RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
TPM3-215ENST00000469717 CCDC183Q5T5S1 534 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 PLCH2O75038 1416 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 TET3O43151 1660 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 ZC3H13Q5T200 1668 aaKnown RBP9.57□□□□□ -0.88
TPM3-215ENST00000469717 INO80Q9ULG1 1556 aaPredicted RBP9.56□□□□□ -0.88
TPM3-215ENST00000469717 ERICH4A6NGS2 130 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 TRIM6-TRIM34B2RNG4 842 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
TPM3-215ENST00000469717 NFE2L2Q16236 605 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 FANCAO15360 1455 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 RPAP1Q9BWH6 1393 aaPredicted RBP9.56□□□□□ -0.88
TPM3-215ENST00000469717 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 MX1P20591 662 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 CAMK4Q16566 473 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 SLC4A10Q6U841 1118 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
TPM3-215ENST00000469717 ESYT1Q9BSJ8 1104 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 ADGRB1O14514 1584 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 KIF1BO60333 1816 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 ABCC1P33527 1531 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.56□□□□□ -0.88
TPM3-215ENST00000469717 FCHSD2O94868 740 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 PHF14O94880 888 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 DDX54Q8TDD1 881 aaKnown RBP9.56□□□□□ -0.88
TPM3-215ENST00000469717 BCCIPQ9P287 314 aaKnown RBP eCLIP9.56□□□□□ -0.88
TPM3-215ENST00000469717 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
TPM3-215ENST00000469717 CHAF1AQ13111 956 aaPredicted RBP9.55□□□□□ -0.88
TPM3-215ENST00000469717 LUZP1Q86V48 1076 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 LTV1Q96GA3 475 aaPredicted RBP9.55□□□□□ -0.88
TPM3-215ENST00000469717 API5Q9BZZ5 524 aaKnown RBP9.55□□□□□ -0.88
TPM3-215ENST00000469717 CTNNA3Q9UI47 895 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 CTIFO43310 598 aaKnown RBP9.55□□□□□ -0.88
TPM3-215ENST00000469717 KCNJ4P48050 445 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 FAM173BQ6P4H8 233 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 FAM184AQ8NB25 1140 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.55□□□□□ -0.88
TPM3-215ENST00000469717 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 POLKQ9UBT6 870 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 ERCC6L2Q5T890 1561 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 RTL1A6NKG5 1358 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 USP32Q8NFA0 1604 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 GNAI1P63096 354 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 DIAPH3Q9NSV4 1193 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 MIS18AQ9NYP9 233 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 NSD2O96028 1365 aa9.55□□□□□ -0.88
TPM3-215ENST00000469717 SLFN14P0C7P3 912 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 DNM1Q05193 864 aaKnown RBP9.54□□□□□ -0.88
TPM3-215ENST00000469717 UVSSAQ2YD98 709 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 FUCA2Q9BTY2 467 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 NRXN1Q9ULB1 1477 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 NPHP1O15259 732 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 LARGE1O95461 756 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 CCDC186Q7Z3E2 898 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 FAM135BQ49AJ0 1406 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 ZNF853P0CG23 659 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
TPM3-215ENST00000469717 SYT1P21579 422 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
TPM3-215ENST00000469717 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
TPM3-215ENST00000469717 IDI1Q13907 227 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 CKAP2LQ8IYA6 745 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 RGS12O14924 1447 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 G2E3Q7L622 706 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 OGFRQ9NZT2 677 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 CHMLP26374 656 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 ARID5BQ14865 1188 aa9.53□□□□□ -0.88
TPM3-215ENST00000469717 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 MCM10Q7L590 875 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 CAMSAP1Q5T5Y3 1602 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 ZSCAN22P10073 491 aaPredicted RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 TNNT1P13805 278 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 HSPA2P54652 639 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 RPAP2Q8IXW5 612 aaPredicted RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 INTS4Q96HW7 963 aaKnown RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 IL1RAPL2Q9NP60 686 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 ZCCHC11Q5TAX3 1644 aaKnown RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 USP27XA6NNY8 438 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 UBE2HP62256 183 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 COL9A3Q14050 684 aaPredicted RBP9.52□□□□□ -0.89
TPM3-215ENST00000469717 DRC7Q8IY82 874 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
TPM3-215ENST00000469717 DEPDC5O75140 1603 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
TPM3-215ENST00000469717 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 DDX41Q9UJV9 622 aaKnown RBP9.51□□□□□ -0.89
TPM3-215ENST00000469717 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 PNPLA6Q8IY17 1366 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 PNMA6EA0A0J9YXQ4 647 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 STX6O43752 255 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms