RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 U2AF1Q01081 240 aaKnown RBP eCLIP4.85□□□□□ -1.63
COMMD3-207ENST00000468469 PLEKHO1Q53GL0 409 aaPredicted RBP4.85□□□□□ -1.63
COMMD3-207ENST00000468469 C1orf141Q5JVX7 400 aa4.85□□□□□ -1.63
COMMD3-207ENST00000468469 ZNF530Q6P9A1 599 aaPredicted RBP4.85□□□□□ -1.63
COMMD3-207ENST00000468469 DEFB132Q7Z7B7 95 aa4.85□□□□□ -1.63
COMMD3-207ENST00000468469 ACSBG1Q96GR2 724 aa4.85□□□□□ -1.63
COMMD3-207ENST00000468469 PRKRIP1Q9H875 184 aaPredicted RBP4.85□□□□□ -1.63
COMMD3-207ENST00000468469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.85□□□□□ -1.63
COMMD3-207ENST00000468469 MRC1P22897 1456 aa4.85□□□□□ -1.63
COMMD3-207ENST00000468469 NUP188Q5SRE5 1749 aa4.85□□□□□ -1.63
COMMD3-207ENST00000468469 BTAF1O14981 1849 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 SBF2Q86WG5 1849 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 KDM6AO15550 1401 aaPredicted RBP4.84□□□□□ -1.63
COMMD3-207ENST00000468469 MAP3K5Q99683 1374 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 CYP27B1O15528 508 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 ANP32CO43423 234 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 APBA3O96018 575 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 HSP90AB1P08238 724 aaKnown RBP4.84□□□□□ -1.63
COMMD3-207ENST00000468469 PHKG2P15735 406 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 PRKAR2BP31323 418 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 AMOTQ4VCS5 1084 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 MAMSTRQ6ZN01 415 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 IFNL2Q8IZJ0 200 aa4.84□□□□□ -1.63
COMMD3-207ENST00000468469 SYTL4Q96C24 671 aaPredicted RBP4.84□□□□□ -1.63
COMMD3-207ENST00000468469 BCL11BQ9C0K0 894 aaPredicted RBP4.84□□□□□ -1.63
COMMD3-207ENST00000468469 ADAMTS7Q9UKP4 1686 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 PAPPAQ13219 1627 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 MAPK8IP3Q9UPT6 1336 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 KCNQ2O43526 872 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 NEFMP07197 916 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 EN1Q05925 392 aaPredicted RBP4.83□□□□□ -1.64
COMMD3-207ENST00000468469 WDR43Q15061 677 aaKnown RBP eCLIP4.83□□□□□ -1.64
COMMD3-207ENST00000468469 NKX1-1Q15270 411 aaPredicted RBP4.83□□□□□ -1.64
COMMD3-207ENST00000468469 ASTLQ6HA08 431 aaPredicted RBP4.83□□□□□ -1.64
COMMD3-207ENST00000468469 PTF1AQ7RTS3 328 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 GAS2L2Q8NHY3 880 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 RSPH6AQ9H0K4 717 aa4.83□□□□□ -1.64
COMMD3-207ENST00000468469 PALLDQ8WX93 1383 aa4.82□□□□□ -1.64
COMMD3-207ENST00000468469 ATMINO43313 823 aaPredicted RBP4.82□□□□□ -1.64
COMMD3-207ENST00000468469 C7P10643 843 aa4.82□□□□□ -1.64
COMMD3-207ENST00000468469 PRIM1P49642 420 aaKnown RBP4.82□□□□□ -1.64
COMMD3-207ENST00000468469 EZH2Q15910 746 aaKnown RBP4.82□□□□□ -1.64
COMMD3-207ENST00000468469 MTHFSDQ2M296 383 aaKnown RBP4.82□□□□□ -1.64
COMMD3-207ENST00000468469 AKAP4Q5JQC9 854 aa4.82□□□□□ -1.64
COMMD3-207ENST00000468469 SLC39A7Q92504 469 aa4.82□□□□□ -1.64
COMMD3-207ENST00000468469 DCAF5Q96JK2 942 aa4.82□□□□□ -1.64
COMMD3-207ENST00000468469 TMOD3Q9NYL9 352 aa4.82□□□□□ -1.64
COMMD3-207ENST00000468469 LY75O60449 1722 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 C5P01031 1676 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 PLSCR1O15162 318 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 FCHSD2O94868 740 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 MPRIPQ6WCQ1 1025 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 CAMKK2Q96RR4 588 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 PNNQ9H307 717 aaKnown RBP4.81□□□□□ -1.64
COMMD3-207ENST00000468469 ITGB4P16144 1822 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 SCN11AQ9UI33 1791 aa4.81□□□□□ -1.64
COMMD3-207ENST00000468469 CEMIPQ8WUJ3 1361 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 CICQ96RK0 1608 aaPredicted RBP4.8□□□□□ -1.64
COMMD3-207ENST00000468469 GNAT3A8MTJ3 354 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 ERVV-2B6SEH9 535 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 RNMTO43148 476 aaKnown RBP4.8□□□□□ -1.64
COMMD3-207ENST00000468469 CABP4P57796 275 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 TXNRD1Q16881 649 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 SLC27A3Q5K4L6 730 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 CDAN1Q8IWY9 1227 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 CCDC146Q8IYE0 955 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 PIGBQ92521 554 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 SMARCC1Q92922 1105 aaPredicted RBP4.8□□□□□ -1.64
COMMD3-207ENST00000468469 MS4A3Q96HJ5 214 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 PHACTR3Q96KR7 559 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 PLEKHF1Q96S99 279 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 SLC52A2Q9HAB3 445 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 ANO8Q9HCE9 1232 aaPredicted RBP4.8□□□□□ -1.64
COMMD3-207ENST00000468469 MRS2Q9HD23 443 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 CCNL1Q9UK58 526 aaPredicted RBP4.8□□□□□ -1.64
COMMD3-207ENST00000468469 KCPQ6ZWJ8 1503 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 ZNF831Q5JPB2 1677 aa4.8□□□□□ -1.64
COMMD3-207ENST00000468469 TEFQ10587 303 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 NFE2L2Q16236 605 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 CCDC184Q52MB2 194 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 NBPF14Q5TI25 921 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 RTF1Q92541 710 aaKnown RBP4.79□□□□□ -1.64
COMMD3-207ENST00000468469 RUNDC1Q96C34 613 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 SCUBE2Q9NQ36 999 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 ATG3Q9NT62 314 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 STK32BQ9NY57 414 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 C4BP0C0L5 1744 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 TJP1Q07157 1748 aa4.79□□□□□ -1.64
COMMD3-207ENST00000468469 SIPA1L3O60292 1781 aaPredicted RBP4.78□□□□□ -1.64
COMMD3-207ENST00000468469 CASZ1Q86V15 1759 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 UBR2Q8IWV8 1755 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 COL5A3P25940 1745 aaPredicted RBP4.78□□□□□ -1.64
COMMD3-207ENST00000468469 LOC102724428A0A0B4J2F2 783 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 PSDA5PKW4 1024 aaPredicted RBP4.78□□□□□ -1.64
COMMD3-207ENST00000468469 HTATSF1O43719 755 aaKnown RBP4.78□□□□□ -1.64
COMMD3-207ENST00000468469 SIK1P57059 783 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 LMOD3Q0VAK6 560 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 R3HDM1Q15032 1099 aaKnown RBP4.78□□□□□ -1.64
COMMD3-207ENST00000468469 ZNF827Q17R98 1081 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 MCM10Q7L590 875 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms