RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
MSH5-213ENST00000468136 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
MSH5-213ENST00000468136 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
MSH5-213ENST00000468136 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
MSH5-213ENST00000468136 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
MSH5-213ENST00000468136 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
MSH5-213ENST00000468136 HEG1Q9ULI3 1381 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 TOM1O60784 492 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
MSH5-213ENST00000468136 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
MSH5-213ENST00000468136 MRC1P22897 1456 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 EIF5BO60841 1220 aaKnown RBP12.81□□□□□ -0.36
MSH5-213ENST00000468136 GNAI3P08754 354 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 EVA1CP58658 441 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 FLIIQ13045 1269 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
MSH5-213ENST00000468136 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
MSH5-213ENST00000468136 RGS12O14924 1447 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 PARP4Q9UKK3 1724 aaKnown RBP12.8□□□□□ -0.36
MSH5-213ENST00000468136 MEGF6O75095 1541 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 HMMRO75330 724 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 IL2RBP14784 551 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 PDE4AP27815 886 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
MSH5-213ENST00000468136 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
MSH5-213ENST00000468136 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
MSH5-213ENST00000468136 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
MSH5-213ENST00000468136 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
MSH5-213ENST00000468136 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
MSH5-213ENST00000468136 ROBO1Q9Y6N7 1651 aa12.78□□□□□ -0.36
MSH5-213ENST00000468136 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
MSH5-213ENST00000468136 FKBP5Q13451 457 aaPredicted RBP12.78□□□□□ -0.36
MSH5-213ENST00000468136 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
MSH5-213ENST00000468136 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
MSH5-213ENST00000468136 COL14A1Q05707 1796 aaKnown RBP12.78□□□□□ -0.36
MSH5-213ENST00000468136 SIPA1L3O60292 1781 aaPredicted RBP12.77□□□□□ -0.36
MSH5-213ENST00000468136 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
MSH5-213ENST00000468136 DDX58O95786 925 aaKnown RBP12.77□□□□□ -0.37
MSH5-213ENST00000468136 ANP32AP39687 249 aaKnown RBP12.77□□□□□ -0.37
MSH5-213ENST00000468136 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
MSH5-213ENST00000468136 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
MSH5-213ENST00000468136 ANKRD44Q8N8A2 993 aa12.77□□□□□ -0.37
MSH5-213ENST00000468136 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
MSH5-213ENST00000468136 CYP27B1O15528 508 aa12.76□□□□□ -0.37
MSH5-213ENST00000468136 NUCB1Q02818 461 aa12.76□□□□□ -0.37
MSH5-213ENST00000468136 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
MSH5-213ENST00000468136 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
MSH5-213ENST00000468136 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
MSH5-213ENST00000468136 GNAI2P04899 355 aa12.75□□□□□ -0.37
MSH5-213ENST00000468136 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
MSH5-213ENST00000468136 RGS3P49796 1198 aa12.75□□□□□ -0.37
MSH5-213ENST00000468136 CABP4P57796 275 aa12.75□□□□□ -0.37
MSH5-213ENST00000468136 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSH5-213ENST00000468136 ATP10DQ9P241 1426 aa12.75□□□□□ -0.37
MSH5-213ENST00000468136 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
MSH5-213ENST00000468136 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
MSH5-213ENST00000468136 DCTPP1Q9H773 170 aa12.74□□□□□ -0.37
MSH5-213ENST00000468136 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
MSH5-213ENST00000468136 G2E3Q7L622 706 aa12.73□□□□□ -0.37
MSH5-213ENST00000468136 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
MSH5-213ENST00000468136 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
MSH5-213ENST00000468136 SRCIN1Q9C0H9 1055 aa12.73□□□□□ -0.37
MSH5-213ENST00000468136 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
MSH5-213ENST00000468136 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
MSH5-213ENST00000468136 CEP85Q6P2H3 762 aa12.72□□□□□ -0.37
MSH5-213ENST00000468136 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
MSH5-213ENST00000468136 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
MSH5-213ENST00000468136 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
MSH5-213ENST00000468136 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
MSH5-213ENST00000468136 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
MSH5-213ENST00000468136 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
MSH5-213ENST00000468136 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.37
MSH5-213ENST00000468136 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
MSH5-213ENST00000468136 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
MSH5-213ENST00000468136 STRN4Q9NRL3 753 aa12.71□□□□□ -0.37
MSH5-213ENST00000468136 KCNQ3O43525 872 aa12.7□□□□□ -0.38
MSH5-213ENST00000468136 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
MSH5-213ENST00000468136 C8orf34Q49A92 452 aa12.7□□□□□ -0.38
MSH5-213ENST00000468136 MEIS3Q99687 375 aa12.7□□□□□ -0.38
MSH5-213ENST00000468136 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
MSH5-213ENST00000468136 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
MSH5-213ENST00000468136 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
MSH5-213ENST00000468136 F6X3S4 739 aa12.69□□□□□ -0.38
MSH5-213ENST00000468136 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
MSH5-213ENST00000468136 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
MSH5-213ENST00000468136 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
MSH5-213ENST00000468136 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
MSH5-213ENST00000468136 PLCH1Q4KWH8 1693 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms