RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 POTECB2RU33 542 aa9.27□□□□□ -0.93
PTPRE-206ENST00000467366 HMGB2P26583 209 aaKnown RBP9.27□□□□□ -0.93
PTPRE-206ENST00000467366 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
PTPRE-206ENST00000467366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTPRE-206ENST00000467366 HOMEZQ8IX15 550 aa9.27□□□□□ -0.93
PTPRE-206ENST00000467366 LINC00116Q8NCU8 138 aa9.27□□□□□ -0.93
PTPRE-206ENST00000467366 CCDC88AQ3V6T2 1871 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 KDM6AO15550 1401 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-206ENST00000467366 GLTPD2A6NH11 291 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 HSPA8P11142 646 aaKnown RBP9.26□□□□□ -0.93
PTPRE-206ENST00000467366 RASSF7Q02833 373 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 NME9Q86XW9 330 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 WBP1LQ9NX94 342 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 PIM2Q9P1W9 311 aa9.26□□□□□ -0.93
PTPRE-206ENST00000467366 GNPATO15228 680 aa9.25□□□□□ -0.93
PTPRE-206ENST00000467366 VEGFBP49765 207 aa9.25□□□□□ -0.93
PTPRE-206ENST00000467366 IP6K1Q92551 441 aa9.25□□□□□ -0.93
PTPRE-206ENST00000467366 ZC3H4Q9UPT8 1303 aaKnown RBP9.25□□□□□ -0.93
PTPRE-206ENST00000467366 DALRD3Q5D0E6 543 aaKnown RBP9.24□□□□□ -0.93
PTPRE-206ENST00000467366 POTEIP0CG38 1075 aa9.23□□□□□ -0.93
PTPRE-206ENST00000467366 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
PTPRE-206ENST00000467366 TMF1P82094 1093 aa9.23□□□□□ -0.93
PTPRE-206ENST00000467366 ITPK1Q13572 414 aa9.23□□□□□ -0.93
PTPRE-206ENST00000467366 NLGN1Q8N2Q7 840 aa9.23□□□□□ -0.93
PTPRE-206ENST00000467366 SMARCC1Q92922 1105 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-206ENST00000467366 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
PTPRE-206ENST00000467366 CHRNA5P30532 468 aa9.22□□□□□ -0.93
PTPRE-206ENST00000467366 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
PTPRE-206ENST00000467366 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
PTPRE-206ENST00000467366 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
PTPRE-206ENST00000467366 CD163L1Q9NR16 1453 aa9.21□□□□□ -0.93
PTPRE-206ENST00000467366 LOC102724428A0A0B4J2F2 783 aa9.21□□□□□ -0.94
PTPRE-206ENST00000467366 GYS1P13807 737 aa9.21□□□□□ -0.94
PTPRE-206ENST00000467366 SIK1P57059 783 aa9.21□□□□□ -0.94
PTPRE-206ENST00000467366 USHBP1Q8N6Y0 703 aa9.21□□□□□ -0.94
PTPRE-206ENST00000467366 PIGBQ92521 554 aa9.21□□□□□ -0.94
PTPRE-206ENST00000467366 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
PTPRE-206ENST00000467366 LMNB1P20700 586 aa9.2□□□□□ -0.94
PTPRE-206ENST00000467366 HOXC9P31274 260 aa9.2□□□□□ -0.94
PTPRE-206ENST00000467366 TRAPPC3LQ5T215 181 aa9.2□□□□□ -0.94
PTPRE-206ENST00000467366 NBPF6Q5VWK0 638 aa9.2□□□□□ -0.94
PTPRE-206ENST00000467366 NBPF4Q96M43 638 aa9.2□□□□□ -0.94
PTPRE-206ENST00000467366 PASKQ96RG2 1323 aa9.2□□□□□ -0.94
PTPRE-206ENST00000467366 CYP27B1O15528 508 aa9.19□□□□□ -0.94
PTPRE-206ENST00000467366 FBLN1P23142 703 aa9.19□□□□□ -0.94
PTPRE-206ENST00000467366 ATP6V1AP38606 617 aa9.19□□□□□ -0.94
PTPRE-206ENST00000467366 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
PTPRE-206ENST00000467366 CGNL1Q0VF96 1302 aa9.19□□□□□ -0.94
PTPRE-206ENST00000467366 PCDH11XQ9BZA7 1347 aa9.19□□□□□ -0.94
PTPRE-206ENST00000467366 PCDH11YQ9BZA8 1340 aa9.19□□□□□ -0.94
PTPRE-206ENST00000467366 COL5A3P25940 1745 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-206ENST00000467366 TATP17735 454 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-206ENST00000467366 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
PTPRE-206ENST00000467366 THSD7BQ9C0I4 1608 aa9.18□□□□□ -0.94
PTPRE-206ENST00000467366 DLEC1Q9Y238 1755 aa9.18□□□□□ -0.94
PTPRE-206ENST00000467366 RTCBQ9Y3I0 505 aaKnown RBP9.18□□□□□ -0.94
PTPRE-206ENST00000467366 DICER1Q9UPY3 1922 aaKnown RBP9.17□□□□□ -0.94
PTPRE-206ENST00000467366 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
PTPRE-206ENST00000467366 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
PTPRE-206ENST00000467366 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
PTPRE-206ENST00000467366 ASAP1Q9ULH1 1129 aa9.17□□□□□ -0.94
PTPRE-206ENST00000467366 NFKBIEO00221 500 aa9.16□□□□□ -0.94
PTPRE-206ENST00000467366 MAP2K1Q02750 393 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-206ENST00000467366 DDR1Q08345 913 aa9.16□□□□□ -0.94
PTPRE-206ENST00000467366 ZNF831Q5JPB2 1677 aa9.16□□□□□ -0.94
PTPRE-206ENST00000467366 EDC4Q6P2E9 1401 aaKnown RBP9.15□□□□□ -0.94
PTPRE-206ENST00000467366 WDR33Q9C0J8 1336 aaKnown RBP9.15□□□□□ -0.94
PTPRE-206ENST00000467366 LTBP1Q14766 1721 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 RASSF10A6NK89 507 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-206ENST00000467366 RFC4P35249 363 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 AMPHP49418 695 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 DEFB115Q30KQ5 88 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 MCOLN1Q9GZU1 580 aa9.15□□□□□ -0.94
PTPRE-206ENST00000467366 AFDNP55196 1824 aaKnown RBP9.15□□□□□ -0.95
PTPRE-206ENST00000467366 KDRP35968 1356 aa9.14□□□□□ -0.95
PTPRE-206ENST00000467366 RAB3GAP2Q9H2M9 1393 aa9.14□□□□□ -0.95
PTPRE-206ENST00000467366 RPS6KA4O75676 772 aa9.14□□□□□ -0.95
PTPRE-206ENST00000467366 ADRA2BP18089 450 aa9.14□□□□□ -0.95
PTPRE-206ENST00000467366 FKBP8Q14318 412 aa9.14□□□□□ -0.95
PTPRE-206ENST00000467366 SRP68Q9UHB9 627 aaKnown RBP9.14□□□□□ -0.95
PTPRE-206ENST00000467366 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
PTPRE-206ENST00000467366 MYH14Q7Z406 1995 aaKnown RBP9.13□□□□□ -0.95
PTPRE-206ENST00000467366 DDNO94850 711 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-206ENST00000467366 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
PTPRE-206ENST00000467366 PRPF38BQ5VTL8 546 aaKnown RBP9.13□□□□□ -0.95
PTPRE-206ENST00000467366 ATG3Q9NT62 314 aa9.13□□□□□ -0.95
PTPRE-206ENST00000467366 TMOD3Q9NYL9 352 aa9.13□□□□□ -0.95
PTPRE-206ENST00000467366 ADAMTSL1Q8N6G6 1762 aa9.13□□□□□ -0.95
PTPRE-206ENST00000467366 ADAMTS7Q9UKP4 1686 aa9.13□□□□□ -0.95
PTPRE-206ENST00000467366 FER1L6Q2WGJ9 1857 aa9.13□□□□□ -0.95
PTPRE-206ENST00000467366 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
PTPRE-206ENST00000467366 SCN4AP35499 1836 aa9.12□□□□□ -0.95
PTPRE-206ENST00000467366 NRXN2Q9P2S2 1712 aa9.12□□□□□ -0.95
PTPRE-206ENST00000467366 POLRMTO00411 1230 aaKnown RBP9.12□□□□□ -0.95
PTPRE-206ENST00000467366 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
PTPRE-206ENST00000467366 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-206ENST00000467366 LDHDQ86WU2 507 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms