RNA–Protein interactions for RNA: ENST00000467061.1

TMEM41A-204, Transcript of transmembrane protein 41A, humanhuman

TSL 2

Gene TMEM41A, Length 4,921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-204ENST00000467061 SMARCA5O60264 1052 aaPredicted RBP18.52■□□□□ 0.55
TMEM41A-204ENST00000467061 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 MBIPQ9NS73 344 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 UHRF1BP1Q6BDS2 1440 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 SYCE3A1L190 88 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 STIM1Q13586 685 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 EPS15P42566 896 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 INSRP06213 1382 aa18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM41A-204ENST00000467061 KIF2AO00139 706 aaPredicted RBP18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 STRN4Q9NRL3 753 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
TMEM41A-204ENST00000467061 NOM1Q5C9Z4 860 aaKnown RBP18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 ZNHIT6Q9NWK9 470 aaKnown RBP18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 PPFIBP1Q86W92 1011 aa18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 TXLNBQ8N3L3 684 aa18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 RRP9O43818 475 aaKnown RBP18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 CDK5RAP3Q96JB5 506 aa18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 CWC15Q9P013 229 aaKnown RBP18.49■□□□□ 0.55
TMEM41A-204ENST00000467061 A2MP01023 1474 aa18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 LUC7LQ9NQ29 371 aaKnown RBP18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 DNMT1P26358 1616 aaKnown RBP18.48■□□□□ 0.55
TMEM41A-204ENST00000467061 CTAGE5O15320 804 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 SSFA2P28290 1259 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 F6X3S4 739 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 STARD3NLO95772 234 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 MCM5P33992 734 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 PDE4CQ08493 712 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 KLHL40Q2TBA0 621 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 FBXO31Q5XUX0 539 aaPredicted RBP18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
TMEM41A-204ENST00000467061 ZNF518AQ6AHZ1 1483 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 MYO6Q9UM54 1294 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 CEP131Q9UPN4 1083 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 PCDHB15Q9Y5E8 787 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 UQCRHLA0A096LP55 91 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 UQCRHP07919 91 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 SNX21Q969T3 373 aa18.46■□□□□ 0.55
TMEM41A-204ENST00000467061 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
TMEM41A-204ENST00000467061 CCAR1Q8IX12 1150 aaKnown RBP18.45■□□□□ 0.54
TMEM41A-204ENST00000467061 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
TMEM41A-204ENST00000467061 COL17A1Q9UMD9 1497 aaPredicted RBP18.45■□□□□ 0.54
TMEM41A-204ENST00000467061 ANO10Q9NW15 660 aa18.45■□□□□ 0.54
TMEM41A-204ENST00000467061 ANAPC15P60006 121 aa18.45■□□□□ 0.54
TMEM41A-204ENST00000467061 DDX19AQ9NUU7 478 aaKnown RBP18.45■□□□□ 0.54
TMEM41A-204ENST00000467061 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 TDO2P48775 406 aa18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 BAG4O95429 457 aaKnown RBP18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 CAVIN2O95810 425 aa18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 PZPP20742 1482 aa18.44■□□□□ 0.54
TMEM41A-204ENST00000467061 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
TMEM41A-204ENST00000467061 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
TMEM41A-204ENST00000467061 HMG20BQ9P0W2 317 aa18.43■□□□□ 0.54
TMEM41A-204ENST00000467061 CCDC196A0A1B0GTZ2 297 aa18.43■□□□□ 0.54
TMEM41A-204ENST00000467061 AIDAQ96BJ3 306 aa18.43■□□□□ 0.54
TMEM41A-204ENST00000467061 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 ERLIN1O75477 346 aa18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 HSP90AB3PQ58FF7 597 aa18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 MEX3CQ5U5Q3 659 aaKnown RBP18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 IGHMBP2P38935 993 aaKnown RBP18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 UVSSAQ2YD98 709 aa18.42■□□□□ 0.54
TMEM41A-204ENST00000467061 CT47A1Q5JQC4 288 aaPredicted RBP18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 ACEP12821 1306 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 MYD88Q99836 296 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 SOGA3Q5TF21 947 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 NEMFO60524 1076 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 KDM4AO75164 1064 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
TMEM41A-204ENST00000467061 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
TMEM41A-204ENST00000467061 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
TMEM41A-204ENST00000467061 FILIP1Q7Z7B0 1213 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms