RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 SAFB2Q14151 953 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 CDC37Q16543 378 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 LONRF1Q17RB8 773 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 RPAINQ86UA6 219 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 ANAPC4Q9UJX5 808 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 TERF1P54274 439 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 PDCL3Q9H2J4 239 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 PEX19P40855 299 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 ODR4Q5SWX8 454 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 PPP1R18Q6NYC8 613 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 ARPC5LQ9BPX5 153 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
SPTBN1-204ENST00000467371 TONSLQ96HA7 1378 aa9.4□□□□□ -0.91
SPTBN1-204ENST00000467371 RAVER1Q8IY67 606 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 GJC2Q5T442 439 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 A6NJY4 79 aa9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 TNFRSF10BO14763 440 aa9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 NOL7Q9UMY1 257 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-204ENST00000467371 SMAPO00193 183 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 HIP1RO75146 1068 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 LARP6Q9BRS8 491 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 SLC45A1Q9Y2W3 748 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 FLT3P36888 993 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 SERPINB4P48594 390 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 ENOX2Q16206 610 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 LARP1BQ659C4 914 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 USP5P45974 858 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 CBLBQ13191 982 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 SAMD3Q8N6K7 520 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 TSR2Q969E8 191 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 CEP89Q96ST8 783 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 RAI14Q9P0K7 980 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 LZTS1Q9Y250 596 aa9.38□□□□□ -0.91
SPTBN1-204ENST00000467371 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 TMEM164Q5U3C3 297 aa9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 TGIF2Q9GZN2 237 aa9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 POLA1P09884 1462 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 MAP2K1Q02750 393 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 MPHOSPH6Q99547 160 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 ALDH8A1Q9H2A2 487 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 AQRO60306 1485 aaKnown RBP eCLIP9.37□□□□□ -0.916e-8■■■■□ 23.7
SPTBN1-204ENST00000467371 AKNAQ7Z591 1439 aa9.37□□□□□ -0.91
SPTBN1-204ENST00000467371 DCAF8Q5TAQ9 597 aa9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 CC2D1AQ6P1N0 951 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 PPM1EQ8WY54 764 aa9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 ZNF644Q9H582 1327 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 PSMC1P62191 440 aaKnown RBP9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 SYCP2LQ5T4T6 812 aa9.36□□□□□ -0.91
SPTBN1-204ENST00000467371 LRRC9Q6ZRR7 1453 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 PPP1R12AO14974 1030 aaPredicted RBP9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 ELOAQ14241 798 aaKnown RBP9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 EID1Q9Y6B2 187 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 XRCC5P13010 732 aaKnown RBP9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 FRMD6Q96NE9 622 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 CXorf56Q9H5V9 222 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
SPTBN1-204ENST00000467371 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 FHAD1B1AJZ9 1412 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 GNPATO15228 680 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 MTA2O94776 668 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 TOPBP1Q92547 1522 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 CHPFQ8IZ52 775 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 STK32AQ8WU08 396 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 CHMP7Q8WUX9 453 aaPredicted RBP9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 SMC3Q9UQE7 1217 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
SPTBN1-204ENST00000467371 TPM2P07951 284 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 PDXDC1Q6P996 788 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 CLK1P49759 484 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 NYAP1Q6ZVC0 841 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 RNASEH2AO75792 299 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 SSR1P43307 286 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 TNNI2P48788 182 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 RGS3P49796 1198 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 MYSM1Q5VVJ2 828 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 PPP2R2DQ66LE6 453 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 FRS2Q8WU20 508 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 ACBD3Q9H3P7 528 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 ACAD8Q9UKU7 415 aa9.33□□□□□ -0.92
SPTBN1-204ENST00000467371 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms