RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
UBA3-209ENST00000466763 TEFQ10587 303 aa18.34■□□□□ 0.53
UBA3-209ENST00000466763 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
UBA3-209ENST00000466763 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
UBA3-209ENST00000466763 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
UBA3-209ENST00000466763 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
UBA3-209ENST00000466763 DCTN1Q14203 1278 aa18.33■□□□□ 0.52
UBA3-209ENST00000466763 MCM10Q7L590 875 aa18.33■□□□□ 0.52
UBA3-209ENST00000466763 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
UBA3-209ENST00000466763 PROM2Q8N271 834 aa18.33■□□□□ 0.52
UBA3-209ENST00000466763 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
UBA3-209ENST00000466763 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
UBA3-209ENST00000466763 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
UBA3-209ENST00000466763 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
UBA3-209ENST00000466763 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
UBA3-209ENST00000466763 KCNQ4P56696 695 aa18.32■□□□□ 0.52
UBA3-209ENST00000466763 RIPK4P57078 832 aa18.32■□□□□ 0.52
UBA3-209ENST00000466763 NBPF14Q5TI25 921 aa18.31■□□□□ 0.52
UBA3-209ENST00000466763 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
UBA3-209ENST00000466763 ATG3Q9NT62 314 aa18.31■□□□□ 0.52
UBA3-209ENST00000466763 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
UBA3-209ENST00000466763 DLG5Q8TDM6 1919 aa18.3■□□□□ 0.52
UBA3-209ENST00000466763 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
UBA3-209ENST00000466763 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
UBA3-209ENST00000466763 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
UBA3-209ENST00000466763 SLC27A3Q5K4L6 730 aa18.29■□□□□ 0.52
UBA3-209ENST00000466763 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
UBA3-209ENST00000466763 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
UBA3-209ENST00000466763 APAF1O14727 1248 aa18.28■□□□□ 0.52
UBA3-209ENST00000466763 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
UBA3-209ENST00000466763 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
UBA3-209ENST00000466763 MIER1Q8N108 512 aa18.28■□□□□ 0.52
UBA3-209ENST00000466763 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
UBA3-209ENST00000466763 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
UBA3-209ENST00000466763 RREB1Q92766 1687 aa18.27■□□□□ 0.52
UBA3-209ENST00000466763 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 PSDA5PKW4 1024 aaPredicted RBP18.26■□□□□ 0.51
UBA3-209ENST00000466763 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 SIK1P57059 783 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 LY75O60449 1722 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
UBA3-209ENST00000466763 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
UBA3-209ENST00000466763 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
UBA3-209ENST00000466763 R3HDM1Q15032 1099 aaKnown RBP18.25■□□□□ 0.51
UBA3-209ENST00000466763 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
UBA3-209ENST00000466763 ADAMTS7Q9UKP4 1686 aa18.25■□□□□ 0.51
UBA3-209ENST00000466763 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
UBA3-209ENST00000466763 MRC1P22897 1456 aa18.24■□□□□ 0.51
UBA3-209ENST00000466763 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
UBA3-209ENST00000466763 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
UBA3-209ENST00000466763 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
UBA3-209ENST00000466763 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
UBA3-209ENST00000466763 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
UBA3-209ENST00000466763 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
UBA3-209ENST00000466763 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
UBA3-209ENST00000466763 KCNQ3O43525 872 aa18.2■□□□□ 0.5
UBA3-209ENST00000466763 CAPN15O75808 1086 aa18.2■□□□□ 0.5
UBA3-209ENST00000466763 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
UBA3-209ENST00000466763 ITPK1Q13572 414 aa18.2■□□□□ 0.5
UBA3-209ENST00000466763 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
UBA3-209ENST00000466763 SIPA1L3O60292 1781 aaPredicted RBP18.19■□□□□ 0.5
UBA3-209ENST00000466763 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
UBA3-209ENST00000466763 AK7Q96M32 723 aa18.19■□□□□ 0.5
UBA3-209ENST00000466763 SLC4A9Q96Q91 983 aa18.19■□□□□ 0.5
UBA3-209ENST00000466763 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
UBA3-209ENST00000466763 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
UBA3-209ENST00000466763 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
UBA3-209ENST00000466763 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
UBA3-209ENST00000466763 DNAJC10Q8IXB1 793 aa18.17■□□□□ 0.5
UBA3-209ENST00000466763 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
UBA3-209ENST00000466763 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
UBA3-209ENST00000466763 C5P01031 1676 aa18.17■□□□□ 0.5
UBA3-209ENST00000466763 TSPYL4Q9UJ04 414 aa18.16■□□□□ 0.5
UBA3-209ENST00000466763 PAPPAQ13219 1627 aa18.16■□□□□ 0.5
UBA3-209ENST00000466763 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.49
UBA3-209ENST00000466763 GNPATO15228 680 aa18.14■□□□□ 0.49
UBA3-209ENST00000466763 PHF14O94880 888 aa18.14■□□□□ 0.49
UBA3-209ENST00000466763 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
UBA3-209ENST00000466763 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
UBA3-209ENST00000466763 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
UBA3-209ENST00000466763 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
UBA3-209ENST00000466763 HEG1Q9ULI3 1381 aa18.13■□□□□ 0.49
UBA3-209ENST00000466763 STARD3NLO95772 234 aa18.12■□□□□ 0.49
UBA3-209ENST00000466763 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
UBA3-209ENST00000466763 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
UBA3-209ENST00000466763 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
UBA3-209ENST00000466763 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
UBA3-209ENST00000466763 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
UBA3-209ENST00000466763 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
UBA3-209ENST00000466763 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
UBA3-209ENST00000466763 TJP1Q07157 1748 aa18.1■□□□□ 0.49
UBA3-209ENST00000466763 ZNF831Q5JPB2 1677 aa18.1■□□□□ 0.49
UBA3-209ENST00000466763 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
UBA3-209ENST00000466763 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
UBA3-209ENST00000466763 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
UBA3-209ENST00000466763 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
UBA3-209ENST00000466763 RC3H1Q5TC82 1133 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms