RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 MYO1CO00159 1063 aa11.12□□□□□ -0.63
LCA5-203ENST00000467898 CTAGE5O15320 804 aa11.12□□□□□ -0.63
LCA5-203ENST00000467898 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
LCA5-203ENST00000467898 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
LCA5-203ENST00000467898 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
LCA5-203ENST00000467898 BLMP54132 1417 aaPredicted RBP11.12□□□□□ -0.63
LCA5-203ENST00000467898 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
LCA5-203ENST00000467898 NCBP1Q09161 790 aaKnown RBP11.12□□□□□ -0.63
LCA5-203ENST00000467898 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
LCA5-203ENST00000467898 SEC24BO95487 1268 aa11.11□□□□□ -0.63
LCA5-203ENST00000467898 SNX21Q969T3 373 aa11.11□□□□□ -0.63
LCA5-203ENST00000467898 RABEP1Q15276 862 aa11.11□□□□□ -0.63
LCA5-203ENST00000467898 ANKRD23Q86SG2 305 aa11.11□□□□□ -0.63
LCA5-203ENST00000467898 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
LCA5-203ENST00000467898 RBSNQ9H1K0 784 aa11.11□□□□□ -0.63
LCA5-203ENST00000467898 POLKQ9UBT6 870 aa11.11□□□□□ -0.63
LCA5-203ENST00000467898 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 CEP89Q96ST8 783 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
LCA5-203ENST00000467898 DDX49Q9Y6V7 483 aaKnown RBP11.1□□□□□ -0.63
LCA5-203ENST00000467898 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
LCA5-203ENST00000467898 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
LCA5-203ENST00000467898 KIF1BPQ96EK5 621 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
LCA5-203ENST00000467898 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 NEFHP12036 1026 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
LCA5-203ENST00000467898 NRDCO43847 1150 aa11.09□□□□□ -0.63
LCA5-203ENST00000467898 TTC31Q49AM3 519 aaPredicted RBP11.09□□□□□ -0.63
LCA5-203ENST00000467898 MKL1Q969V6 931 aa11.09□□□□□ -0.63
LCA5-203ENST00000467898 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
LCA5-203ENST00000467898 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
LCA5-203ENST00000467898 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
LCA5-203ENST00000467898 SLFNL1Q499Z3 407 aa11.08□□□□□ -0.64
LCA5-203ENST00000467898 TEX35Q5T0J7 233 aa11.08□□□□□ -0.64
LCA5-203ENST00000467898 FBXO31Q5XUX0 539 aaPredicted RBP11.08□□□□□ -0.64
LCA5-203ENST00000467898 TMEM132EQ6IEE7 984 aa11.08□□□□□ -0.64
LCA5-203ENST00000467898 ZNF397Q8NF99 534 aaPredicted RBP11.08□□□□□ -0.64
LCA5-203ENST00000467898 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
LCA5-203ENST00000467898 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
LCA5-203ENST00000467898 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
LCA5-203ENST00000467898 ANKRD33BA6NCL7 494 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
LCA5-203ENST00000467898 TPM3P06753 285 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 PPP2R1AP30153 589 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 SRPK2P78362 688 aaKnown RBP11.07□□□□□ -0.64
LCA5-203ENST00000467898 LRSAM1Q6UWE0 723 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 ANKRD20A12PQ8NF67 263 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 TRERF1Q96PN7 1200 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 TMX1Q9H3N1 280 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■■■■ 149.1
LCA5-203ENST00000467898 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 H0YHG0 523 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 MAP2K2P36507 400 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 SARNPP82979 210 aaKnown RBP11.07□□□□□ -0.64
LCA5-203ENST00000467898 BIRC2Q13490 618 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 CCDC96Q2M329 555 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 DNAJC21Q5F1R6 531 aaKnown RBP11.07□□□□□ -0.64
LCA5-203ENST00000467898 ZNF513Q8N8E2 541 aaPredicted RBP11.07□□□□□ -0.64
LCA5-203ENST00000467898 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
LCA5-203ENST00000467898 MAP9Q49MG5 647 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 NUTM2DQ5VT03 806 aaPredicted RBP11.06□□□□□ -0.64
LCA5-203ENST00000467898 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 PTPRMP28827 1452 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 SYT10Q6XYQ8 523 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 SRLQ86TD4 932 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 C10orf67Q8IYJ2 551 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 PLIN1O60240 522 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 COQ9O75208 318 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 MAGEA9P43362 315 aa11.06□□□□□ -0.64
LCA5-203ENST00000467898 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
LCA5-203ENST00000467898 IRX1P78414 480 aaPredicted RBP11.05□□□□□ -0.64
LCA5-203ENST00000467898 NUCKS1Q9H1E3 243 aaKnown RBP11.05□□□□□ -0.64
LCA5-203ENST00000467898 SMTNL1A8MU46 457 aa11.05□□□□□ -0.64
LCA5-203ENST00000467898 NUCB2P80303 420 aa11.05□□□□□ -0.64
LCA5-203ENST00000467898 HDAC1Q13547 482 aaPredicted RBP11.05□□□□□ -0.64
LCA5-203ENST00000467898 ZNF526Q8TF50 670 aaPredicted RBP11.05□□□□□ -0.64
LCA5-203ENST00000467898 GPS2Q13227 327 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 UVSSAQ2YD98 709 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 IQUBQ8NA54 791 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 ERCC3P19447 782 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 PRIM1P49642 420 aaKnown RBP11.04□□□□□ -0.64
LCA5-203ENST00000467898 GYS2P54840 703 aa11.04□□□□□ -0.64
LCA5-203ENST00000467898 V9GYY5 206 aaPredicted RBP11.04□□□□□ -0.64
LCA5-203ENST00000467898 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
LCA5-203ENST00000467898 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
LCA5-203ENST00000467898 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
LCA5-203ENST00000467898 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
LCA5-203ENST00000467898 NFATC2IPQ8NCF5 419 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms