RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
SEMA4D-215ENST00000469653 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
SEMA4D-215ENST00000469653 SPATA31A1Q5TZJ5 1347 aa12.68□□□□□ -0.38
SEMA4D-215ENST00000469653 ATRNO75882 1429 aa12.68□□□□□ -0.38
SEMA4D-215ENST00000469653 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-215ENST00000469653 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
SEMA4D-215ENST00000469653 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-215ENST00000469653 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-215ENST00000469653 NCAPD2Q15021 1401 aa12.66□□□□□ -0.38
SEMA4D-215ENST00000469653 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-215ENST00000469653 ZNF521Q96K83 1311 aa12.66□□□□□ -0.38
SEMA4D-215ENST00000469653 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
SEMA4D-215ENST00000469653 KDRP35968 1356 aa12.65□□□□□ -0.38
SEMA4D-215ENST00000469653 GLI3P10071 1580 aa12.65□□□□□ -0.38
SEMA4D-215ENST00000469653 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
SEMA4D-215ENST00000469653 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-215ENST00000469653 FCHSD2O94868 740 aa12.65□□□□□ -0.39
SEMA4D-215ENST00000469653 SECISBP2LQ93073 1101 aaKnown RBP12.65□□□□□ -0.39
SEMA4D-215ENST00000469653 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-215ENST00000469653 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
SEMA4D-215ENST00000469653 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
SEMA4D-215ENST00000469653 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-215ENST00000469653 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 MEGF6O75095 1541 aa12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 IL2RBP14784 551 aa12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 POTEAQ6S8J7 498 aa12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 BARGINQ6ZT62 677 aa12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 BCL2L13Q9BXK5 485 aa12.63□□□□□ -0.39
SEMA4D-215ENST00000469653 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-215ENST00000469653 RBM6P78332 1123 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-215ENST00000469653 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
SEMA4D-215ENST00000469653 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
SEMA4D-215ENST00000469653 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-215ENST00000469653 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
SEMA4D-215ENST00000469653 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
SEMA4D-215ENST00000469653 A0A0G2JS52 829 aa12.61□□□□□ -0.39
SEMA4D-215ENST00000469653 RXRBP28702 533 aa12.61□□□□□ -0.39
SEMA4D-215ENST00000469653 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
SEMA4D-215ENST00000469653 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
SEMA4D-215ENST00000469653 CLUAP1Q96AJ1 413 aa12.6□□□□□ -0.39
SEMA4D-215ENST00000469653 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
SEMA4D-215ENST00000469653 PSMD1Q99460 953 aa12.6□□□□□ -0.39
SEMA4D-215ENST00000469653 CDCA7Q9BWT1 371 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-215ENST00000469653 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
SEMA4D-215ENST00000469653 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 THSD7AQ9UPZ6 1657 aa12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 SEC24BO95487 1268 aa12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 IGHDP01880 384 aa12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 TRMT2AQ8IZ69 625 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 BCAR3O75815 825 aa12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-215ENST00000469653 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.39
SEMA4D-215ENST00000469653 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 EXOC5O00471 708 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 TICAM2Q86XR7 235 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 DDB1Q16531 1140 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.4
SEMA4D-215ENST00000469653 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-215ENST00000469653 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
SEMA4D-215ENST00000469653 APAF1O14727 1248 aa12.57□□□□□ -0.4
SEMA4D-215ENST00000469653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEMA4D-215ENST00000469653 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-215ENST00000469653 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-215ENST00000469653 FOXD4L5Q5VV16 416 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-215ENST00000469653 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-215ENST00000469653 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
SEMA4D-215ENST00000469653 FOXD4L4Q8WXT5 416 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-215ENST00000469653 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
SEMA4D-215ENST00000469653 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
SEMA4D-215ENST00000469653 GAS2L2Q8NHY3 880 aa12.55□□□□□ -0.4
SEMA4D-215ENST00000469653 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
SEMA4D-215ENST00000469653 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
SEMA4D-215ENST00000469653 CYP27B1O15528 508 aa12.55□□□□□ -0.4
SEMA4D-215ENST00000469653 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
SEMA4D-215ENST00000469653 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
SEMA4D-215ENST00000469653 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-215ENST00000469653 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
SEMA4D-215ENST00000469653 RGS12O14924 1447 aa12.54□□□□□ -0.4
SEMA4D-215ENST00000469653 RIPK4P57078 832 aa12.54□□□□□ -0.4
SEMA4D-215ENST00000469653 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
SEMA4D-215ENST00000469653 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
SEMA4D-215ENST00000469653 PHKG2P15735 406 aa12.53□□□□□ -0.4
SEMA4D-215ENST00000469653 AKAP4Q5JQC9 854 aa12.53□□□□□ -0.4
SEMA4D-215ENST00000469653 FAM43BQ6ZT52 329 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-215ENST00000469653 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-215ENST00000469653 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-215ENST00000469653 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.4
SEMA4D-215ENST00000469653 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.4
SEMA4D-215ENST00000469653 MAP3K5Q99683 1374 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms