2O75116 1388 aaKnown RBP11.82□□□□□ -0.52
LSM2-210ENST00000470086 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
LSM2-210ENST00000470086 C16orf71Q8IYS4 520 aaPredicted RBP11.82□□□□□ -0.52
LSM2-210ENST00000470086 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
LSM2-210ENST00000470086 SLC4A9Q96Q91 983 aa11.82□□□□□ -0.52
LSM2-210ENST00000470086 LTBP1Q14766 1721 aa11.82□□□□□ -0.52
LSM2-210ENST00000470086 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
LSM2-210ENST00000470086 POTECB2RU33 542 aa11.8□□□□□ -0.52
LSM2-210ENST00000470086 SIK1P57059 783 aa11.8□□□□□ -0.52
LSM2-210ENST00000470086 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
LSM2-210ENST00000470086 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
LSM2-210ENST00000470086 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 GYS1P13807 737 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 CHRNA5P30532 468 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 TGFB2P61812 414 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 DDR1Q08345 913 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 L3MBTL2Q969R5 705 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
LSM2-210ENST00000470086 KDM2BQ8NHM5 1336 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
LSM2-210ENST00000470086 TMC1Q8TDI8 760 aa11.77□□□□□ -0.53
LSM2-210ENST00000470086 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
LSM2-210ENST00000470086 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
LSM2-210ENST00000470086 AMPHP49418 695 aa11.76□□□□□ -0.53
LSM2-210ENST00000470086 HSP90AB2PQ58FF8 381 aa11.76□□□□□ -0.53
LSM2-210ENST00000470086 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
LSM2-210ENST00000470086 SMG6Q86US8 1419 aaKnown RBP11.76□□□□□ -0.53
LSM2-210ENST00000470086 SCN4AP35499 1836 aa11.75□□□□□ -0.53
LSM2-210ENST00000470086 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
LSM2-210ENST00000470086 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
LSM2-210ENST00000470086 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms