RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 POTECB2RU33 542 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 ABCB7O75027 752 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 C1QBPQ07021 282 aaKnown RBP6.21□□□□□ -1.42
CPS1-205ENST00000467353 TMEM132AQ24JP5 1023 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 NBPF1Q3BBV0 1214 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 ZCRB1Q8TBF4 217 aaKnown RBP6.21□□□□□ -1.42
CPS1-205ENST00000467353 LTV1Q96GA3 475 aaPredicted RBP6.21□□□□□ -1.42
CPS1-205ENST00000467353 CREBZFQ9NS37 354 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 WBP1LQ9NX94 342 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 DAXXQ9UER7 740 aaPredicted RBP6.21□□□□□ -1.42
CPS1-205ENST00000467353 ITSN1Q15811 1721 aa6.21□□□□□ -1.42
CPS1-205ENST00000467353 NFAT5O94916 1531 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 VEGFBP49765 207 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 AIDAQ96BJ3 306 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 DCAF5Q96JK2 942 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 STAC3Q96MF2 364 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 SSUH2Q9Y2M2 353 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 TTC21AQ8NDW8 1320 aa6.2□□□□□ -1.42
CPS1-205ENST00000467353 PALLDQ8WX93 1383 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 GLTPD2A6NH11 291 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 HSPA8P11142 646 aaKnown RBP6.19□□□□□ -1.42
CPS1-205ENST00000467353 SSFA2P28290 1259 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 DALRD3Q5D0E6 543 aaKnown RBP6.19□□□□□ -1.42
CPS1-205ENST00000467353 MPRIPQ6WCQ1 1025 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 NME9Q86XW9 330 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.19□□□□□ -1.42
CPS1-205ENST00000467353 LINC00116Q8NCU8 138 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 PIM2Q9P1W9 311 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 PIK3C2AO00443 1686 aa6.19□□□□□ -1.42
CPS1-205ENST00000467353 CNTNAP1P78357 1384 aa6.18□□□□□ -1.42
CPS1-205ENST00000467353 HMGB2P26583 209 aaKnown RBP6.18□□□□□ -1.42
CPS1-205ENST00000467353 TMF1P82094 1093 aa6.18□□□□□ -1.42
CPS1-205ENST00000467353 NLGN1Q8N2Q7 840 aa6.18□□□□□ -1.42
CPS1-205ENST00000467353 IP6K1Q92551 441 aa6.18□□□□□ -1.42
CPS1-205ENST00000467353 CENPJQ9HC77 1338 aaPredicted RBP6.18□□□□□ -1.42
CPS1-205ENST00000467353 RGPD5Q99666 1765 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 GNPATO15228 680 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 POTEIP0CG38 1075 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 POTEJP0CG39 1038 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 CHRNA5P30532 468 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 RASSF7Q02833 373 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 ITPK1Q13572 414 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 CHADLQ6NUI6 762 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 HOMEZQ8IX15 550 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 PIGBQ92521 554 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 RNF39Q9H2S5 420 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 CCDC87Q9NVE4 849 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 USP31Q70CQ4 1352 aa6.17□□□□□ -1.42
CPS1-205ENST00000467353 NSD3Q9BZ95 1437 aa6.16□□□□□ -1.42
CPS1-205ENST00000467353 LY75O60449 1722 aa6.16□□□□□ -1.42
CPS1-205ENST00000467353 LOC102724428A0A0B4J2F2 783 aa6.16□□□□□ -1.42
CPS1-205ENST00000467353 RIOK3O14730 519 aaKnown RBP6.16□□□□□ -1.42
CPS1-205ENST00000467353 SIK1P57059 783 aa6.16□□□□□ -1.42
CPS1-205ENST00000467353 SMARCC1Q92922 1105 aaPredicted RBP6.16□□□□□ -1.42
CPS1-205ENST00000467353 KTN1Q86UP2 1357 aaKnown RBP6.16□□□□□ -1.42
CPS1-205ENST00000467353 TNRC18O15417 2968 aaPredicted RBP6.15□□□□□ -1.42
CPS1-205ENST00000467353 CYP27B1O15528 508 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 GYS1P13807 737 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 LMNB1P20700 586 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 FBLN1P23142 703 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 TRAPPC3LQ5T215 181 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 NBPF6Q5VWK0 638 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.42
CPS1-205ENST00000467353 NBPF4Q96M43 638 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 PARP3Q9Y6F1 533 aa6.15□□□□□ -1.42
CPS1-205ENST00000467353 EVC2Q86UK5 1308 aa6.15□□□□□ -1.43
CPS1-205ENST00000467353 PASKQ96RG2 1323 aa6.15□□□□□ -1.43
CPS1-205ENST00000467353 ZC3H4Q9UPT8 1303 aaKnown RBP6.15□□□□□ -1.43
CPS1-205ENST00000467353 MEGF6O75095 1541 aa6.15□□□□□ -1.43
CPS1-205ENST00000467353 USP54Q70EL1 1684 aa6.14□□□□□ -1.43
CPS1-205ENST00000467353 STK25O00506 426 aa6.14□□□□□ -1.43
CPS1-205ENST00000467353 ATP6V1AP38606 617 aa6.14□□□□□ -1.43
CPS1-205ENST00000467353 ASAP1Q9ULH1 1129 aa6.14□□□□□ -1.43
CPS1-205ENST00000467353 KDM6AO15550 1401 aaPredicted RBP6.14□□□□□ -1.43
CPS1-205ENST00000467353 QRICH2Q9H0J4 1663 aa6.14□□□□□ -1.43
CPS1-205ENST00000467353 KIAA1551Q9HCM1 1747 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 TOGARAM1Q9Y4F4 1720 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 TMEM88BA6NKF7 163 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 ITGBL1O95965 494 aaPredicted RBP6.13□□□□□ -1.43
CPS1-205ENST00000467353 HOXC9P31274 260 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 MAP2K1Q02750 393 aaPredicted RBP6.13□□□□□ -1.43
CPS1-205ENST00000467353 DDR1Q08345 913 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 RTCBQ9Y3I0 505 aaKnown RBP6.13□□□□□ -1.43
CPS1-205ENST00000467353 SBNO2Q9Y2G9 1366 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 C4BP0C0L5 1744 aa6.13□□□□□ -1.43
CPS1-205ENST00000467353 NFKBIEO00221 500 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 C5P01031 1676 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 RFC4P35249 363 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 CGNL1Q0VF96 1302 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 DEFB115Q30KQ5 88 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 MAP3K19Q56UN5 1328 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 DPY19L2Q6NUT2 758 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 N4BP2Q86UW6 1770 aaPredicted RBP6.12□□□□□ -1.43
CPS1-205ENST00000467353 DOT1LQ8TEK3 1739 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 RAPGEF4Q8WZA2 1011 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 FAM212AQ96EL1 285 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 SLC4A9Q96Q91 983 aa6.12□□□□□ -1.43
CPS1-205ENST00000467353 WDR33Q9C0J8 1336 aaKnown RBP6.12□□□□□ -1.43
CPS1-205ENST00000467353 MCOLN1Q9GZU1 580 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms