RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 Q6ZNB5 142 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 TRIM67Q6ZTA4 783 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 PROSER2Q86WR7 435 aaPredicted RBP6.86□□□□□ -1.31
RIF1-209ENST00000467762 PANK3Q9H999 370 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 ABCA9Q8IUA7 1624 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 ZFYVE16Q7Z3T8 1539 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 MYOM2P54296 1465 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 PIK3C2GO75747 1445 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 KIF1BO60333 1816 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 KDM5AP29375 1690 aaKnown RBP6.85□□□□□ -1.31
RIF1-209ENST00000467762 PLEKHG3A1L390 1219 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 TTLL12Q14166 644 aaPredicted RBP6.85□□□□□ -1.31
RIF1-209ENST00000467762 AMHR2Q16671 573 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 NBPF1Q3BBV0 1214 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 GRIPAP1Q4V328 841 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 SPRYD7Q5W111 196 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 FCF1Q9Y324 198 aaKnown RBP6.85□□□□□ -1.31
RIF1-209ENST00000467762 SALL2Q9Y467 1007 aaPredicted RBP6.85□□□□□ -1.31
RIF1-209ENST00000467762 CFAP74Q9C0B2 1584 aa6.85□□□□□ -1.31
RIF1-209ENST00000467762 INO80Q9ULG1 1556 aaPredicted RBP6.85□□□□□ -1.31
RIF1-209ENST00000467762 NRG2O14511 850 aaPredicted RBP6.84□□□□□ -1.31
RIF1-209ENST00000467762 AAMPQ13685 434 aa6.84□□□□□ -1.31
RIF1-209ENST00000467762 MSS51Q4VC12 460 aa6.84□□□□□ -1.31
RIF1-209ENST00000467762 GIGYF2Q6Y7W6 1299 aaKnown RBP6.84□□□□□ -1.31
RIF1-209ENST00000467762 IPO9Q96P70 1041 aaKnown RBP6.84□□□□□ -1.31
RIF1-209ENST00000467762 PDZRN3Q9UPQ7 1066 aa6.84□□□□□ -1.31
RIF1-209ENST00000467762 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
RIF1-209ENST00000467762 ATP7AQ04656 1500 aa6.84□□□□□ -1.31
RIF1-209ENST00000467762 LMTK2Q8IWU2 1503 aa6.84□□□□□ -1.31
RIF1-209ENST00000467762 ASXL1Q8IXJ9 1541 aa6.84□□□□□ -1.31
RIF1-209ENST00000467762 TRAPPC8Q9Y2L5 1435 aa6.84□□□□□ -1.32
RIF1-209ENST00000467762 DISP3Q9P2K9 1392 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 SBNO2Q9Y2G9 1366 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 SETBP1Q9Y6X0 1596 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 SSTR3P32745 418 aaPredicted RBP6.83□□□□□ -1.32
RIF1-209ENST00000467762 USP46P62068 366 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 IRF5Q13568 498 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 LAPTM4AQ15012 233 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 WDR43Q15061 677 aaKnown RBP eCLIP6.83□□□□□ -1.32
RIF1-209ENST00000467762 ZNF697Q5TEC3 545 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 GOPCQ9HD26 462 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 MYO3AQ8NEV4 1616 aa6.83□□□□□ -1.32
RIF1-209ENST00000467762 RPGRIP1LQ68CZ1 1315 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 FANCAO15360 1455 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 Q3C1V9 767 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
RIF1-209ENST00000467762 PARP9Q8IXQ6 854 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
RIF1-209ENST00000467762 AMOTL2Q9Y2J4 779 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 CLTCL1P53675 1640 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 MAP3K4Q9Y6R4 1608 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 ERCC6L2Q5T890 1561 aa6.82□□□□□ -1.32
RIF1-209ENST00000467762 IFT172Q9UG01 1749 aa6.81□□□□□ -1.32
RIF1-209ENST00000467762 PPP2R1AP30153 589 aa6.81□□□□□ -1.32
RIF1-209ENST00000467762 MCM6Q14566 821 aa6.81□□□□□ -1.32
RIF1-209ENST00000467762 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
RIF1-209ENST00000467762 SYMPKQ92797 1274 aaKnown RBP6.81□□□□□ -1.32
RIF1-209ENST00000467762 NINLQ9Y2I6 1382 aa6.81□□□□□ -1.32
RIF1-209ENST00000467762 NRXN1Q9ULB1 1477 aa6.8□□□□□ -1.32
RIF1-209ENST00000467762 CC2D1BQ5T0F9 858 aaKnown RBP6.8□□□□□ -1.32
RIF1-209ENST00000467762 SPIRE2Q8WWL2 714 aa6.8□□□□□ -1.32
RIF1-209ENST00000467762 USB1Q9BQ65 265 aaKnown RBP6.8□□□□□ -1.32
RIF1-209ENST00000467762 EFCAB6Q5THR3 1501 aa6.8□□□□□ -1.32
RIF1-209ENST00000467762 ADGRL1O94910 1474 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 ZNF518AQ6AHZ1 1483 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 TNFRSF10AO00220 468 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 GDF9O60383 454 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 DXOO77932 396 aaKnown RBP6.79□□□□□ -1.32
RIF1-209ENST00000467762 MMP16P51512 607 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 CENPQQ7L2Z9 268 aaPredicted RBP6.79□□□□□ -1.32
RIF1-209ENST00000467762 TRMT2AQ8IZ69 625 aaKnown RBP6.79□□□□□ -1.32
RIF1-209ENST00000467762 EXOC6Q8TAG9 804 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 PCDHGC3Q9UN70 934 aa6.79□□□□□ -1.32
RIF1-209ENST00000467762 ZNF521Q96K83 1311 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 MYOM1P52179 1685 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 MOXD2PA6NHM9 499 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 PPM1GO15355 546 aaPredicted RBP6.78□□□□□ -1.32
RIF1-209ENST00000467762 FDX1P10109 184 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 NDUFV2P19404 249 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 KCNA1Q09470 495 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 FAM177A1Q8N128 213 aaPredicted RBP6.78□□□□□ -1.32
RIF1-209ENST00000467762 AFAP1Q8N556 730 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 BEGAINQ9BUH8 593 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 BACH2Q9BYV9 841 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 USP32Q8NFA0 1604 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 POLR3AO14802 1390 aaPredicted RBP6.78□□□□□ -1.32
RIF1-209ENST00000467762 MLH3Q9UHC1 1453 aa6.78□□□□□ -1.32
RIF1-209ENST00000467762 MROH1Q8NDA8 1641 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 KIF3BO15066 747 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 RPIAP49247 311 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 PRR20EP86478 221 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 PRR20CP86479 221 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 PRR20DP86480 221 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 PRR20BP86481 221 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 PRR20AP86496 221 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 SLFN5Q08AF3 891 aa6.77□□□□□ -1.33
RIF1-209ENST00000467762 CNGB1Q14028 1251 aaPredicted RBP6.77□□□□□ -1.33
RIF1-209ENST00000467762 RTL5Q5HYW3 569 aaPredicted RBP6.77□□□□□ -1.33
RIF1-209ENST00000467762 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms