RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 MSH6P52701 1360 aa18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 MAP3K5Q99683 1374 aa18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 GBP4Q96PP9 640 aa18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
PRPF38B-204ENST00000467302 RGS12O14924 1447 aa18.24■□□□□ 0.51
PRPF38B-204ENST00000467302 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
PRPF38B-204ENST00000467302 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
PRPF38B-204ENST00000467302 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
PRPF38B-204ENST00000467302 NCAPD2Q15021 1401 aa18.24■□□□□ 0.51
PRPF38B-204ENST00000467302 KDM4FA0A1W2PPD8 638 aa18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 KRT24Q2M2I5 525 aa18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 TSPYL4Q9UJ04 414 aa18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 GRPEL1Q9HAV7 217 aa18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
PRPF38B-204ENST00000467302 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 ANKRD44Q8N8A2 993 aa18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 PTMSP20962 102 aa18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 SKOR2Q2VWA4 1001 aaPredicted RBP18.22■□□□□ 0.51
PRPF38B-204ENST00000467302 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
PRPF38B-204ENST00000467302 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
PRPF38B-204ENST00000467302 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
PRPF38B-204ENST00000467302 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
PRPF38B-204ENST00000467302 HSP90AA1P07900 732 aaKnown RBP18.2■□□□□ 0.5
PRPF38B-204ENST00000467302 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
PRPF38B-204ENST00000467302 RPAP2Q8IXW5 612 aaPredicted RBP18.2■□□□□ 0.5
PRPF38B-204ENST00000467302 TNS3Q68CZ2 1445 aa18.19■□□□□ 0.5
PRPF38B-204ENST00000467302 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
PRPF38B-204ENST00000467302 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
PRPF38B-204ENST00000467302 PXDNQ92626 1479 aa18.19■□□□□ 0.5
PRPF38B-204ENST00000467302 RABEP1Q15276 862 aa18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 ABCC6O95255 1503 aa18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 GAS2L3Q86XJ1 694 aa18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
PRPF38B-204ENST00000467302 CRYBG1Q9Y4K1 1723 aa18.17■□□□□ 0.5
PRPF38B-204ENST00000467302 ANKRD24Q8TF21 1146 aa18.17■□□□□ 0.5
PRPF38B-204ENST00000467302 PTPRCP08575 1304 aa18.17■□□□□ 0.5
PRPF38B-204ENST00000467302 RGPD5Q99666 1765 aa18.17■□□□□ 0.5
PRPF38B-204ENST00000467302 SSFA2P28290 1259 aa18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 CLCN1P35523 988 aa18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 FAM208AQ9UK61 1670 aaKnown RBP18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 LRRC59Q96AG4 307 aaKnown RBP18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
PRPF38B-204ENST00000467302 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
PRPF38B-204ENST00000467302 CEMIPQ8WUJ3 1361 aa18.15■□□□□ 0.5
PRPF38B-204ENST00000467302 AMOTQ4VCS5 1084 aa18.14■□□□□ 0.49
PRPF38B-204ENST00000467302 COL18A1P39060 1754 aa18.14■□□□□ 0.49
PRPF38B-204ENST00000467302 SDSP20132 328 aa18.13■□□□□ 0.49
PRPF38B-204ENST00000467302 PLEKHO1Q53GL0 409 aaPredicted RBP18.13■□□□□ 0.49
PRPF38B-204ENST00000467302 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
PRPF38B-204ENST00000467302 MEIS3Q99687 375 aa18.13■□□□□ 0.49
PRPF38B-204ENST00000467302 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
PRPF38B-204ENST00000467302 ERBB3P21860 1342 aa18.12■□□□□ 0.49
PRPF38B-204ENST00000467302 BAG4O95429 457 aaKnown RBP18.12■□□□□ 0.49
PRPF38B-204ENST00000467302 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
PRPF38B-204ENST00000467302 CACNA1FO60840 1977 aa18.12■□□□□ 0.49
PRPF38B-204ENST00000467302 SPATA31A3Q5VYP0 1347 aa18.12■□□□□ 0.49
PRPF38B-204ENST00000467302 CYP2E1P05181 493 aaPredicted RBP18.11■□□□□ 0.49
PRPF38B-204ENST00000467302 AKAP4Q5JQC9 854 aa18.11■□□□□ 0.49
PRPF38B-204ENST00000467302 GOLGA6L22H0YM25 854 aa18.11■□□□□ 0.49
PRPF38B-204ENST00000467302 AXIN2Q9Y2T1 843 aa18.11■□□□□ 0.49
PRPF38B-204ENST00000467302 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 ZNF530Q6P9A1 599 aaPredicted RBP18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
PRPF38B-204ENST00000467302 NUCB2P80303 420 aa18.08■□□□□ 0.49
PRPF38B-204ENST00000467302 CASC1Q6TDU7 716 aa18.08■□□□□ 0.49
PRPF38B-204ENST00000467302 OSBPL3Q9H4L5 887 aa18.08■□□□□ 0.49
PRPF38B-204ENST00000467302 LGR6Q9HBX8 967 aa18.08■□□□□ 0.49
PRPF38B-204ENST00000467302 CPDO75976 1380 aa18.08■□□□□ 0.49
PRPF38B-204ENST00000467302 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.49
PRPF38B-204ENST00000467302 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.48
PRPF38B-204ENST00000467302 C1orf141Q5JVX7 400 aa18.08■□□□□ 0.48
PRPF38B-204ENST00000467302 G2E3Q7L622 706 aa18.08■□□□□ 0.48
PRPF38B-204ENST00000467302 ESPNB1AK53 854 aa18.07■□□□□ 0.48
PRPF38B-204ENST00000467302 CWC22Q9HCG8 908 aaKnown RBP18.07■□□□□ 0.48
PRPF38B-204ENST00000467302 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
PRPF38B-204ENST00000467302 N4BP2Q86UW6 1770 aaPredicted RBP18.06■□□□□ 0.48
PRPF38B-204ENST00000467302 HMMRO75330 724 aa18.06■□□□□ 0.48
PRPF38B-204ENST00000467302 REC8O95072 547 aa18.06■□□□□ 0.48
PRPF38B-204ENST00000467302 DDX49Q9Y6V7 483 aaKnown RBP18.06■□□□□ 0.48
PRPF38B-204ENST00000467302 SIPA1L3O60292 1781 aaPredicted RBP18.05■□□□□ 0.48
PRPF38B-204ENST00000467302 APBB1O00213 710 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms