RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 ZGPATQ8N5A5 531 aaKnown RBP17.78■□□□□ 0.44
SEC16A-208ENST00000467838 SLC26A8Q96RN1 970 aa17.78■□□□□ 0.44
SEC16A-208ENST00000467838 MCM10Q7L590 875 aa17.77■□□□□ 0.44
SEC16A-208ENST00000467838 KDRP35968 1356 aa17.77■□□□□ 0.43
SEC16A-208ENST00000467838 GPT2Q8TD30 523 aa17.77■□□□□ 0.43
SEC16A-208ENST00000467838 CACNA1FO60840 1977 aa17.76■□□□□ 0.43
SEC16A-208ENST00000467838 ROBO2Q9HCK4 1378 aa17.76■□□□□ 0.43
SEC16A-208ENST00000467838 PLEKHG3A1L390 1219 aa17.76■□□□□ 0.43
SEC16A-208ENST00000467838 MCM2P49736 904 aa17.76■□□□□ 0.43
SEC16A-208ENST00000467838 TERF1P54274 439 aa17.76■□□□□ 0.43
SEC16A-208ENST00000467838 OFD1O75665 1012 aa17.75■□□□□ 0.43
SEC16A-208ENST00000467838 CUL4AQ13619 759 aa17.75■□□□□ 0.43
SEC16A-208ENST00000467838 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 ANAPC15P60006 121 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 ANKLE2Q86XL3 938 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 RBSNQ9H1K0 784 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 TBX22Q9Y458 520 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
SEC16A-208ENST00000467838 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
SEC16A-208ENST00000467838 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
SEC16A-208ENST00000467838 BRD1O95696 1058 aa17.72■□□□□ 0.43
SEC16A-208ENST00000467838 MBD3O95983 291 aa17.72■□□□□ 0.43
SEC16A-208ENST00000467838 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
SEC16A-208ENST00000467838 LRSAM1Q6UWE0 723 aa17.72■□□□□ 0.43
SEC16A-208ENST00000467838 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.72■□□□□ 0.43
SEC16A-208ENST00000467838 INTS4Q96HW7 963 aaKnown RBP17.72■□□□□ 0.43
SEC16A-208ENST00000467838 TMX3Q96JJ7 454 aa17.72■□□□□ 0.43
SEC16A-208ENST00000467838 ESYT1Q9BSJ8 1104 aa17.72■□□□□ 0.43
SEC16A-208ENST00000467838 ACEP12821 1306 aa17.72■□□□□ 0.43
SEC16A-208ENST00000467838 EPB41L2O43491 1005 aaKnown RBP17.71■□□□□ 0.43
SEC16A-208ENST00000467838 ZNF500O60304 480 aaPredicted RBP17.71■□□□□ 0.43
SEC16A-208ENST00000467838 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
SEC16A-208ENST00000467838 GNAI2P04899 355 aa17.71■□□□□ 0.43
SEC16A-208ENST00000467838 AOX1Q06278 1338 aa17.71■□□□□ 0.43
SEC16A-208ENST00000467838 MAP3K19Q56UN5 1328 aa17.71■□□□□ 0.43
SEC16A-208ENST00000467838 PTPRUQ92729 1446 aa17.71■□□□□ 0.43
SEC16A-208ENST00000467838 HSP90AB2PQ58FF8 381 aa17.71■□□□□ 0.43
SEC16A-208ENST00000467838 G2E3Q7L622 706 aa17.71■□□□□ 0.43
SEC16A-208ENST00000467838 APBB1O00213 710 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 MSNP26038 577 aaKnown RBP17.7■□□□□ 0.42
SEC16A-208ENST00000467838 GLIPR1L2Q4G1C9 344 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 TMEM63CQ9P1W3 806 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 SBNO1A3KN83 1393 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 SOS1Q07889 1333 aaPredicted RBP17.7■□□□□ 0.42
SEC16A-208ENST00000467838 FLT4P35916 1363 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
SEC16A-208ENST00000467838 NCLP19338 710 aaKnown RBP17.69■□□□□ 0.42
SEC16A-208ENST00000467838 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
SEC16A-208ENST00000467838 USP54Q70EL1 1684 aa17.69■□□□□ 0.42
SEC16A-208ENST00000467838 MX1P20591 662 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 MCCP23508 829 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 MCM5P33992 734 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.68■□□□□ 0.42
SEC16A-208ENST00000467838 RBM27Q9P2N5 1060 aaKnown RBP17.68■□□□□ 0.42
SEC16A-208ENST00000467838 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 KDM4FA0A1W2PPD8 638 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
SEC16A-208ENST00000467838 GNAI3P08754 354 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 NEK4P51957 841 aa17.68■□□□□ 0.42
SEC16A-208ENST00000467838 MTHFSDQ2M296 383 aaKnown RBP17.68■□□□□ 0.42
SEC16A-208ENST00000467838 F6X3S4 739 aa17.67■□□□□ 0.42
SEC16A-208ENST00000467838 CHMLP26374 656 aa17.67■□□□□ 0.42
SEC16A-208ENST00000467838 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
SEC16A-208ENST00000467838 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
SEC16A-208ENST00000467838 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
SEC16A-208ENST00000467838 EXOC6BQ9Y2D4 811 aa17.66■□□□□ 0.42
SEC16A-208ENST00000467838 PIK3C2AO00443 1686 aa17.66■□□□□ 0.42
SEC16A-208ENST00000467838 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
SEC16A-208ENST00000467838 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
SEC16A-208ENST00000467838 RTF1Q92541 710 aaKnown RBP17.65■□□□□ 0.42
SEC16A-208ENST00000467838 PALD1Q9ULE6 856 aa17.65■□□□□ 0.42
SEC16A-208ENST00000467838 NSFL1CQ9UNZ2 370 aaKnown RBP17.65■□□□□ 0.42
SEC16A-208ENST00000467838 ZKSCAN5Q9Y2L8 839 aa17.65■□□□□ 0.42
SEC16A-208ENST00000467838 FOXO3O43524 673 aa17.64■□□□□ 0.41
SEC16A-208ENST00000467838 FLIIQ13045 1269 aa17.64■□□□□ 0.41
SEC16A-208ENST00000467838 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
SEC16A-208ENST00000467838 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
SEC16A-208ENST00000467838 SYCE3A1L190 88 aa17.64■□□□□ 0.41
SEC16A-208ENST00000467838 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
SEC16A-208ENST00000467838 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
SEC16A-208ENST00000467838 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
SEC16A-208ENST00000467838 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
SEC16A-208ENST00000467838 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
SEC16A-208ENST00000467838 CHAMP1Q96JM3 812 aa17.62■□□□□ 0.41
SEC16A-208ENST00000467838 BABAM1Q9NWV8 329 aa17.62■□□□□ 0.41
SEC16A-208ENST00000467838 CCDC39Q9UFE4 941 aa17.62■□□□□ 0.41
SEC16A-208ENST00000467838 TSHZ3Q63HK5 1081 aa17.61■□□□□ 0.41
SEC16A-208ENST00000467838 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
SEC16A-208ENST00000467838 KCNA6P17658 529 aa17.6■□□□□ 0.41
SEC16A-208ENST00000467838 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
SEC16A-208ENST00000467838 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
SEC16A-208ENST00000467838 EYA1Q99502 592 aa17.6■□□□□ 0.41
SEC16A-208ENST00000467838 ANO2Q9NQ90 1003 aa17.6■□□□□ 0.41
SEC16A-208ENST00000467838 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
SEC16A-208ENST00000467838 HSPA4P34932 840 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms