RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
RRP1-201ENST00000467112 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
RRP1-201ENST00000467112 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 BRD1O95696 1058 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 FOXD4L6Q3SYB3 417 aaPredicted RBP18.2■□□□□ 0.5
RRP1-201ENST00000467112 FOXD4L3Q6VB84 417 aaPredicted RBP18.2■□□□□ 0.5
RRP1-201ENST00000467112 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
RRP1-201ENST00000467112 ACEP12821 1306 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 PNMA6EA0A0J9YXQ4 647 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
RRP1-201ENST00000467112 MAP3K19Q56UN5 1328 aa18.19■□□□□ 0.5
RRP1-201ENST00000467112 MX1P20591 662 aa18.19■□□□□ 0.5
RRP1-201ENST00000467112 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
RRP1-201ENST00000467112 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
RRP1-201ENST00000467112 SPATA31D1Q6ZQQ2 1576 aa18.19■□□□□ 0.5
RRP1-201ENST00000467112 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
RRP1-201ENST00000467112 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
RRP1-201ENST00000467112 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
RRP1-201ENST00000467112 ZNF500O60304 480 aaPredicted RBP18.18■□□□□ 0.5
RRP1-201ENST00000467112 CHMLP26374 656 aa18.18■□□□□ 0.5
RRP1-201ENST00000467112 CUL4AQ13619 759 aa18.18■□□□□ 0.5
RRP1-201ENST00000467112 MBD3O95983 291 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 MCM2P49736 904 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 MCCP23508 829 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
RRP1-201ENST00000467112 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
RRP1-201ENST00000467112 FKBP5Q13451 457 aaPredicted RBP18.16■□□□□ 0.5
RRP1-201ENST00000467112 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
RRP1-201ENST00000467112 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
RRP1-201ENST00000467112 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
RRP1-201ENST00000467112 ROBO2Q9HCK4 1378 aa18.16■□□□□ 0.5
RRP1-201ENST00000467112 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
RRP1-201ENST00000467112 FLIIQ13045 1269 aa18.15■□□□□ 0.5
RRP1-201ENST00000467112 PDCL3Q9H2J4 239 aa18.15■□□□□ 0.5
RRP1-201ENST00000467112 TECPR2O15040 1411 aa18.15■□□□□ 0.5
RRP1-201ENST00000467112 IL25Q9H293 177 aa18.15■□□□□ 0.5
RRP1-201ENST00000467112 ATP8B2P98198 1209 aa18.14■□□□□ 0.49
RRP1-201ENST00000467112 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
RRP1-201ENST00000467112 ZMYND15Q9H091 742 aa18.14■□□□□ 0.49
RRP1-201ENST00000467112 ANAPC15P60006 121 aa18.13■□□□□ 0.49
RRP1-201ENST00000467112 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
RRP1-201ENST00000467112 GADD45BO75293 160 aaPredicted RBP18.13■□□□□ 0.49
RRP1-201ENST00000467112 GNAI3P08754 354 aa18.13■□□□□ 0.49
RRP1-201ENST00000467112 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
RRP1-201ENST00000467112 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
RRP1-201ENST00000467112 TERF1P54274 439 aa18.12■□□□□ 0.49
RRP1-201ENST00000467112 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
RRP1-201ENST00000467112 USP6P35125 1406 aa18.12■□□□□ 0.49
RRP1-201ENST00000467112 TSPY26PQ9H489 355 aa18.12■□□□□ 0.49
RRP1-201ENST00000467112 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
RRP1-201ENST00000467112 ARHGEF10O15013 1369 aa18.11■□□□□ 0.49
RRP1-201ENST00000467112 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
RRP1-201ENST00000467112 EYA1Q99502 592 aa18.11■□□□□ 0.49
RRP1-201ENST00000467112 FAM13BQ9NYF5 915 aa18.11■□□□□ 0.49
RRP1-201ENST00000467112 STAP2Q9UGK3 403 aa18.11■□□□□ 0.49
RRP1-201ENST00000467112 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
RRP1-201ENST00000467112 MAP4K4O95819 1239 aaPredicted RBP18.1■□□□□ 0.49
RRP1-201ENST00000467112 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
RRP1-201ENST00000467112 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
RRP1-201ENST00000467112 TPRNQ4KMQ1 711 aa18.09■□□□□ 0.49
RRP1-201ENST00000467112 USP48Q86UV5 1035 aa18.09■□□□□ 0.49
RRP1-201ENST00000467112 UQCRHLA0A096LP55 91 aa18.09■□□□□ 0.49
RRP1-201ENST00000467112 UQCRHP07919 91 aa18.09■□□□□ 0.49
RRP1-201ENST00000467112 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
RRP1-201ENST00000467112 MCM5P33992 734 aa18.09■□□□□ 0.49
RRP1-201ENST00000467112 PTMAP06454 111 aaKnown RBP18.08■□□□□ 0.49
RRP1-201ENST00000467112 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.49
RRP1-201ENST00000467112 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.49
RRP1-201ENST00000467112 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.49
RRP1-201ENST00000467112 USP44Q9H0E7 712 aa18.08■□□□□ 0.49
RRP1-201ENST00000467112 SSH2Q76I76 1423 aa18.08■□□□□ 0.48
RRP1-201ENST00000467112 MPNDQ8N594 471 aa18.08■□□□□ 0.48
RRP1-201ENST00000467112 AMPHP49418 695 aa18.07■□□□□ 0.48
RRP1-201ENST00000467112 HSPA4P34932 840 aa18.07■□□□□ 0.48
RRP1-201ENST00000467112 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
RRP1-201ENST00000467112 LARP6Q9BRS8 491 aaKnown RBP18.07■□□□□ 0.48
RRP1-201ENST00000467112 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
RRP1-201ENST00000467112 WDR33Q9C0J8 1336 aaKnown RBP18.06■□□□□ 0.48
RRP1-201ENST00000467112 KDRP35968 1356 aa18.06■□□□□ 0.48
RRP1-201ENST00000467112 CEP170BQ9Y4F5 1589 aaPredicted RBP18.06■□□□□ 0.48
RRP1-201ENST00000467112 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
RRP1-201ENST00000467112 UBTFL1P0CB47 393 aaPredicted RBP18.06■□□□□ 0.48
RRP1-201ENST00000467112 FLT4P35916 1363 aa18.06■□□□□ 0.48
RRP1-201ENST00000467112 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
RRP1-201ENST00000467112 IL17RAQ96F46 866 aa18.06■□□□□ 0.48
RRP1-201ENST00000467112 IGSF1Q8N6C5 1336 aa18.05■□□□□ 0.48
RRP1-201ENST00000467112 TCHHQ07283 1943 aa18.05■□□□□ 0.48
RRP1-201ENST00000467112 PKNOX2Q96KN3 472 aa18.05■□□□□ 0.48
RRP1-201ENST00000467112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
RRP1-201ENST00000467112 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
RRP1-201ENST00000467112 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
RRP1-201ENST00000467112 SOS1Q07889 1333 aaPredicted RBP18.04■□□□□ 0.48
RRP1-201ENST00000467112 SURF6O75683 361 aaKnown RBP18.04■□□□□ 0.48
RRP1-201ENST00000467112 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
RRP1-201ENST00000467112 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms