RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 TMEM131LA2VDJ0 1609 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 C8orf58Q8NAV2 365 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
KCNC4-206ENST00000469655 NPHP1O15259 732 aa18.47■□□□□ 0.55
KCNC4-206ENST00000469655 DHX37Q8IY37 1157 aaKnown RBP18.47■□□□□ 0.55
KCNC4-206ENST00000469655 KIF2CQ99661 725 aa18.47■□□□□ 0.55
KCNC4-206ENST00000469655 CT47B1P0C2W7 299 aaPredicted RBP18.46■□□□□ 0.55
KCNC4-206ENST00000469655 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
KCNC4-206ENST00000469655 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
KCNC4-206ENST00000469655 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
KCNC4-206ENST00000469655 ZNF592Q92610 1267 aa18.46■□□□□ 0.55
KCNC4-206ENST00000469655 IL13P35225 146 aa18.46■□□□□ 0.54
KCNC4-206ENST00000469655 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.54
KCNC4-206ENST00000469655 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.54
KCNC4-206ENST00000469655 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
KCNC4-206ENST00000469655 ADCY5O95622 1261 aa18.45■□□□□ 0.54
KCNC4-206ENST00000469655 TBC1D9Q6ZT07 1266 aa18.45■□□□□ 0.54
KCNC4-206ENST00000469655 ZMYM3Q14202 1370 aa18.45■□□□□ 0.54
KCNC4-206ENST00000469655 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
KCNC4-206ENST00000469655 RILPL2Q969X0 211 aa18.45■□□□□ 0.54
KCNC4-206ENST00000469655 OGFRQ9NZT2 677 aa18.44■□□□□ 0.54
KCNC4-206ENST00000469655 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
KCNC4-206ENST00000469655 VAMP4O75379 141 aa18.44■□□□□ 0.54
KCNC4-206ENST00000469655 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.44■□□□□ 0.54
KCNC4-206ENST00000469655 V9GYY5 206 aaPredicted RBP18.44■□□□□ 0.54
KCNC4-206ENST00000469655 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.43■□□□□ 0.54
KCNC4-206ENST00000469655 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
KCNC4-206ENST00000469655 COL3A1P02461 1466 aaPredicted RBP18.43■□□□□ 0.54
KCNC4-206ENST00000469655 GNAI1P63096 354 aa18.43■□□□□ 0.54
KCNC4-206ENST00000469655 EXOC6BQ9Y2D4 811 aa18.43■□□□□ 0.54
KCNC4-206ENST00000469655 IL16Q14005 1332 aa18.43■□□□□ 0.54
KCNC4-206ENST00000469655 HSP90AB2PQ58FF8 381 aa18.43■□□□□ 0.54
KCNC4-206ENST00000469655 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
KCNC4-206ENST00000469655 FOXO3O43524 673 aa18.42■□□□□ 0.54
KCNC4-206ENST00000469655 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
KCNC4-206ENST00000469655 C16orf45Q96MC5 204 aaPredicted RBP18.41■□□□□ 0.54
KCNC4-206ENST00000469655 PNPLA6Q8IY17 1366 aa18.41■□□□□ 0.54
KCNC4-206ENST00000469655 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
KCNC4-206ENST00000469655 HCLS1P14317 486 aaPredicted RBP18.4■□□□□ 0.54
KCNC4-206ENST00000469655 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
KCNC4-206ENST00000469655 SLFN14P0C7P3 912 aa18.4■□□□□ 0.54
KCNC4-206ENST00000469655 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
KCNC4-206ENST00000469655 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
KCNC4-206ENST00000469655 ACEP12821 1306 aa18.39■□□□□ 0.54
KCNC4-206ENST00000469655 LTKP29376 864 aa18.39■□□□□ 0.53
KCNC4-206ENST00000469655 MRPL50Q8N5N7 158 aaKnown RBP18.39■□□□□ 0.53
KCNC4-206ENST00000469655 ST7Q9NRC1 585 aa18.39■□□□□ 0.53
KCNC4-206ENST00000469655 CCDC9Q9Y3X0 531 aaKnown RBP18.39■□□□□ 0.53
KCNC4-206ENST00000469655 LRRC7Q96NW7 1537 aa18.39■□□□□ 0.53
KCNC4-206ENST00000469655 GTF2F1P35269 517 aaKnown RBP eCLIP18.39■□□□□ 0.53
KCNC4-206ENST00000469655 FKBP5Q13451 457 aaPredicted RBP18.39■□□□□ 0.53
KCNC4-206ENST00000469655 FEZ1Q99689 392 aa18.39■□□□□ 0.53
KCNC4-206ENST00000469655 CAPN2P17655 700 aa18.39■□□□□ 0.53
KCNC4-206ENST00000469655 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.53
KCNC4-206ENST00000469655 PYCARDQ9ULZ3 195 aa18.39■□□□□ 0.53
KCNC4-206ENST00000469655 ALDH1L2Q3SY69 923 aa18.38■□□□□ 0.53
KCNC4-206ENST00000469655 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
KCNC4-206ENST00000469655 CLTCQ00610 1675 aaKnown RBP18.38■□□□□ 0.53
KCNC4-206ENST00000469655 NGDNQ8NEJ9 315 aaKnown RBP18.37■□□□□ 0.53
KCNC4-206ENST00000469655 APPP05067 770 aa18.37■□□□□ 0.53
KCNC4-206ENST00000469655 RGS22Q8NE09 1264 aa18.37■□□□□ 0.53
KCNC4-206ENST00000469655 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
KCNC4-206ENST00000469655 ZBTB7BO15156 539 aaPredicted RBP18.36■□□□□ 0.53
KCNC4-206ENST00000469655 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
KCNC4-206ENST00000469655 MEIS3Q99687 375 aa18.36■□□□□ 0.53
KCNC4-206ENST00000469655 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
KCNC4-206ENST00000469655 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
KCNC4-206ENST00000469655 EIF2S2P20042 333 aaKnown RBP18.36■□□□□ 0.53
KCNC4-206ENST00000469655 NCBP1Q09161 790 aaKnown RBP18.36■□□□□ 0.53
KCNC4-206ENST00000469655 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
KCNC4-206ENST00000469655 FAM135BQ49AJ0 1406 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 TERF2Q15554 542 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 DRC7Q8IY82 874 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 RTF1Q92541 710 aaKnown RBP18.35■□□□□ 0.53
KCNC4-206ENST00000469655 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 GABPB1Q06547 395 aaPredicted RBP18.35■□□□□ 0.53
KCNC4-206ENST00000469655 EDC4Q6P2E9 1401 aaKnown RBP18.35■□□□□ 0.53
KCNC4-206ENST00000469655 NUCB1Q02818 461 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
KCNC4-206ENST00000469655 SIRT2Q8IXJ6 389 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 CALCOCO1Q9P1Z2 691 aa18.35■□□□□ 0.53
KCNC4-206ENST00000469655 TNRQ92752 1358 aa18.34■□□□□ 0.53
KCNC4-206ENST00000469655 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
KCNC4-206ENST00000469655 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
KCNC4-206ENST00000469655 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
KCNC4-206ENST00000469655 GADD45BO75293 160 aaPredicted RBP18.33■□□□□ 0.52
KCNC4-206ENST00000469655 MBD3O95983 291 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 ANXA1P04083 346 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 ANO2Q9NQ90 1003 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 CPS1P31327 1500 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 ANKRD7Q92527 254 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.52
KCNC4-206ENST00000469655 AMPHP49418 695 aa18.32■□□□□ 0.52
KCNC4-206ENST00000469655 NEK4P51957 841 aa18.32■□□□□ 0.52
KCNC4-206ENST00000469655 AMOTL2Q9Y2J4 779 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms