RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PSDA5PKW4 1024 aaPredicted RBP15.14■□□□□ 0.01
COL4A6-205ENST00000468338 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
COL4A6-205ENST00000468338 R3HDM1Q15032 1099 aaKnown RBP15.14■□□□□ 0.01
COL4A6-205ENST00000468338 DOT1LQ8TEK3 1739 aa15.14■□□□□ 0.01
COL4A6-205ENST00000468338 KDRP35968 1356 aa15.13■□□□□ 0.01
COL4A6-205ENST00000468338 STK25O00506 426 aa15.13■□□□□ 0.01
COL4A6-205ENST00000468338 NBPF14Q5TI25 921 aa15.13■□□□□ 0.01
COL4A6-205ENST00000468338 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
COL4A6-205ENST00000468338 CHRM1P11229 460 aaPredicted RBP15.12■□□□□ 0.01
COL4A6-205ENST00000468338 SRCAPQ6ZRS2 3230 aa15.12■□□□□ 0.01
COL4A6-205ENST00000468338 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
COL4A6-205ENST00000468338 AEBP1Q8IUX7 1158 aa15.1■□□□□ 0.01
COL4A6-205ENST00000468338 LRP5O75197 1615 aa15.1■□□□□ 0.01
COL4A6-205ENST00000468338 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
COL4A6-205ENST00000468338 LY75O60449 1722 aa15.09■□□□□ 0.01
COL4A6-205ENST00000468338 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
COL4A6-205ENST00000468338 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
COL4A6-205ENST00000468338 GTPBP6O43824 516 aaPredicted RBP15.09■□□□□ 0.01
COL4A6-205ENST00000468338 PHKG2P15735 406 aa15.09■□□□□ 0.01
COL4A6-205ENST00000468338 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
COL4A6-205ENST00000468338 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
COL4A6-205ENST00000468338 ITGB4P16144 1822 aa15.08■□□□□ 0.01
COL4A6-205ENST00000468338 SLC27A3Q5K4L6 730 aa15.08■□□□□ 0
COL4A6-205ENST00000468338 SULT6B1Q6IMI4 303 aa15.08■□□□□ 0
COL4A6-205ENST00000468338 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
COL4A6-205ENST00000468338 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
COL4A6-205ENST00000468338 AMOTQ4VCS5 1084 aa15.07■□□□□ 0
COL4A6-205ENST00000468338 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
COL4A6-205ENST00000468338 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
COL4A6-205ENST00000468338 SLC15A2Q16348 729 aa15.06■□□□□ 0
COL4A6-205ENST00000468338 RYDENQ9NUL5 291 aaKnown RBP15.06■□□□□ 0
COL4A6-205ENST00000468338 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
COL4A6-205ENST00000468338 CASZ1Q86V15 1759 aa15.05■□□□□ -0
COL4A6-205ENST00000468338 PPP2R1AP30153 589 aa15.04■□□□□ -0
COL4A6-205ENST00000468338 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
COL4A6-205ENST00000468338 PIGBQ92521 554 aa15.04■□□□□ -0
COL4A6-205ENST00000468338 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
COL4A6-205ENST00000468338 STK32BQ9NY57 414 aa15.04■□□□□ -0
COL4A6-205ENST00000468338 HSP90AB1P08238 724 aaKnown RBP15.03■□□□□ -0
COL4A6-205ENST00000468338 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
COL4A6-205ENST00000468338 DCAF5Q96JK2 942 aa15.03■□□□□ -0
COL4A6-205ENST00000468338 KDM6AO15550 1401 aaPredicted RBP15.02■□□□□ -0
COL4A6-205ENST00000468338 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
COL4A6-205ENST00000468338 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
COL4A6-205ENST00000468338 ZNF827Q17R98 1081 aa15.02■□□□□ -0
COL4A6-205ENST00000468338 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
COL4A6-205ENST00000468338 RASEFQ8IZ41 740 aa15.02■□□□□ -0
COL4A6-205ENST00000468338 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
COL4A6-205ENST00000468338 PDGFDQ9GZP0 370 aaPredicted RBP15.02■□□□□ -0
COL4A6-205ENST00000468338 PALLDQ8WX93 1383 aa15.01□□□□□ -0.01
COL4A6-205ENST00000468338 HMOX1P09601 288 aa15.01□□□□□ -0.01
COL4A6-205ENST00000468338 CCNL1Q9UK58 526 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-205ENST00000468338 STK24Q9Y6E0 443 aa15.01□□□□□ -0.01
COL4A6-205ENST00000468338 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
COL4A6-205ENST00000468338 KCNQ4P56696 695 aa15□□□□□ -0.01
COL4A6-205ENST00000468338 TMOD3Q9NYL9 352 aa15□□□□□ -0.01
COL4A6-205ENST00000468338 TAF1LQ8IZX4 1826 aa14.99□□□□□ -0.01
COL4A6-205ENST00000468338 HMGB2P26583 209 aaKnown RBP14.99□□□□□ -0.01
COL4A6-205ENST00000468338 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
COL4A6-205ENST00000468338 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
COL4A6-205ENST00000468338 AKAP4Q5JQC9 854 aa14.98□□□□□ -0.01
COL4A6-205ENST00000468338 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
COL4A6-205ENST00000468338 SPON1Q9HCB6 807 aa14.98□□□□□ -0.01
COL4A6-205ENST00000468338 ATG3Q9NT62 314 aa14.98□□□□□ -0.01
COL4A6-205ENST00000468338 ASAP1Q9ULH1 1129 aa14.98□□□□□ -0.01
COL4A6-205ENST00000468338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-205ENST00000468338 DDX10Q13206 875 aaKnown RBP14.97□□□□□ -0.01
COL4A6-205ENST00000468338 MTHFSDQ2M296 383 aaKnown RBP14.97□□□□□ -0.01
COL4A6-205ENST00000468338 ZFP91Q96JP5 570 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-205ENST00000468338 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
COL4A6-205ENST00000468338 TUBGCP6Q96RT7 1819 aa14.96□□□□□ -0.01
COL4A6-205ENST00000468338 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
COL4A6-205ENST00000468338 U2SURPO15042 1029 aaKnown RBP14.96□□□□□ -0.01
COL4A6-205ENST00000468338 PTGER2P43116 358 aa14.96□□□□□ -0.01
COL4A6-205ENST00000468338 SIK1P57059 783 aa14.96□□□□□ -0.01
COL4A6-205ENST00000468338 C5P01031 1676 aa14.96□□□□□ -0.01
COL4A6-205ENST00000468338 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
COL4A6-205ENST00000468338 PYGBP11216 843 aa14.95□□□□□ -0.02
COL4A6-205ENST00000468338 MTFR1LQ9H019 292 aa14.95□□□□□ -0.02
COL4A6-205ENST00000468338 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
COL4A6-205ENST00000468338 NUDCQ9Y266 331 aa14.95□□□□□ -0.02
COL4A6-205ENST00000468338 ZNF831Q5JPB2 1677 aa14.95□□□□□ -0.02
COL4A6-205ENST00000468338 ZBTB7AO95365 584 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 CABP4P57796 275 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 RALBP1Q15311 655 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 TFCP2L1Q9NZI6 479 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 COL24A1Q17RW2 1714 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 MRC1P22897 1456 aa14.94□□□□□ -0.02
COL4A6-205ENST00000468338 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
COL4A6-205ENST00000468338 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
COL4A6-205ENST00000468338 FCHSD2O94868 740 aa14.93□□□□□ -0.02
COL4A6-205ENST00000468338 SLC4A9Q96Q91 983 aa14.93□□□□□ -0.02
COL4A6-205ENST00000468338 C4BP0C0L5 1744 aa14.92□□□□□ -0.02
COL4A6-205ENST00000468338 ITPK1Q13572 414 aa14.92□□□□□ -0.02
COL4A6-205ENST00000468338 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
COL4A6-205ENST00000468338 PHACTR3Q96KR7 559 aa14.92□□□□□ -0.02
COL4A6-205ENST00000468338 SLC52A2Q9HAB3 445 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms