RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TAF7Q15545 349 aaPredicted RBP19.87■□□□□ 0.77
SNIP1-202ENST00000468040 WDR63Q8IWG1 891 aa19.87■□□□□ 0.77
SNIP1-202ENST00000468040 PIGBQ92521 554 aa19.87■□□□□ 0.77
SNIP1-202ENST00000468040 ZNF521Q96K83 1311 aa19.86■□□□□ 0.77
SNIP1-202ENST00000468040 BABAM1Q9NWV8 329 aa19.86■□□□□ 0.77
SNIP1-202ENST00000468040 IL16Q14005 1332 aa19.85■□□□□ 0.77
SNIP1-202ENST00000468040 BTAF1O14981 1849 aa19.85■□□□□ 0.77
SNIP1-202ENST00000468040 BTBD11A6QL63 1104 aa19.84■□□□□ 0.77
SNIP1-202ENST00000468040 ILDR2Q71H61 639 aa19.84■□□□□ 0.77
SNIP1-202ENST00000468040 CFAP44Q96MT7 982 aa19.84■□□□□ 0.77
SNIP1-202ENST00000468040 IFT57Q9NWB7 429 aa19.84■□□□□ 0.77
SNIP1-202ENST00000468040 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.77
SNIP1-202ENST00000468040 TNS1Q9HBL0 1735 aaKnown RBP19.83■□□□□ 0.77
SNIP1-202ENST00000468040 GNAI1P63096 354 aa19.83■□□□□ 0.77
SNIP1-202ENST00000468040 PTF1AQ7RTS3 328 aa19.83■□□□□ 0.77
SNIP1-202ENST00000468040 CCDC125Q86Z20 511 aa19.83■□□□□ 0.77
SNIP1-202ENST00000468040 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.77
SNIP1-202ENST00000468040 EP400Q96L91 3159 aa19.83■□□□□ 0.76
SNIP1-202ENST00000468040 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
SNIP1-202ENST00000468040 TTC5Q8N0Z6 440 aa19.82■□□□□ 0.76
SNIP1-202ENST00000468040 TSPYL4Q9UJ04 414 aa19.82■□□□□ 0.76
SNIP1-202ENST00000468040 LAS1LQ9Y4W2 734 aaKnown RBP19.82■□□□□ 0.76
SNIP1-202ENST00000468040 PAPPAQ13219 1627 aa19.82■□□□□ 0.76
SNIP1-202ENST00000468040 CHL1O00533 1208 aa19.81■□□□□ 0.76
SNIP1-202ENST00000468040 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
SNIP1-202ENST00000468040 ZNF790Q6PG37 636 aa19.81■□□□□ 0.76
SNIP1-202ENST00000468040 ATG3Q9NT62 314 aa19.81■□□□□ 0.76
SNIP1-202ENST00000468040 ASAP1Q9ULH1 1129 aa19.81■□□□□ 0.76
SNIP1-202ENST00000468040 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
SNIP1-202ENST00000468040 PALLDQ8WX93 1383 aa19.8■□□□□ 0.76
SNIP1-202ENST00000468040 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
SNIP1-202ENST00000468040 APBA3O96018 575 aa19.79■□□□□ 0.76
SNIP1-202ENST00000468040 SLC39A6Q13433 755 aa19.79■□□□□ 0.76
SNIP1-202ENST00000468040 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
SNIP1-202ENST00000468040 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
SNIP1-202ENST00000468040 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
SNIP1-202ENST00000468040 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
SNIP1-202ENST00000468040 E9PSI1 815 aa19.77■□□□□ 0.76
SNIP1-202ENST00000468040 PLSCR1O15162 318 aa19.77■□□□□ 0.76
SNIP1-202ENST00000468040 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
SNIP1-202ENST00000468040 RGPD3A6NKT7 1758 aaPredicted RBP19.77■□□□□ 0.76
SNIP1-202ENST00000468040 RGPD4Q7Z3J3 1758 aa19.77■□□□□ 0.76
SNIP1-202ENST00000468040 BAG6P46379 1132 aa19.76■□□□□ 0.75
SNIP1-202ENST00000468040 FMNL2Q96PY5 1086 aa19.76■□□□□ 0.75
SNIP1-202ENST00000468040 KCPQ6ZWJ8 1503 aa19.76■□□□□ 0.75
SNIP1-202ENST00000468040 KCNQ3O43525 872 aa19.75■□□□□ 0.75
SNIP1-202ENST00000468040 UPF1Q92900 1129 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNIP1-202ENST00000468040 LY75O60449 1722 aa19.75■□□□□ 0.75
SNIP1-202ENST00000468040 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
SNIP1-202ENST00000468040 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
SNIP1-202ENST00000468040 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
SNIP1-202ENST00000468040 ZNF496Q96IT1 587 aaPredicted RBP19.74■□□□□ 0.75
SNIP1-202ENST00000468040 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
SNIP1-202ENST00000468040 ZNF831Q5JPB2 1677 aa19.73■□□□□ 0.75
SNIP1-202ENST00000468040 LOC102724428A0A0B4J2F2 783 aa19.73■□□□□ 0.75
SNIP1-202ENST00000468040 HMGB2P26583 209 aaKnown RBP19.73■□□□□ 0.75
SNIP1-202ENST00000468040 SIK1P57059 783 aa19.73■□□□□ 0.75
SNIP1-202ENST00000468040 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
SNIP1-202ENST00000468040 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
SNIP1-202ENST00000468040 TSR2Q969E8 191 aaKnown RBP19.73■□□□□ 0.75
SNIP1-202ENST00000468040 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
SNIP1-202ENST00000468040 HEG1Q9ULI3 1381 aa19.72■□□□□ 0.75
SNIP1-202ENST00000468040 SLC27A3Q5K4L6 730 aa19.72■□□□□ 0.75
SNIP1-202ENST00000468040 CDCA7LQ96GN5 454 aa19.72■□□□□ 0.75
SNIP1-202ENST00000468040 CCNL1Q9UK58 526 aaPredicted RBP19.71■□□□□ 0.75
SNIP1-202ENST00000468040 CICQ96RK0 1608 aaPredicted RBP19.7■□□□□ 0.74
SNIP1-202ENST00000468040 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
SNIP1-202ENST00000468040 TXNRD1Q16881 649 aa19.7■□□□□ 0.74
SNIP1-202ENST00000468040 TRMT2AQ8IZ69 625 aaKnown RBP19.7■□□□□ 0.74
SNIP1-202ENST00000468040 ATP6V1AP38606 617 aa19.69■□□□□ 0.74
SNIP1-202ENST00000468040 EN1Q05925 392 aaPredicted RBP19.69■□□□□ 0.74
SNIP1-202ENST00000468040 CAMKK2Q96RR4 588 aa19.69■□□□□ 0.74
SNIP1-202ENST00000468040 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
SNIP1-202ENST00000468040 SOS1Q07889 1333 aaPredicted RBP19.69■□□□□ 0.74
SNIP1-202ENST00000468040 GIGYF1O75420 1035 aaPredicted RBP19.68■□□□□ 0.74
SNIP1-202ENST00000468040 HOXB7P09629 217 aa19.68■□□□□ 0.74
SNIP1-202ENST00000468040 DEFB132Q7Z7B7 95 aa19.68■□□□□ 0.74
SNIP1-202ENST00000468040 SLC4A9Q96Q91 983 aa19.68■□□□□ 0.74
SNIP1-202ENST00000468040 DUSP27Q5VZP5 1158 aa19.67■□□□□ 0.74
SNIP1-202ENST00000468040 TJP1Q07157 1748 aa19.67■□□□□ 0.74
SNIP1-202ENST00000468040 EZH2Q15910 746 aaKnown RBP19.66■□□□□ 0.74
SNIP1-202ENST00000468040 PROM2Q8N271 834 aa19.66■□□□□ 0.74
SNIP1-202ENST00000468040 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 STARD3NLO95772 234 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
SNIP1-202ENST00000468040 ITPK1Q13572 414 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 KRT24Q2M2I5 525 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 DNAJC10Q8IXB1 793 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 C8orf58Q8NAV2 365 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 CHMP4AQ9BY43 222 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 C5P01031 1676 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 RREB1Q92766 1687 aa19.65■□□□□ 0.74
SNIP1-202ENST00000468040 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.73
SNIP1-202ENST00000468040 LRRC4BQ9NT99 713 aa19.64■□□□□ 0.73
SNIP1-202ENST00000468040 COL5A3P25940 1745 aaPredicted RBP19.64■□□□□ 0.73
SNIP1-202ENST00000468040 KCNQ4P56696 695 aa19.63■□□□□ 0.73
SNIP1-202ENST00000468040 TAF1LQ8IZX4 1826 aa19.62■□□□□ 0.73
SNIP1-202ENST00000468040 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
SNIP1-202ENST00000468040 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
SNIP1-202ENST00000468040 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms